RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.81□□□□□ -0.36
SHANK2-201ENST00000338508 PRXQ9BXM0 1461 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 BCAMP50895 628 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 ADAM9Q13443 819 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 KCTD6Q8NC69 237 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 FBXL13Q8NEE6 735 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 ABTB1Q969K4 478 aaPredicted RBP12.8□□□□□ -0.36
SHANK2-201ENST00000338508 TTC1Q99614 292 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 XPO4Q9C0E2 1151 aaKnown RBP12.8□□□□□ -0.36
SHANK2-201ENST00000338508 E7EWF7 191 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 PTPN21Q16825 1174 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 DCAF15Q66K64 600 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 CALN1Q9BXU9 219 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 FTOQ9C0B1 505 aaKnown RBP eCLIP12.8□□□□□ -0.36
SHANK2-201ENST00000338508 COG4Q9H9E3 785 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 CD58P19256 250 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 TRIP13Q15645 432 aaPredicted RBP12.8□□□□□ -0.36
SHANK2-201ENST00000338508 FAM186BQ8IYM0 893 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 FAM8A1Q9UBU6 413 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 FAN1Q9Y2M0 1017 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 KDM2BQ8NHM5 1336 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 ICA1Q05084 483 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 TMED2Q15363 201 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 SPOPLQ6IQ16 392 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 DNAJC10Q8IXB1 793 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 ATP8A2Q9NTI2 1148 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 GRIN2AQ12879 1464 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 CAPRIN1Q14444 709 aaKnown RBP12.8□□□□□ -0.36
SHANK2-201ENST00000338508 SLFN12Q8IYM2 578 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 BLIDQ8IZY5 108 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 HOMER3Q9NSC5 361 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 SLC8A2Q9UPR5 921 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 F5H423 210 aaPredicted RBP12.8□□□□□ -0.36
SHANK2-201ENST00000338508 CLIC2O15247 247 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 VAMP4O75379 141 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 VCPP55072 806 aaKnown RBP12.8□□□□□ -0.36
SHANK2-201ENST00000338508 EHHADHQ08426 723 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 DARS2Q6PI48 645 aaKnown RBP12.8□□□□□ -0.36
SHANK2-201ENST00000338508 KIAA1024Q9UPX6 916 aa12.8□□□□□ -0.36
SHANK2-201ENST00000338508 SRGAP2CP0DJJ0 459 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 BASP1P80723 227 aaKnown RBP12.79□□□□□ -0.36
SHANK2-201ENST00000338508 KCTD2Q14681 263 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 NKX1-1Q15270 411 aaPredicted RBP12.79□□□□□ -0.36
SHANK2-201ENST00000338508 TMTC3Q6ZXV5 915 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 NEUROG2Q9H2A3 272 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 TEKT2Q9UIF3 430 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 RAD50Q92878 1312 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 ODR4Q5SWX8 454 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 TRIM67Q6ZTA4 783 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 SNX19Q92543 992 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 ZSCAN10Q96SZ4 725 aaPredicted RBP12.79□□□□□ -0.36
SHANK2-201ENST00000338508 LLPHQ9BRT6 129 aaKnown RBP12.79□□□□□ -0.36
SHANK2-201ENST00000338508 MROH5Q6ZUA9 1318 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 KLRF2D3W0D1 207 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 M0R2C6 588 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 MEIS1O00470 390 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 MCF2L2Q86YR7 1114 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 SMC5Q8IY18 1101 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 RNF139Q8WU17 664 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 DEPDC1BQ8WUY9 529 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 HSPH1Q92598 858 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 OTULINQ96BN8 352 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 CLIC6Q96NY7 704 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 YTHDC2Q9H6S0 1430 aaKnown RBP12.79□□□□□ -0.36
SHANK2-201ENST00000338508 ANXA13P27216 316 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 ART3Q13508 389 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 TUBB2AQ13885 445 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 KIF19Q2TAC6 998 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 TUBB2BQ9BVA1 445 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 PFDN1O60925 122 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 ZMYND10O75800 440 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 HLA-DPA1P20036 260 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 BTDP43251 543 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 PTK2Q05397 1052 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 FAM180AQ6UWF9 173 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 ZNF577Q9BSK1 485 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 LIG3P49916 1009 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 GUCY2DQ02846 1103 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 ABCB5Q2M3G0 1257 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 LRCH2Q5VUJ6 765 aa12.79□□□□□ -0.36
SHANK2-201ENST00000338508 OSBPP22059 807 aa12.78□□□□□ -0.36
SHANK2-201ENST00000338508 INTS4Q96HW7 963 aaKnown RBP12.78□□□□□ -0.36
SHANK2-201ENST00000338508 LZICQ8WZA0 190 aa12.78□□□□□ -0.36
SHANK2-201ENST00000338508 LRRC4Q9HBW1 653 aa12.78□□□□□ -0.36
SHANK2-201ENST00000338508 NEMP1O14524 444 aa12.78□□□□□ -0.36
SHANK2-201ENST00000338508 MAPK4P31152 587 aa12.78□□□□□ -0.36
SHANK2-201ENST00000338508 TRIM58Q8NG06 486 aa12.78□□□□□ -0.36
SHANK2-201ENST00000338508 MAGOHBQ96A72 148 aaKnown RBP12.78□□□□□ -0.36
SHANK2-201ENST00000338508 ABCC1P33527 1531 aa12.78□□□□□ -0.36
SHANK2-201ENST00000338508 FLT4P35916 1363 aa12.78□□□□□ -0.36
SHANK2-201ENST00000338508 GTPBP10A4D1E9 387 aaKnown RBP12.78□□□□□ -0.36
SHANK2-201ENST00000338508 SETSIPP0DME0 302 aa12.78□□□□□ -0.36
SHANK2-201ENST00000338508 TFDP1Q14186 410 aa12.78□□□□□ -0.36
SHANK2-201ENST00000338508 CCDC85BQ15834 202 aaPredicted RBP12.78□□□□□ -0.36
SHANK2-201ENST00000338508 ARHGEF18Q6ZSZ5 1173 aa12.78□□□□□ -0.36
SHANK2-201ENST00000338508 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.78□□□□□ -0.36
SHANK2-201ENST00000338508 RNF168Q8IYW5 571 aaPredicted RBP12.78□□□□□ -0.36
SHANK2-201ENST00000338508 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.78□□□□□ -0.363e-6■■■■■ 34.3
SHANK2-201ENST00000338508 C19orf44Q9H6X5 657 aa12.78□□□□□ -0.36
SHANK2-201ENST00000338508 CXCR5P32302 372 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms