RNA–Protein interactions for RNA: ENST00000339485.3

VMAC-201, Transcript of vimentin type intermediate filament associated coiled-coil protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMAC, Length 2,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMAC-201ENST00000339485 ZBED3Q96IU2 234 aaPredicted RBP20.85■□□□□ 0.93
VMAC-201ENST00000339485 MTMR4Q9NYA4 1195 aa20.85■□□□□ 0.93
VMAC-201ENST00000339485 CNTNAP1P78357 1384 aa20.85■□□□□ 0.93
VMAC-201ENST00000339485 FAM205CA6NFA0 338 aa20.85■□□□□ 0.93
VMAC-201ENST00000339485 EGFRP00533 1210 aa20.85■□□□□ 0.93
VMAC-201ENST00000339485 KIF5BP33176 963 aa20.85■□□□□ 0.93
VMAC-201ENST00000339485 RBM26Q5T8P6 1007 aaKnown RBP20.85■□□□□ 0.93
VMAC-201ENST00000339485 FAM71BQ8TC56 605 aa20.85■□□□□ 0.93
VMAC-201ENST00000339485 SYMPKQ92797 1274 aaKnown RBP20.85■□□□□ 0.93
VMAC-201ENST00000339485 ZBTB9Q96C00 473 aa20.85■□□□□ 0.93
VMAC-201ENST00000339485 IGKV6D-41A0A0C4DH26 115 aa20.84■□□□□ 0.93
VMAC-201ENST00000339485 TRIM75PA6NK02 468 aa20.84■□□□□ 0.93
VMAC-201ENST00000339485 NOVP48745 357 aa20.84■□□□□ 0.93
VMAC-201ENST00000339485 AKAP17AQ02040 695 aaKnown RBP20.84■□□□□ 0.93
VMAC-201ENST00000339485 GRM4Q14833 912 aa20.84■□□□□ 0.93
VMAC-201ENST00000339485 STAG2Q8N3U4 1231 aa20.84■□□□□ 0.93
VMAC-201ENST00000339485 RNF225M0QZC1 329 aaPredicted RBP20.84■□□□□ 0.93
VMAC-201ENST00000339485 CCT6AP40227 531 aaKnown RBP20.84■□□□□ 0.93
VMAC-201ENST00000339485 ZNF280AP59817 542 aaPredicted RBP20.84■□□□□ 0.93
VMAC-201ENST00000339485 SHROOM1Q2M3G4 852 aaPredicted RBP20.84■□□□□ 0.93
VMAC-201ENST00000339485 WDR93Q6P2C0 686 aa20.84■□□□□ 0.93
VMAC-201ENST00000339485 MICALL2Q8IY33 904 aa20.84■□□□□ 0.93
VMAC-201ENST00000339485 FAM151AQ8WW52 585 aa20.84■□□□□ 0.93
VMAC-201ENST00000339485 LIMA1Q9UHB6 759 aaKnown RBP20.84■□□□□ 0.93
VMAC-201ENST00000339485 RSPH14Q9UHP6 348 aa20.84■□□□□ 0.93
VMAC-201ENST00000339485 V9GY48 417 aaPredicted RBP20.84■□□□□ 0.93
VMAC-201ENST00000339485 LRRC10BA6NIK2 292 aa20.83■□□□□ 0.93
VMAC-201ENST00000339485 LRRIQ3A6PVS8 624 aaPredicted RBP20.83■□□□□ 0.93
VMAC-201ENST00000339485 KRT31Q15323 416 aa20.83■□□□□ 0.93
VMAC-201ENST00000339485 CERKLQ49MI3 558 aaPredicted RBP20.83■□□□□ 0.93
VMAC-201ENST00000339485 EARS2Q5JPH6 523 aaKnown RBP20.83■□□□□ 0.93
VMAC-201ENST00000339485 LRRC47Q8N1G4 583 aaKnown RBP20.83■□□□□ 0.93
VMAC-201ENST00000339485 MAD2L2Q9UI95 211 aa20.83■□□□□ 0.93
VMAC-201ENST00000339485 PRPF3O43395 683 aaKnown RBP20.83■□□□□ 0.92
VMAC-201ENST00000339485 LMNB1P20700 586 aa20.83■□□□□ 0.92
VMAC-201ENST00000339485 PKN1Q16512 942 aa20.83■□□□□ 0.92
VMAC-201ENST00000339485 CYP26C1Q6V0L0 522 aa20.83■□□□□ 0.92
VMAC-201ENST00000339485 CCDC17Q96LX7 622 aa20.83■□□□□ 0.92
VMAC-201ENST00000339485 MYO6Q9UM54 1294 aa20.83■□□□□ 0.92
VMAC-201ENST00000339485 CTNND2Q9UQB3 1225 aa20.83■□□□□ 0.92
VMAC-201ENST00000339485 CDC25AP30304 524 aa20.82■□□□□ 0.92
VMAC-201ENST00000339485 HSP90B2PQ58FF3 399 aa20.82■□□□□ 0.92
VMAC-201ENST00000339485 TATDN1Q6P1N9 297 aa20.82■□□□□ 0.92
VMAC-201ENST00000339485 CDAN1Q8IWY9 1227 aa20.82■□□□□ 0.92
VMAC-201ENST00000339485 CCDC102AQ96A19 550 aa20.82■□□□□ 0.92
VMAC-201ENST00000339485 TMEM39BQ9GZU3 492 aa20.82■□□□□ 0.92
VMAC-201ENST00000339485 MED4Q9NPJ6 270 aa20.82■□□□□ 0.92
VMAC-201ENST00000339485 TTLL1O95922 423 aa20.81■□□□□ 0.92
