RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 ZNF662Q6ZS27 426 aa22.16■■□□□ 1.14
CDCA4-201ENST00000336219 SND1Q7KZF4 910 aaKnown RBP eCLIP22.16■■□□□ 1.14
CDCA4-201ENST00000336219 MAPKAPK5Q8IW41 473 aa22.16■■□□□ 1.14
CDCA4-201ENST00000336219 C7orf25Q9BPX7 421 aa22.16■■□□□ 1.14
CDCA4-201ENST00000336219 EFCC1Q9HA90 598 aa22.16■■□□□ 1.14
CDCA4-201ENST00000336219 ZNHIT6Q9NWK9 470 aaKnown RBP22.16■■□□□ 1.14
CDCA4-201ENST00000336219 SAP30BPQ9UHR5 308 aaKnown RBP22.16■■□□□ 1.14
CDCA4-201ENST00000336219 LEMD3Q9Y2U8 911 aa22.16■■□□□ 1.14
CDCA4-201ENST00000336219 SNED1Q8TER0 1413 aa22.16■■□□□ 1.14
CDCA4-201ENST00000336219 BICDL2A1A5D9 508 aa22.15■■□□□ 1.14
CDCA4-201ENST00000336219 GOLGA6BA6NDN3 693 aa22.15■■□□□ 1.14
CDCA4-201ENST00000336219 CCDC96Q2M329 555 aa22.15■■□□□ 1.14
CDCA4-201ENST00000336219 CREG2Q8IUH2 290 aa22.15■■□□□ 1.14
CDCA4-201ENST00000336219 RETREG2Q8NC44 543 aa22.15■■□□□ 1.14
CDCA4-201ENST00000336219 SECISBP2LQ93073 1101 aaKnown RBP22.15■■□□□ 1.14
CDCA4-201ENST00000336219 CCDC47Q96A33 483 aaKnown RBP22.15■■□□□ 1.14
CDCA4-201ENST00000336219 NUP58Q9BVL2 599 aa22.15■■□□□ 1.14
CDCA4-201ENST00000336219 GOLGA6CA6NDK9 693 aa22.15■■□□□ 1.14
CDCA4-201ENST00000336219 IPO7O95373 1038 aaKnown RBP22.15■■□□□ 1.14
CDCA4-201ENST00000336219 GOLGA6DP0CG33 693 aa22.15■■□□□ 1.14
CDCA4-201ENST00000336219 MTIF2P46199 727 aaKnown RBP22.15■■□□□ 1.14
CDCA4-201ENST00000336219 STK4Q13043 487 aa22.15■■□□□ 1.14
CDCA4-201ENST00000336219 DDX60LQ5H9U9 1706 aaKnown RBP22.15■■□□□ 1.14
CDCA4-201ENST00000336219 EHBP1Q8NDI1 1231 aa22.15■■□□□ 1.14
CDCA4-201ENST00000336219 FAM76AQ8TAV0 307 aa22.15■■□□□ 1.14
CDCA4-201ENST00000336219 PURBQ96QR8 312 aaKnown RBP22.15■■□□□ 1.14
CDCA4-201ENST00000336219 GOLGA6AQ9NYA3 693 aa22.15■■□□□ 1.14
CDCA4-201ENST00000336219 MOCS3O95396 460 aa22.14■■□□□ 1.14
CDCA4-201ENST00000336219 FAM98CQ17RN3 349 aaKnown RBP22.14■■□□□ 1.14
CDCA4-201ENST00000336219 MIIPQ5JXC2 388 aa22.14■■□□□ 1.14
CDCA4-201ENST00000336219 AENQ8WTP8 325 aaKnown RBP22.14■■□□□ 1.14
CDCA4-201ENST00000336219 RPGRIP1Q96KN7 1286 aa22.14■■□□□ 1.14
CDCA4-201ENST00000336219 RTFDC1Q9BY42 306 aaPredicted RBP22.14■■□□□ 1.14
CDCA4-201ENST00000336219 SMCO2A6NFE2 343 aa22.14■■□□□ 1.13
CDCA4-201ENST00000336219 EPHB6O15197 1021 aa22.14■■□□□ 1.13
CDCA4-201ENST00000336219 LDHCP07864 332 aa22.14■■□□□ 1.13
CDCA4-201ENST00000336219 ERCC3P19447 782 aa22.14■■□□□ 1.13
CDCA4-201ENST00000336219 CCT5P48643 541 aa22.14■■□□□ 1.13
CDCA4-201ENST00000336219 ASIC1P78348 528 aa22.14■■□□□ 1.13
CDCA4-201ENST00000336219 ZBED6P86452 979 aa22.14■■□□□ 1.13
CDCA4-201ENST00000336219 KIF5AQ12840 1032 aa22.14■■□□□ 1.13
CDCA4-201ENST00000336219 FAM114A1Q8IWE2 563 aa22.14■■□□□ 1.13
CDCA4-201ENST00000336219 NOC4LQ9BVI4 516 aaKnown RBP22.14■■□□□ 1.13
CDCA4-201ENST00000336219 ZNF287Q9HBT7 754 aa22.14■■□□□ 1.13
CDCA4-201ENST00000336219 C6orf50Q9HD87 102 aa22.14■■□□□ 1.13
CDCA4-201ENST00000336219 GNA11P29992 359 aa22.13■■□□□ 1.13
CDCA4-201ENST00000336219 VAV2P52735 878 aa22.13■■□□□ 1.13
CDCA4-201ENST00000336219 DNAJC21Q5F1R6 531 aaKnown RBP22.13■■□□□ 1.13
CDCA4-201ENST00000336219 NEK8Q86SG6 692 aa22.13■■□□□ 1.13
CDCA4-201ENST00000336219 EYA3Q99504 573 aa22.13■■□□□ 1.13
CDCA4-201ENST00000336219 PPP1R2P41236 205 aa22.13■■□□□ 1.13
CDCA4-201ENST00000336219 NFIXQ14938 502 aa22.13■■□□□ 1.13
CDCA4-201ENST00000336219 NFRKBQ6P4R8 1299 aa22.13■■□□□ 1.13
CDCA4-201ENST00000336219 SNX12Q9UMY4 172 aa22.13■■□□□ 1.13
CDCA4-201ENST00000336219 TECP42680 631 aa22.12■■□□□ 1.13
CDCA4-201ENST00000336219 CDK8P49336 464 aa22.12■■□□□ 1.13
CDCA4-201ENST00000336219 IRAK1P51617 712 aa22.12■■□□□ 1.13
CDCA4-201ENST00000336219 GRAPQ13588 217 aa22.12■■□□□ 1.13
CDCA4-201ENST00000336219 C16orf86Q6ZW13 317 aa22.12■■□□□ 1.13
CDCA4-201ENST00000336219 AMIGO3Q86WK7 504 aa22.12■■□□□ 1.13
CDCA4-201ENST00000336219 CCDC170Q8IYT3 715 aa22.12■■□□□ 1.13
CDCA4-201ENST00000336219 GRAPLQ8TC17 118 aaPredicted RBP22.12■■□□□ 1.13
CDCA4-201ENST00000336219 MMTAG2Q9BU76 263 aaKnown RBP22.12■■□□□ 1.13
CDCA4-201ENST00000336219 ANO9A1A5B4 782 aa22.12■■□□□ 1.13
CDCA4-201ENST00000336219 NCK2O43639 380 aa22.12■■□□□ 1.13
CDCA4-201ENST00000336219 USP17L2Q6R6M4 530 aa22.12■■□□□ 1.13
CDCA4-201ENST00000336219 ZNF804AQ7Z570 1209 aa22.12■■□□□ 1.13
CDCA4-201ENST00000336219 ZSCAN29Q8IWY8 852 aaPredicted RBP22.12■■□□□ 1.13
CDCA4-201ENST00000336219 NEDD1Q8NHV4 660 aa22.12■■□□□ 1.13
CDCA4-201ENST00000336219 CCDC42Q96M95 316 aa22.12■■□□□ 1.13
CDCA4-201ENST00000336219 FAM184BQ9ULE4 1060 aa22.12■■□□□ 1.13
CDCA4-201ENST00000336219 BTAF1O14981 1849 aa22.11■■□□□ 1.13
CDCA4-201ENST00000336219 SHOX2O60902 331 aaPredicted RBP22.11■■□□□ 1.13
CDCA4-201ENST00000336219 C2CD5Q86YS7 1000 aa22.11■■□□□ 1.13
CDCA4-201ENST00000336219 TSEN2Q8NCE0 465 aaKnown RBP22.11■■□□□ 1.13
CDCA4-201ENST00000336219 ARHGAP20Q9P2F6 1191 aa22.11■■□□□ 1.13
CDCA4-201ENST00000336219 RTCBQ9Y3I0 505 aaKnown RBP22.11■■□□□ 1.13
CDCA4-201ENST00000336219 BTDP43251 543 aa22.11■■□□□ 1.13
CDCA4-201ENST00000336219 AMPD3Q01432 767 aa22.11■■□□□ 1.13
CDCA4-201ENST00000336219 COBLL1Q53SF7 1204 aa22.11■■□□□ 1.13
CDCA4-201ENST00000336219 ANKRD13CQ8N6S4 541 aa22.11■■□□□ 1.13
CDCA4-201ENST00000336219 KIAA0895Q8NCT3 520 aa22.11■■□□□ 1.13
CDCA4-201ENST00000336219 TBCKQ8TEA7 893 aa22.11■■□□□ 1.13
CDCA4-201ENST00000336219 PPM1EQ8WY54 764 aa22.11■■□□□ 1.13
CDCA4-201ENST00000336219 ARHGEF1Q92888 912 aaKnown RBP22.11■■□□□ 1.13
CDCA4-201ENST00000336219 GPR101Q96P66 508 aaPredicted RBP22.11■■□□□ 1.13
CDCA4-201ENST00000336219 POLD4Q9HCU8 107 aa22.11■■□□□ 1.13
CDCA4-201ENST00000336219 FAM207AQ9NSI2 230 aaPredicted RBP22.11■■□□□ 1.13
CDCA4-201ENST00000336219 ATP2B2Q01814 1243 aa22.1■■□□□ 1.13
CDCA4-201ENST00000336219 FIGNQ5HY92 759 aa22.1■■□□□ 1.13
CDCA4-201ENST00000336219 CNNM4Q6P4Q7 775 aa22.1■■□□□ 1.13
CDCA4-201ENST00000336219 SPATA4Q8NEY3 305 aa22.1■■□□□ 1.13
CDCA4-201ENST00000336219 ERGIC2Q96RQ1 377 aa22.1■■□□□ 1.13
CDCA4-201ENST00000336219 SEC63Q9UGP8 760 aaKnown RBP22.1■■□□□ 1.13
CDCA4-201ENST00000336219 SPA17Q15506 151 aa22.1■■□□□ 1.13
CDCA4-201ENST00000336219 SOGA3Q5TF21 947 aa22.1■■□□□ 1.13
CDCA4-201ENST00000336219 MICALL1Q8N3F8 863 aa22.1■■□□□ 1.13
CDCA4-201ENST00000336219 IFIH1Q9BYX4 1025 aaKnown RBP22.1■■□□□ 1.13
CDCA4-201ENST00000336219 PCDHA13Q9Y5I0 950 aa22.1■■□□□ 1.13
CDCA4-201ENST00000336219 A0A1W2PQJ5 194 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms