RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 ATL3Q6DD88 541 aa24.53■■□□□ 1.52
TPM1-204ENST00000334895 NEK8Q86SG6 692 aa24.53■■□□□ 1.52
TPM1-204ENST00000334895 ANKRD35Q8N283 1001 aa24.53■■□□□ 1.52
TPM1-204ENST00000334895 TAAR1Q96RJ0 339 aa24.53■■□□□ 1.52
TPM1-204ENST00000334895 NCLP19338 710 aaKnown RBP24.52■■□□□ 1.52
TPM1-204ENST00000334895 TTC38Q5R3I4 469 aa24.52■■□□□ 1.52
TPM1-204ENST00000334895 ANO1Q5XXA6 986 aa24.52■■□□□ 1.52
TPM1-204ENST00000334895 GDPD2Q9HCC8 539 aa24.52■■□□□ 1.52
TPM1-204ENST00000334895 POLR3EQ9NVU0 708 aa24.52■■□□□ 1.52
TPM1-204ENST00000334895 RTEL1Q9NZ71 1219 aa24.52■■□□□ 1.52
TPM1-204ENST00000334895 PFASO15067 1338 aa24.52■■□□□ 1.52
TPM1-204ENST00000334895 FRMPD4Q14CM0 1322 aa24.52■■□□□ 1.52
TPM1-204ENST00000334895 NASPP49321 788 aaPredicted RBP24.51■■□□□ 1.51
TPM1-204ENST00000334895 WDR78Q5VTH9 848 aa24.51■■□□□ 1.51
TPM1-204ENST00000334895 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.51■■□□□ 1.51
TPM1-204ENST00000334895 ZNFX1Q9P2E3 1918 aaKnown RBP24.51■■□□□ 1.51
TPM1-204ENST00000334895 FIBPO43427 364 aa24.5■■□□□ 1.51
TPM1-204ENST00000334895 UBXN2AP68543 259 aa24.5■■□□□ 1.51
TPM1-204ENST00000334895 ARHGAP4P98171 946 aa24.5■■□□□ 1.51
TPM1-204ENST00000334895 PTPAQ15257 358 aa24.5■■□□□ 1.51
TPM1-204ENST00000334895 SF3A1Q15459 793 aaKnown RBP24.5■■□□□ 1.51
TPM1-204ENST00000334895 LETM2Q2VYF4 491 aa24.5■■□□□ 1.51
TPM1-204ENST00000334895 MMP19Q99542 508 aa24.5■■□□□ 1.51
TPM1-204ENST00000334895 ASTN1O14525 1302 aa24.5■■□□□ 1.51
TPM1-204ENST00000334895 CNTN2Q02246 1040 aa24.5■■□□□ 1.51
TPM1-204ENST00000334895 ZNF174Q15697 407 aa24.5■■□□□ 1.51
TPM1-204ENST00000334895 IL31RAQ8NI17 732 aa24.5■■□□□ 1.51
TPM1-204ENST00000334895 GBP4Q96PP9 640 aa24.5■■□□□ 1.51
TPM1-204ENST00000334895 CFAP45Q9UL16 551 aa24.5■■□□□ 1.51
TPM1-204ENST00000334895 DNAJC25-GNG10A0A024R161 153 aa24.49■■□□□ 1.51
TPM1-204ENST00000334895 TDP2O95551 362 aa24.49■■□□□ 1.51
TPM1-204ENST00000334895 HSPA8P11142 646 aaKnown RBP24.49■■□□□ 1.51
TPM1-204ENST00000334895 GPR142Q7Z601 462 aa24.49■■□□□ 1.51
TPM1-204ENST00000334895 FAM133AQ8N9E0 248 aa24.49■■□□□ 1.51
TPM1-204ENST00000334895 LEO1Q8WVC0 666 aaPredicted RBP24.49■■□□□ 1.51
TPM1-204ENST00000334895 RMDN3Q96TC7 470 aa24.49■■□□□ 1.51
TPM1-204ENST00000334895 CFHR5Q9BXR6 569 aa24.49■■□□□ 1.51
TPM1-204ENST00000334895 PXMP2Q9NR77 195 aa24.49■■□□□ 1.51
TPM1-204ENST00000334895 ZSWIM8A7E2V4 1837 aa24.48■■□□□ 1.51
TPM1-204ENST00000334895 PGK2P07205 417 aa24.48■■□□□ 1.51
TPM1-204ENST00000334895 CYP3A4P08684 503 aa24.48■■□□□ 1.51
TPM1-204ENST00000334895 FCER1AP12319 257 aa24.48■■□□□ 1.51
TPM1-204ENST00000334895 MAPK4P31152 587 aa24.48■■□□□ 1.51
TPM1-204ENST00000334895 MCM7P33993 719 aa24.48■■□□□ 1.51
TPM1-204ENST00000334895 USP11P51784 963 aa24.48■■□□□ 1.51
TPM1-204ENST00000334895 KCTD2Q14681 263 aa24.48■■□□□ 1.51
TPM1-204ENST00000334895 LINC00301Q8NCQ3 95 aa24.48■■□□□ 1.51
TPM1-204ENST00000334895 FGD4Q96M96 766 aa24.48■■□□□ 1.51
TPM1-204ENST00000334895 RCOR1Q9UKL0 485 aa24.48■■□□□ 1.51
TPM1-204ENST00000334895 CCNT1O60563 726 aaKnown RBP24.47■■□□□ 1.51
TPM1-204ENST00000334895 EIF2AK2P19525 551 aaKnown RBP24.47■■□□□ 1.51
TPM1-204ENST00000334895 PDCD2LQ9BRP1 358 aa24.47■■□□□ 1.51
TPM1-204ENST00000334895 MRVI1Q9Y6F6 885 aa24.47■■□□□ 1.51
TPM1-204ENST00000334895 MGAMO43451 1857 aa24.47■■□□□ 1.51
TPM1-204ENST00000334895 SOWAHBA6NEL2 793 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 POTEB2H3BUK9 544 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 YEATS4O95619 227 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 CTCFP49711 727 aaPredicted RBP24.46■■□□□ 1.51
TPM1-204ENST00000334895 LBX1P52954 281 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 SLC39A14Q15043 492 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 PGM5Q15124 567 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 CCAR1Q8IX12 1150 aaKnown RBP24.46■■□□□ 1.51
TPM1-204ENST00000334895 C4orf32Q8N8J7 132 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 MBOAT7Q96N66 472 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 SCAND2PQ9GZW5 306 aaPredicted RBP24.46■■□□□ 1.51
TPM1-204ENST00000334895 EHMT1Q9H9B1 1298 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 ZNF236Q9UL36 1845 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 DOCK3Q8IZD9 2030 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 CYP3A7-CYP3A51PA0A087WV96 503 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 SLC37A4O43826 429 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 PTPREP23469 700 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 CYP3A7P24462 503 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 CTGFP29279 349 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 CIITAP33076 1130 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 ARHGEF16Q5VV41 709 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 PPP4R3AQ6IN85 833 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 PLEKHH3Q7Z736 793 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 ABRAQ8N0Z2 381 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 SPATA32Q96LK8 384 aa24.46■■□□□ 1.51
TPM1-204ENST00000334895 DDX49Q9Y6V7 483 aaKnown RBP24.46■■□□□ 1.51
TPM1-204ENST00000334895 FAM86B1E9PN63 330 aa24.45■■□□□ 1.5
TPM1-204ENST00000334895 ECM2O94769 699 aaPredicted RBP24.45■■□□□ 1.5
TPM1-204ENST00000334895 FAM86B2P0C5J1 330 aa24.45■■□□□ 1.5
TPM1-204ENST00000334895 ADORA2AP29274 412 aa24.45■■□□□ 1.5
TPM1-204ENST00000334895 GRB14Q14449 540 aa24.45■■□□□ 1.5
TPM1-204ENST00000334895 STK38Q15208 465 aa24.45■■□□□ 1.5
TPM1-204ENST00000334895 MOXD1Q6UVY6 613 aa24.45■■□□□ 1.5
TPM1-204ENST00000334895 TMEM87AQ8NBN3 555 aa24.45■■□□□ 1.5
TPM1-204ENST00000334895 NSUN6Q8TEA1 469 aaKnown RBP24.45■■□□□ 1.5
TPM1-204ENST00000334895 ZFP91Q96JP5 570 aaPredicted RBP24.45■■□□□ 1.5
TPM1-204ENST00000334895 TMEM60Q9H2L4 133 aa24.45■■□□□ 1.5
TPM1-204ENST00000334895 PLXNA1Q9UIW2 1896 aa24.45■■□□□ 1.5
TPM1-204ENST00000334895 LRRC37A2A6NM11 1700 aa24.44■■□□□ 1.5
TPM1-204ENST00000334895 STRNO43815 780 aa24.44■■□□□ 1.5
TPM1-204ENST00000334895 MRPS9P82933 396 aaKnown RBP24.44■■□□□ 1.5
TPM1-204ENST00000334895 PCNX4Q63HM2 1172 aa24.44■■□□□ 1.5
TPM1-204ENST00000334895 DNERQ8NFT8 737 aa24.44■■□□□ 1.5
TPM1-204ENST00000334895 CYP2W1Q8TAV3 490 aa24.44■■□□□ 1.5
TPM1-204ENST00000334895 LENG9Q96B70 501 aa24.44■■□□□ 1.5
TPM1-204ENST00000334895 IVNS1ABPQ9Y6Y0 642 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms