RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 MAP2K1Q02750 393 aaPredicted RBP18.33■□□□□ 0.53
CDC42EP4-201ENST00000335793 ARID5AQ03989 594 aa18.33■□□□□ 0.53
CDC42EP4-201ENST00000335793 KCNB1Q14721 858 aa18.33■□□□□ 0.53
CDC42EP4-201ENST00000335793 GRM4Q14833 912 aa18.33■□□□□ 0.53
CDC42EP4-201ENST00000335793 LRRC41Q15345 812 aa18.33■□□□□ 0.53
CDC42EP4-201ENST00000335793 SBK1Q52WX2 424 aa18.33■□□□□ 0.53
CDC42EP4-201ENST00000335793 CNNM4Q6P4Q7 775 aa18.33■□□□□ 0.53
CDC42EP4-201ENST00000335793 SH3GLB2Q9NR46 395 aa18.33■□□□□ 0.53
CDC42EP4-201ENST00000335793 FRMPD2Q68DX3 1309 aaPredicted RBP18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 XIRP1Q702N8 1843 aaKnown RBP18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 RCCD1A6NED2 376 aa18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 SRGNP10124 158 aa18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 FAM98CQ17RN3 349 aaKnown RBP18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 TRAPPC11Q7Z392 1133 aa18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 KRT25Q7Z3Z0 450 aa18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 SLC51AQ86UW1 340 aa18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 FAM71BQ8TC56 605 aa18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 NOC3LQ8WTT2 800 aaKnown RBP18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 PIGSQ96S52 555 aa18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 CDCA7Q9BWT1 371 aaPredicted RBP18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 CCSER1Q9C0I3 900 aa18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 KBTBD4Q9NVX7 518 aa18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 PDS5AQ29RF7 1337 aaKnown RBP18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 SLIT2O94813 1529 aa18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 STXBP3O00186 592 aa18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 KLRC4O43908 158 aa18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 TNNI2P48788 182 aa18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 IQCEQ6IPM2 695 aa18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 TEX11Q8IYF3 940 aa18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 WDR66Q8TBY9 1149 aa18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 DNAJC7Q99615 494 aa18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 NLRC4Q9NPP4 1024 aa18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 TMEM260Q9NX78 707 aa18.33■□□□□ 0.52
CDC42EP4-201ENST00000335793 TULP1O00294 542 aaPredicted RBP18.32■□□□□ 0.52
CDC42EP4-201ENST00000335793 LDHCP07864 332 aa18.32■□□□□ 0.52
CDC42EP4-201ENST00000335793 AMPD2Q01433 879 aa18.32■□□□□ 0.52
CDC42EP4-201ENST00000335793 PICALMQ13492 652 aa18.32■□□□□ 0.52
CDC42EP4-201ENST00000335793 LRRC31Q6UY01 552 aa18.32■□□□□ 0.52
CDC42EP4-201ENST00000335793 REXO1Q8N1G1 1221 aaKnown RBP18.32■□□□□ 0.52
CDC42EP4-201ENST00000335793 DUSP9Q99956 384 aaKnown RBP18.32■□□□□ 0.52
CDC42EP4-201ENST00000335793 PSMD14O00487 310 aa18.32■□□□□ 0.52
CDC42EP4-201ENST00000335793 PAX7P23759 505 aa18.32■□□□□ 0.52
CDC42EP4-201ENST00000335793 TMEM266Q2M3C6 531 aa18.32■□□□□ 0.52
CDC42EP4-201ENST00000335793 GBP6Q6ZN66 633 aa18.32■□□□□ 0.52
CDC42EP4-201ENST00000335793 NGLY1Q96IV0 654 aa18.32■□□□□ 0.52
CDC42EP4-201ENST00000335793 RUFY1Q96T51 708 aa18.32■□□□□ 0.52
CDC42EP4-201ENST00000335793 TBC1D7Q9P0N9 293 aa18.32■□□□□ 0.52
CDC42EP4-201ENST00000335793 KIF1CO43896 1103 aaKnown RBP18.31■□□□□ 0.52
CDC42EP4-201ENST00000335793 MOCS3O95396 460 aa18.31■□□□□ 0.52
CDC42EP4-201ENST00000335793 HNRNPH1P31943 449 aaKnown RBP18.31■□□□□ 0.52
CDC42EP4-201ENST00000335793 FAM182BQ5T319 152 aa18.31■□□□□ 0.52
CDC42EP4-201ENST00000335793 POTEDQ86YR6 584 aa18.31■□□□□ 0.52
CDC42EP4-201ENST00000335793 ZNF507Q8TCN5 953 aa18.31■□□□□ 0.52
CDC42EP4-201ENST00000335793 AFAP1L1Q8TED9 768 aa18.31■□□□□ 0.52
CDC42EP4-201ENST00000335793 COA7Q96BR5 231 aa18.31■□□□□ 0.52
CDC42EP4-201ENST00000335793 MLXIPQ9HAP2 919 aa18.31■□□□□ 0.52
CDC42EP4-201ENST00000335793 SLC7A5Q01650 507 aa18.31■□□□□ 0.52
CDC42EP4-201ENST00000335793 GPCPD1Q9NPB8 672 aa18.31■□□□□ 0.52
CDC42EP4-201ENST00000335793 MAGEA1P43355 309 aa18.31■□□□□ 0.52
CDC42EP4-201ENST00000335793 GSTO1P78417 241 aa18.31■□□□□ 0.52
CDC42EP4-201ENST00000335793 GRIK5Q16478 980 aa18.31■□□□□ 0.52
CDC42EP4-201ENST00000335793 CALCRLQ16602 461 aa18.31■□□□□ 0.52
CDC42EP4-201ENST00000335793 SND1Q7KZF4 910 aaKnown RBP eCLIP18.31■□□□□ 0.52
CDC42EP4-201ENST00000335793 ECM29Q5VYK3 1845 aa18.3■□□□□ 0.52
CDC42EP4-201ENST00000335793 PAPPAQ13219 1627 aa18.3■□□□□ 0.52
CDC42EP4-201ENST00000335793 F8W031 263 aaPredicted RBP18.3■□□□□ 0.52
CDC42EP4-201ENST00000335793 H0YHG0 523 aa18.3■□□□□ 0.52
CDC42EP4-201ENST00000335793 BUB1O43683 1085 aa18.3■□□□□ 0.52
CDC42EP4-201ENST00000335793 PAFAH1B1P43034 410 aa18.3■□□□□ 0.52
CDC42EP4-201ENST00000335793 RNASE9P60153 205 aaKnown RBP18.3■□□□□ 0.52
CDC42EP4-201ENST00000335793 CCDC40Q4G0X9 1142 aa18.3■□□□□ 0.52
CDC42EP4-201ENST00000335793 MYL1P05976 194 aa18.3■□□□□ 0.52
CDC42EP4-201ENST00000335793 FECHP22830 423 aa18.3■□□□□ 0.52
CDC42EP4-201ENST00000335793 EIF4A3P38919 411 aaKnown RBP18.3■□□□□ 0.52
CDC42EP4-201ENST00000335793 BTDP43251 543 aa18.3■□□□□ 0.52
CDC42EP4-201ENST00000335793 GALNT17Q6IS24 598 aa18.3■□□□□ 0.52
CDC42EP4-201ENST00000335793 SNX29Q8TEQ0 813 aa18.3■□□□□ 0.52
CDC42EP4-201ENST00000335793 ALS2CR12Q96Q35 445 aa18.3■□□□□ 0.52
CDC42EP4-201ENST00000335793 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.3■□□□□ 0.52
CDC42EP4-201ENST00000335793 CENPHQ9H3R5 247 aa18.3■□□□□ 0.52
CDC42EP4-201ENST00000335793 SMARCAL1Q9NZC9 954 aa18.3■□□□□ 0.52
CDC42EP4-201ENST00000335793 POTEMA6NI47 508 aa18.29■□□□□ 0.52
CDC42EP4-201ENST00000335793 LAD1O00515 517 aa18.29■□□□□ 0.52
CDC42EP4-201ENST00000335793 NKRFO15226 690 aaKnown RBP eCLIP18.29■□□□□ 0.526e-9■■□□□ 13.9
CDC42EP4-201ENST00000335793 CCDC170Q8IYT3 715 aa18.29■□□□□ 0.52
CDC42EP4-201ENST00000335793 AK8Q96MA6 479 aa18.29■□□□□ 0.52
CDC42EP4-201ENST00000335793 EPS15P42566 896 aa18.29■□□□□ 0.52
CDC42EP4-201ENST00000335793 CDK8P49336 464 aa18.29■□□□□ 0.52
CDC42EP4-201ENST00000335793 KRT79Q5XKE5 535 aa18.29■□□□□ 0.52
CDC42EP4-201ENST00000335793 LRRC15Q8TF66 581 aa18.29■□□□□ 0.52
CDC42EP4-201ENST00000335793 NDST4Q9H3R1 872 aa18.29■□□□□ 0.52
CDC42EP4-201ENST00000335793 TRAF5O00463 557 aa18.29■□□□□ 0.52
CDC42EP4-201ENST00000335793 VAV2P52735 878 aa18.29■□□□□ 0.52
CDC42EP4-201ENST00000335793 SUGP1Q8IWZ8 645 aaKnown RBP18.29■□□□□ 0.52
CDC42EP4-201ENST00000335793 LRRC47Q8N1G4 583 aaKnown RBP18.29■□□□□ 0.52
CDC42EP4-201ENST00000335793 RETREG2Q8NC44 543 aa18.29■□□□□ 0.52
CDC42EP4-201ENST00000335793 EP400Q96L91 3159 aa18.28■□□□□ 0.52
CDC42EP4-201ENST00000335793 SKAP2O75563 359 aaPredicted RBP18.28■□□□□ 0.52
CDC42EP4-201ENST00000335793 GGCXP38435 758 aa18.28■□□□□ 0.52
CDC42EP4-201ENST00000335793 NFIXQ14938 502 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 930.1 ms