VMAC-201ENST00000339485 GOLGA8HP0CJ92 632 aa20.81■□□□□ 0.92
VMAC-201ENST00000339485 FKBP1CQ5VVH2 108 aa20.81■□□□□ 0.92
VMAC-201ENST00000339485 NCAPH2Q6IBW4 605 aa20.81■□□□□ 0.92
VMAC-201ENST00000339485 FOXR1Q6PIV2 292 aa20.81■□□□□ 0.92
VMAC-201ENST00000339485 SAMD7Q7Z3H4 446 aa20.81■□□□□ 0.92
VMAC-201ENST00000339485 FERMT2Q96AC1 680 aa20.81■□□□□ 0.92
VMAC-201ENST00000339485 CNOT7Q9UIV1 285 aaKnown RBP20.81■□□□□ 0.92
VMAC-201ENST00000339485 SCAF8Q9UPN6 1271 aaKnown RBP20.81■□□□□ 0.92
VMAC-201ENST00000339485 N4BP3O15049 544 aa20.81■□□□□ 0.92
VMAC-201ENST00000339485 GDF11O95390 407 aa20.81■□□□□ 0.92
VMAC-201ENST00000339485 WNT7AO00755 349 aa20.8■□□□□ 0.92
VMAC-201ENST00000339485 COBLO75128 1261 aa20.8■□□□□ 0.92
VMAC-201ENST00000339485 ATP2B2Q01814 1243 aa20.8■□□□□ 0.92
VMAC-201ENST00000339485 TBC1D10BQ4KMP7 808 aaPredicted RBP20.8■□□□□ 0.92
VMAC-201ENST00000339485 IPO4Q8TEX9 1081 aaKnown RBP20.8■□□□□ 0.92
VMAC-201ENST00000339485 SLF1Q9BQI6 1058 aa20.8■□□□□ 0.92
VMAC-201ENST00000339485 VPS54Q9P1Q0 977 aa20.8■□□□□ 0.92
VMAC-201ENST00000339485 PHACTR2O75167 634 aa20.8■□□□□ 0.92
VMAC-201ENST00000339485 TRIM14Q14142 442 aa20.8■□□□□ 0.92
VMAC-201ENST00000339485 USP17L2Q6R6M4 530 aa20.8■□□□□ 0.92
VMAC-201ENST00000339485 NUP88Q99567 741 aaPredicted RBP20.8■□□□□ 0.92
VMAC-201ENST00000339485 PHF20Q9BVI0 1012 aa20.8■□□□□ 0.92
VMAC-201ENST00000339485 PALM3A6NDB9 673 aaPredicted RBP20.79■□□□□ 0.92
VMAC-201ENST00000339485 MMP14P50281 582 aa20.79■□□□□ 0.92
VMAC-201ENST00000339485 COPB1P53618 953 aaKnown RBP20.79■□□□□ 0.92
VMAC-201ENST00000339485 FAM83AQ86UY5 434 aa20.79■□□□□ 0.92
VMAC-201ENST00000339485 ZFP91Q96JP5 570 aaPredicted RBP20.79■□□□□ 0.92
VMAC-201ENST00000339485 VPS16Q9H269 839 aa20.79■□□□□ 0.92
VMAC-201ENST00000339485 ACBD3Q9H3P7 528 aa20.79■□□□□ 0.92
VMAC-201ENST00000339485 VIPAS39Q9H9C1 493 aa20.79■□□□□ 0.92
VMAC-201ENST00000339485 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.79■□□□□ 0.92
VMAC-201ENST00000339485 REXO2Q9Y3B8 237 aaKnown RBP20.79■□□□□ 0.92
VMAC-201ENST00000339485 PARP1P09874 1014 aaKnown RBP20.79■□□□□ 0.92
VMAC-201ENST00000339485 YBX3P16989 372 aaKnown RBP eCLIP20.79■□□□□ 0.92
VMAC-201ENST00000339485 KRT2P35908 639 aa20.79■□□□□ 0.92
VMAC-201ENST00000339485 GNAQP50148 359 aa20.79■□□□□ 0.92
VMAC-201ENST00000339485 TRAPPC11Q7Z392 1133 aa20.79■□□□□ 0.92
VMAC-201ENST00000339485 STAMQ92783 540 aa20.79■□□□□ 0.92
VMAC-201ENST00000339485 FAM204AQ9H8W3 233 aa20.79■□□□□ 0.92
VMAC-201ENST00000339485 HERC5Q9UII4 1024 aaKnown RBP20.79■□□□□ 0.92
VMAC-201ENST00000339485 RWDD2AQ9UIY3 292 aa20.79■□□□□ 0.92
VMAC-201ENST00000339485 USP17L5A8MUK1 530 aa20.78■□□□□ 0.92
VMAC-201ENST00000339485 BMP15O95972 392 aa20.78■□□□□ 0.92
VMAC-201ENST00000339485 PDHBP11177 359 aa20.78■□□□□ 0.92
VMAC-201ENST00000339485 KRT9P35527 623 aa20.78■□□□□ 0.92
VMAC-201ENST00000339485 TNNT3P45378 269 aaPredicted RBP20.78■□□□□ 0.92
VMAC-201ENST00000339485 AARSP49588 968 aaKnown RBP eCLIP20.78■□□□□ 0.92
VMAC-201ENST00000339485 SPAG1Q07617 926 aa20.78■□□□□ 0.92
VMAC-201ENST00000339485 RRP1BQ14684 758 aaKnown RBP20.78■□□□□ 0.92
VMAC-201ENST00000339485 ABCB5Q2M3G0 1257 aa20.78■□□□□ 0.92
VMAC-201ENST00000339485 SLC35G1Q2M3R5 365 aa20.78■□□□□ 0.92
VMAC-201ENST00000339485 CPVLQ9H3G5 476 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms