RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 PNMA6FA0A0J9YX94 578 aa7.45□□□□□ -1.22
USP16-201ENST00000334352 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.45□□□□□ -1.22
USP16-201ENST00000334352 OPLAHO14841 1288 aa7.45□□□□□ -1.22
USP16-201ENST00000334352 RANBP6O60518 1105 aaKnown RBP7.45□□□□□ -1.22
USP16-201ENST00000334352 FGBP02675 491 aa7.45□□□□□ -1.22
USP16-201ENST00000334352 SYN1P17600 705 aa7.45□□□□□ -1.22
USP16-201ENST00000334352 CHMLP26374 656 aa7.45□□□□□ -1.22
USP16-201ENST00000334352 TRAF7Q6Q0C0 670 aa7.45□□□□□ -1.22
USP16-201ENST00000334352 VSIG10LQ86VR7 867 aa7.45□□□□□ -1.22
USP16-201ENST00000334352 FBXO11Q86XK2 927 aa7.45□□□□□ -1.22
USP16-201ENST00000334352 MB21D2Q8IYB1 491 aaPredicted RBP7.45□□□□□ -1.22
USP16-201ENST00000334352 RSPH1Q8WYR4 309 aa7.45□□□□□ -1.22
USP16-201ENST00000334352 RNPC3Q96LT9 517 aaKnown RBP7.45□□□□□ -1.22
USP16-201ENST00000334352 WNT8AQ9H1J5 351 aa7.45□□□□□ -1.22
USP16-201ENST00000334352 ZHX1Q9UKY1 873 aaPredicted RBP7.45□□□□□ -1.22
USP16-201ENST00000334352 MMP3P08254 477 aa7.45□□□□□ -1.22
USP16-201ENST00000334352 ALAS1P13196 640 aa7.45□□□□□ -1.22
USP16-201ENST00000334352 RPS6P62753 249 aaKnown RBP7.45□□□□□ -1.22
USP16-201ENST00000334352 PDE4DQ08499 809 aa7.45□□□□□ -1.22
USP16-201ENST00000334352 CDC37Q16543 378 aaPredicted RBP7.45□□□□□ -1.22
USP16-201ENST00000334352 GNASQ5JWF2 1037 aa7.45□□□□□ -1.22
USP16-201ENST00000334352 C9orf50Q5SZB4 431 aa7.45□□□□□ -1.22
USP16-201ENST00000334352 KCTD1Q719H9 257 aa7.45□□□□□ -1.22
USP16-201ENST00000334352 SGMS1Q86VZ5 419 aa7.45□□□□□ -1.22
USP16-201ENST00000334352 CXXC1Q9P0U4 656 aaPredicted RBP7.45□□□□□ -1.22
USP16-201ENST00000334352 ZSWIM5Q9P217 1185 aa7.45□□□□□ -1.22
USP16-201ENST00000334352 PDE4DIPQ5VU43 2346 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 ABHD14A-ACY1A0A1B0GW23 586 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 SPATA31C2B4DYI2 1134 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 B4GALT4O60513 344 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 PPFIA4O75335 1185 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 PRDM1O75626 825 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 MYCP01106 439 aaPredicted RBP7.44□□□□□ -1.22
USP16-201ENST00000334352 PDE4AP27815 886 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 ADAM17P78536 824 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 MDM2Q00987 491 aaPredicted RBP7.44□□□□□ -1.22
USP16-201ENST00000334352 TROAPQ12815 778 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 CNKSR3Q6P9H4 555 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 SLC30A10Q6XR72 485 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 OR6J1Q8NGC5 347 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 IGDCC4Q8TDY8 1250 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 APBB2Q92870 758 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 CTAGE1Q96RT6 745 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.44□□□□□ -1.223e-9■■■■□ 22
USP16-201ENST00000334352 DIAPH3Q9NSV4 1193 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 GTF2IRD1Q9UHL9 959 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 MSRAQ9UJ68 235 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 NFASCO94856 1347 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 NFIBO00712 420 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 CELF3Q5SZQ8 465 aaKnown RBP7.44□□□□□ -1.22
USP16-201ENST00000334352 TSHZ3Q63HK5 1081 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 PCNX4Q63HM2 1172 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 TTBK2Q6IQ55 1244 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 KAT2BQ92831 832 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 TIFAQ96CG3 184 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 INPP4AQ96PE3 977 aaPredicted RBP7.44□□□□□ -1.22
USP16-201ENST00000334352 STX8Q9UNK0 236 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 MICAL3Q7RTP6 2002 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 NMT2O60551 498 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 C6orf222P0C671 652 aaPredicted RBP7.44□□□□□ -1.22
USP16-201ENST00000334352 IQCF3P0C7M6 154 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 GSPT1P15170 499 aaKnown RBP7.44□□□□□ -1.22
USP16-201ENST00000334352 CCND2P30279 289 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 HTRA4P83105 476 aaPredicted RBP7.44□□□□□ -1.22
USP16-201ENST00000334352 DGKDQ16760 1214 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 QRICH1Q2TAL8 776 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 PUS10Q3MIT2 529 aaKnown RBP7.44□□□□□ -1.22
USP16-201ENST00000334352 GPRASP2Q96D09 838 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 HIPK3Q9H422 1215 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 COG5Q9UP83 839 aa7.44□□□□□ -1.22
USP16-201ENST00000334352 CPXCR1Q8N123 301 aa7.43□□□□□ -1.22
USP16-201ENST00000334352 NCOA7Q8NI08 942 aa7.43□□□□□ -1.22
USP16-201ENST00000334352 CDHR1Q96JP9 859 aa7.43□□□□□ -1.22
USP16-201ENST00000334352 LMAN2LQ9H0V9 348 aa7.43□□□□□ -1.22
USP16-201ENST00000334352 LGR5O75473 907 aa7.43□□□□□ -1.22
USP16-201ENST00000334352 SELPP16109 830 aa7.43□□□□□ -1.22
USP16-201ENST00000334352 CASTP20810 708 aaKnown RBP7.43□□□□□ -1.22
USP16-201ENST00000334352 IL27Q8NEV9 243 aa7.43□□□□□ -1.22
USP16-201ENST00000334352 PDCD2LQ9BRP1 358 aa7.43□□□□□ -1.22
USP16-201ENST00000334352 RNF216Q9NWF9 866 aaPredicted RBP7.43□□□□□ -1.22
USP16-201ENST00000334352 NLRC5Q86WI3 1866 aa7.42□□□□□ -1.22
USP16-201ENST00000334352 KIF5BP33176 963 aa7.42□□□□□ -1.22
USP16-201ENST00000334352 EVCP57679 992 aa7.42□□□□□ -1.22
USP16-201ENST00000334352 SART3Q15020 963 aaKnown RBP7.42□□□□□ -1.22
USP16-201ENST00000334352 PGM5Q15124 567 aa7.42□□□□□ -1.22
USP16-201ENST00000334352 NAALADL2Q58DX5 795 aa7.42□□□□□ -1.22
USP16-201ENST00000334352 KIAA1211Q6ZU35 1233 aa7.42□□□□□ -1.22
USP16-201ENST00000334352 MAFAQ8NHW3 353 aaPredicted RBP7.42□□□□□ -1.22
USP16-201ENST00000334352 LSG1Q9H089 658 aaKnown RBP7.42□□□□□ -1.22
USP16-201ENST00000334352 ZNF576Q9H609 170 aa7.42□□□□□ -1.22
USP16-201ENST00000334352 RBM28Q9NW13 759 aaKnown RBP7.42□□□□□ -1.22
USP16-201ENST00000334352 COL1A2P08123 1366 aa7.42□□□□□ -1.22
USP16-201ENST00000334352 ESYT2A0FGR8 921 aa7.42□□□□□ -1.22
USP16-201ENST00000334352 DYNC1LI2O43237 492 aaPredicted RBP7.42□□□□□ -1.22
USP16-201ENST00000334352 DNAJB2P25686 324 aa7.42□□□□□ -1.22
USP16-201ENST00000334352 PSEN2P49810 448 aa7.42□□□□□ -1.22
USP16-201ENST00000334352 ATN1P54259 1190 aaPredicted RBP7.42□□□□□ -1.22
USP16-201ENST00000334352 NEDD9Q14511 834 aa7.42□□□□□ -1.22
USP16-201ENST00000334352 NECTIN1Q15223 517 aa7.42□□□□□ -1.22
USP16-201ENST00000334352 BMP2KLQ5H9B9 411 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms