RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 COL20A1Q9P218 1284 aa16.82■□□□□ 0.28
CSRP1-201ENST00000340006 TCHHQ07283 1943 aa16.81■□□□□ 0.28
CSRP1-201ENST00000340006 PTPREP23469 700 aa16.81■□□□□ 0.28
CSRP1-201ENST00000340006 ZNF76P36508 570 aa16.81■□□□□ 0.28
CSRP1-201ENST00000340006 DNM1Q05193 864 aaKnown RBP16.81■□□□□ 0.28
CSRP1-201ENST00000340006 LETM2Q2VYF4 491 aa16.81■□□□□ 0.28
CSRP1-201ENST00000340006 DNAJC5GQ8N7S2 189 aa16.81■□□□□ 0.28
CSRP1-201ENST00000340006 NSUN6Q8TEA1 469 aaKnown RBP16.81■□□□□ 0.28
CSRP1-201ENST00000340006 RBBP6Q7Z6E9 1792 aaKnown RBP16.81■□□□□ 0.28
CSRP1-201ENST00000340006 MYH7BA7E2Y1 1941 aa16.81■□□□□ 0.28
CSRP1-201ENST00000340006 DOCK3Q8IZD9 2030 aa16.81■□□□□ 0.28
CSRP1-201ENST00000340006 TNPO2O14787 897 aaKnown RBP16.8■□□□□ 0.28
CSRP1-201ENST00000340006 CCNT1O60563 726 aaKnown RBP16.8■□□□□ 0.28
CSRP1-201ENST00000340006 EIF2AK2P19525 551 aaKnown RBP16.8■□□□□ 0.28
CSRP1-201ENST00000340006 ADORA2AP29274 412 aa16.8■□□□□ 0.28
CSRP1-201ENST00000340006 PSMC4P43686 418 aa16.8■□□□□ 0.28
CSRP1-201ENST00000340006 GHRHRQ02643 423 aa16.8■□□□□ 0.28
CSRP1-201ENST00000340006 NEK8Q86SG6 692 aa16.8■□□□□ 0.28
CSRP1-201ENST00000340006 CHAMP1Q96JM3 812 aa16.8■□□□□ 0.28
CSRP1-201ENST00000340006 CFHR5Q9BXR6 569 aa16.8■□□□□ 0.28
CSRP1-201ENST00000340006 ADD3Q9UEY8 706 aaKnown RBP16.8■□□□□ 0.28
CSRP1-201ENST00000340006 CFAP45Q9UL16 551 aa16.8■□□□□ 0.28
CSRP1-201ENST00000340006 MYCLP12524 364 aaPredicted RBP16.8■□□□□ 0.28
CSRP1-201ENST00000340006 FCGRTP55899 365 aa16.8■□□□□ 0.28
CSRP1-201ENST00000340006 ABRAQ8N0Z2 381 aa16.8■□□□□ 0.28
CSRP1-201ENST00000340006 PXMP2Q9NR77 195 aa16.8■□□□□ 0.28
CSRP1-201ENST00000340006 PLXNB2O15031 1838 aa16.8■□□□□ 0.28
CSRP1-201ENST00000340006 GPR25O00155 361 aa16.79■□□□□ 0.28
CSRP1-201ENST00000340006 TOB1P50616 345 aaPredicted RBP16.79■□□□□ 0.28
CSRP1-201ENST00000340006 USP11P51784 963 aa16.79■□□□□ 0.28
CSRP1-201ENST00000340006 LACTBP83111 547 aaPredicted RBP16.79■□□□□ 0.28
CSRP1-201ENST00000340006 ARHGAP4P98171 946 aa16.79■□□□□ 0.28
CSRP1-201ENST00000340006 ZNF174Q15697 407 aa16.79■□□□□ 0.28
CSRP1-201ENST00000340006 DNERQ8NFT8 737 aa16.79■□□□□ 0.28
CSRP1-201ENST00000340006 SAGE1Q9NXZ1 904 aa16.79■□□□□ 0.28
CSRP1-201ENST00000340006 SLC5A4Q9NY91 659 aa16.79■□□□□ 0.28
CSRP1-201ENST00000340006 SLC15A5A6NIM6 579 aa16.78■□□□□ 0.28
CSRP1-201ENST00000340006 B4DLN1 442 aa16.78■□□□□ 0.28
CSRP1-201ENST00000340006 MCM7P33993 719 aa16.78■□□□□ 0.28
CSRP1-201ENST00000340006 SREBF1P36956 1147 aa16.78■□□□□ 0.28
CSRP1-201ENST00000340006 TRAPPC10P48553 1259 aa16.78■□□□□ 0.28
CSRP1-201ENST00000340006 TTC38Q5R3I4 469 aa16.78■□□□□ 0.28
CSRP1-201ENST00000340006 ZFP91Q96JP5 570 aaPredicted RBP16.78■□□□□ 0.28
CSRP1-201ENST00000340006 MPHOSPH6Q99547 160 aaKnown RBP16.78■□□□□ 0.28
CSRP1-201ENST00000340006 NUDT12Q9BQG2 462 aa16.78■□□□□ 0.28
CSRP1-201ENST00000340006 TSKSQ9UJT2 592 aa16.78■□□□□ 0.28
CSRP1-201ENST00000340006 DDX11L8A8MPP1 907 aa16.78■□□□□ 0.28
CSRP1-201ENST00000340006 GOLGA6L22H0YM25 854 aa16.78■□□□□ 0.28
CSRP1-201ENST00000340006 KRT85P78386 507 aa16.78■□□□□ 0.28
CSRP1-201ENST00000340006 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.78■□□□□ 0.28
CSRP1-201ENST00000340006 RTEL1Q9NZ71 1219 aa16.78■□□□□ 0.28
CSRP1-201ENST00000340006 PCDHB6Q9Y5E3 794 aa16.78■□□□□ 0.28
CSRP1-201ENST00000340006 MGAMO43451 1857 aa16.78■□□□□ 0.28
CSRP1-201ENST00000340006 MYH15Q9Y2K3 1946 aa16.77■□□□□ 0.28
CSRP1-201ENST00000340006 SOWAHBA6NEL2 793 aa16.77■□□□□ 0.28
CSRP1-201ENST00000340006 COBLO75128 1261 aa16.77■□□□□ 0.28
CSRP1-201ENST00000340006 NR3C2P08235 984 aa16.77■□□□□ 0.28
CSRP1-201ENST00000340006 GRB14Q14449 540 aa16.77■□□□□ 0.28
CSRP1-201ENST00000340006 PGM5Q15124 567 aa16.77■□□□□ 0.28
CSRP1-201ENST00000340006 SF3A1Q15459 793 aaKnown RBP16.77■□□□□ 0.28
CSRP1-201ENST00000340006 ATL3Q6DD88 541 aa16.77■□□□□ 0.28
CSRP1-201ENST00000340006 FAM133AQ8N9E0 248 aa16.77■□□□□ 0.28
CSRP1-201ENST00000340006 IWS1Q96ST2 819 aa16.77■□□□□ 0.28
CSRP1-201ENST00000340006 ARHGAP39Q9C0H5 1083 aa16.77■□□□□ 0.28
CSRP1-201ENST00000340006 CLIC4Q9Y696 253 aa16.77■□□□□ 0.28
CSRP1-201ENST00000340006 DNAJC25-GNG10A0A024R161 153 aa16.77■□□□□ 0.27
CSRP1-201ENST00000340006 MARCH6O60337 910 aa16.77■□□□□ 0.27
CSRP1-201ENST00000340006 CCND2P30279 289 aa16.77■□□□□ 0.27
CSRP1-201ENST00000340006 ANO1Q5XXA6 986 aa16.77■□□□□ 0.27
CSRP1-201ENST00000340006 USP28Q96RU2 1077 aa16.77■□□□□ 0.27
CSRP1-201ENST00000340006 NAP1L4Q99733 375 aaKnown RBP16.77■□□□□ 0.27
CSRP1-201ENST00000340006 PDCD2LQ9BRP1 358 aa16.77■□□□□ 0.27
CSRP1-201ENST00000340006 FTOQ9C0B1 505 aaKnown RBP eCLIP16.77■□□□□ 0.27
CSRP1-201ENST00000340006 PLXNA1Q9UIW2 1896 aa16.76■□□□□ 0.27
CSRP1-201ENST00000340006 FKTNO75072 461 aa16.76■□□□□ 0.27
CSRP1-201ENST00000340006 ALDH5A1P51649 535 aaPredicted RBP16.76■□□□□ 0.27
CSRP1-201ENST00000340006 PDE4DQ08499 809 aa16.76■□□□□ 0.27
CSRP1-201ENST00000340006 MAP2K5Q13163 448 aa16.76■□□□□ 0.27
CSRP1-201ENST00000340006 STXBP2Q15833 593 aa16.76■□□□□ 0.27
CSRP1-201ENST00000340006 TRIM47Q96LD4 638 aa16.76■□□□□ 0.27
CSRP1-201ENST00000340006 WBP1LQ9NX94 342 aa16.76■□□□□ 0.27
CSRP1-201ENST00000340006 CEP131Q9UPN4 1083 aa16.76■□□□□ 0.27
CSRP1-201ENST00000340006 CNPY2Q9Y2B0 182 aa16.76■□□□□ 0.27
CSRP1-201ENST00000340006 CYP3A4P08684 503 aa16.75■□□□□ 0.27
CSRP1-201ENST00000340006 CYP2B6P20813 491 aa16.75■□□□□ 0.27
CSRP1-201ENST00000340006 CTGFP29279 349 aa16.75■□□□□ 0.27
CSRP1-201ENST00000340006 STK38Q15208 465 aa16.75■□□□□ 0.27
CSRP1-201ENST00000340006 ZNF792Q3KQV3 632 aa16.75■□□□□ 0.27
CSRP1-201ENST00000340006 PRR16Q569H4 304 aa16.75■□□□□ 0.27
CSRP1-201ENST00000340006 MORN1Q5T089 497 aa16.75■□□□□ 0.27
CSRP1-201ENST00000340006 PCNX4Q63HM2 1172 aa16.75■□□□□ 0.27
CSRP1-201ENST00000340006 VSIG10LQ86VR7 867 aa16.75■□□□□ 0.27
CSRP1-201ENST00000340006 CD99L2Q8TCZ2 262 aa16.75■□□□□ 0.27
CSRP1-201ENST00000340006 DDX25Q9UHL0 483 aaKnown RBP16.75■□□□□ 0.27
CSRP1-201ENST00000340006 DDX49Q9Y6V7 483 aaKnown RBP16.75■□□□□ 0.27
CSRP1-201ENST00000340006 THSD7BQ9C0I4 1608 aa16.75■□□□□ 0.27
CSRP1-201ENST00000340006 RPTORQ8N122 1335 aa16.75■□□□□ 0.27
CSRP1-201ENST00000340006 WNT7AO00755 349 aa16.75■□□□□ 0.27
CSRP1-201ENST00000340006 TDP2O95551 362 aa16.75■□□□□ 0.27
CSRP1-201ENST00000340006 HOXD10P28358 340 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms