RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 C4orf32Q8N8J7 132 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 PDGFDQ9GZP0 370 aaPredicted RBP9.88□□□□□ -0.83
LSAMP-201ENST00000333617 NRBP1Q9UHY1 535 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 DACH1Q9UI36 760 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 ESYT2A0FGR8 921 aa9.87□□□□□ -0.83
LSAMP-201ENST00000333617 DDTLA6NHG4 134 aaPredicted RBP9.87□□□□□ -0.83
LSAMP-201ENST00000333617 LAD1O00515 517 aa9.87□□□□□ -0.83
LSAMP-201ENST00000333617 MYO1BO43795 1136 aa9.87□□□□□ -0.83
LSAMP-201ENST00000333617 BMP6P22004 513 aa9.87□□□□□ -0.83
LSAMP-201ENST00000333617 TXLNAP40222 546 aa9.87□□□□□ -0.83
LSAMP-201ENST00000333617 ZNF543Q08ER8 600 aa9.87□□□□□ -0.83
LSAMP-201ENST00000333617 MORC3Q14149 939 aa9.87□□□□□ -0.83
LSAMP-201ENST00000333617 NONOQ15233 471 aaKnown RBP eCLIP9.87□□□□□ -0.83
LSAMP-201ENST00000333617 IL17AQ16552 155 aa9.87□□□□□ -0.83
LSAMP-201ENST00000333617 CFAP100Q494V2 611 aa9.87□□□□□ -0.83
LSAMP-201ENST00000333617 DTHD1Q6ZMT9 781 aa9.87□□□□□ -0.83
LSAMP-201ENST00000333617 SH3RF1Q7Z6J0 888 aa9.87□□□□□ -0.83
LSAMP-201ENST00000333617 RTKN2Q8IZC4 609 aa9.87□□□□□ -0.83
LSAMP-201ENST00000333617 IQUBQ8NA54 791 aa9.87□□□□□ -0.83
LSAMP-201ENST00000333617 MLKLQ8NB16 471 aa9.87□□□□□ -0.83
LSAMP-201ENST00000333617 SPATA20Q8TB22 786 aa9.87□□□□□ -0.83
LSAMP-201ENST00000333617 TDRD3Q9H7E2 651 aaKnown RBP9.87□□□□□ -0.83
LSAMP-201ENST00000333617 DNAJC18Q9H819 358 aa9.87□□□□□ -0.83
LSAMP-201ENST00000333617 COL2A1P02458 1487 aaPredicted RBP9.87□□□□□ -0.83
LSAMP-201ENST00000333617 TTC24A2A3L6 582 aaPredicted RBP9.86□□□□□ -0.83
LSAMP-201ENST00000333617 YDJCA8MPS7 323 aa9.86□□□□□ -0.83
LSAMP-201ENST00000333617 LMOD1P29536 600 aaPredicted RBP9.86□□□□□ -0.83
LSAMP-201ENST00000333617 AFMP43652 599 aa9.86□□□□□ -0.83
LSAMP-201ENST00000333617 NOLC1Q14978 699 aaKnown RBP eCLIP9.86□□□□□ -0.83
LSAMP-201ENST00000333617 CCDC96Q2M329 555 aa9.86□□□□□ -0.83
LSAMP-201ENST00000333617 CCDC144BQ3MJ40 725 aa9.86□□□□□ -0.83
LSAMP-201ENST00000333617 CERKLQ49MI3 558 aaPredicted RBP9.86□□□□□ -0.83
LSAMP-201ENST00000333617 GPATCH4Q5T3I0 446 aaKnown RBP9.86□□□□□ -0.83
LSAMP-201ENST00000333617 TATDN1Q6P1N9 297 aa9.86□□□□□ -0.83
LSAMP-201ENST00000333617 SH3BP5LQ7L8J4 393 aa9.86□□□□□ -0.83
LSAMP-201ENST00000333617 DEFB132Q7Z7B7 95 aa9.86□□□□□ -0.83
LSAMP-201ENST00000333617 REXO1Q8N1G1 1221 aaKnown RBP9.86□□□□□ -0.83
LSAMP-201ENST00000333617 SLC16A10Q8TF71 515 aa9.86□□□□□ -0.83
LSAMP-201ENST00000333617 PAGE5Q96GU1 130 aa9.86□□□□□ -0.83
LSAMP-201ENST00000333617 NAP1L5Q96NT1 182 aaPredicted RBP9.86□□□□□ -0.83
LSAMP-201ENST00000333617 PSMD1Q99460 953 aa9.86□□□□□ -0.83
LSAMP-201ENST00000333617 NUDT12Q9BQG2 462 aa9.86□□□□□ -0.83
LSAMP-201ENST00000333617 IFNKQ9P0W0 207 aa9.86□□□□□ -0.83
LSAMP-201ENST00000333617 ATRNL1Q5VV63 1379 aa9.86□□□□□ -0.83
LSAMP-201ENST00000333617 PNMA6FA0A0J9YX94 578 aa9.85□□□□□ -0.83
LSAMP-201ENST00000333617 FAM196BA6NMK8 535 aa9.85□□□□□ -0.83
LSAMP-201ENST00000333617 ENTPD3O75355 529 aa9.85□□□□□ -0.83
LSAMP-201ENST00000333617 SLURP2P0DP57 97 aa9.85□□□□□ -0.83
LSAMP-201ENST00000333617 GJA5P36382 358 aa9.85□□□□□ -0.83
LSAMP-201ENST00000333617 PRPHP41219 470 aa9.85□□□□□ -0.83
LSAMP-201ENST00000333617 ADCY7P51828 1080 aa9.85□□□□□ -0.83
LSAMP-201ENST00000333617 FANCCQ00597 558 aa9.85□□□□□ -0.83
LSAMP-201ENST00000333617 DPYDQ12882 1025 aa9.85□□□□□ -0.83
LSAMP-201ENST00000333617 ORC2Q13416 577 aaPredicted RBP9.85□□□□□ -0.83
LSAMP-201ENST00000333617 RSBN1LQ6PCB5 846 aaPredicted RBP9.85□□□□□ -0.83
LSAMP-201ENST00000333617 NEK8Q86SG6 692 aa9.85□□□□□ -0.83
LSAMP-201ENST00000333617 ADGRF4Q8IZF3 695 aa9.85□□□□□ -0.83
LSAMP-201ENST00000333617 LARGE2Q8N3Y3 721 aa9.85□□□□□ -0.83
LSAMP-201ENST00000333617 KIAA1524Q8TCG1 905 aa9.85□□□□□ -0.83
LSAMP-201ENST00000333617 DCAF4Q8WV16 495 aa9.85□□□□□ -0.83
LSAMP-201ENST00000333617 MKL1Q969V6 931 aa9.85□□□□□ -0.83
LSAMP-201ENST00000333617 PRMT6Q96LA8 375 aaPredicted RBP9.85□□□□□ -0.83
LSAMP-201ENST00000333617 GSDMAQ96QA5 445 aa9.85□□□□□ -0.83
LSAMP-201ENST00000333617 XPO4Q9C0E2 1151 aaKnown RBP9.85□□□□□ -0.83
LSAMP-201ENST00000333617 TMEM60Q9H2L4 133 aa9.85□□□□□ -0.83
LSAMP-201ENST00000333617 KANSL2Q9H9L4 492 aa9.85□□□□□ -0.83
LSAMP-201ENST00000333617 PYCARDQ9ULZ3 195 aa9.85□□□□□ -0.83
LSAMP-201ENST00000333617 COL4A5P29400 1685 aa9.85□□□□□ -0.83
LSAMP-201ENST00000333617 SPDYE5A6NIY4 337 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 CBFA2T2O43439 604 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 NEMFO60524 1076 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 CCNT1O60563 726 aaKnown RBP9.84□□□□□ -0.83
LSAMP-201ENST00000333617 EEF2P13639 858 aaKnown RBP9.84□□□□□ -0.83
LSAMP-201ENST00000333617 DPEP1P16444 411 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 WNT7BP56706 349 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 GSDMDP57764 484 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 LRMPQ12912 555 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 LETM2Q2VYF4 491 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 CT47A1Q5JQC4 288 aaPredicted RBP9.84□□□□□ -0.83
LSAMP-201ENST00000333617 JAKMIP3Q5VZ66 844 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 TTBK2Q6IQ55 1244 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 PDXDC2PQ6P474 469 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 TMEM179Q6ZVK1 233 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 C17orf53Q8N3J3 647 aaPredicted RBP9.84□□□□□ -0.83
LSAMP-201ENST00000333617 SNIP1Q8TAD8 396 aaKnown RBP9.84□□□□□ -0.83
LSAMP-201ENST00000333617 COA7Q96BR5 231 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 VPS33BQ9H267 617 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 HSD3B7Q9H2F3 369 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 JMJD4Q9H9V9 463 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 SPTLC3Q9NUV7 552 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 TMOD2Q9NZR1 351 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 NYAP2Q9P242 653 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 IMPACTQ9P2X3 320 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 BIN2Q9UBW5 565 aaPredicted RBP9.84□□□□□ -0.83
LSAMP-201ENST00000333617 HDAC9Q9UKV0 1011 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 RAD17O75943 681 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 SERPINC1P01008 464 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 VIL1P09327 827 aaKnown RBP9.84□□□□□ -0.83
LSAMP-201ENST00000333617 OR52Z1P0C646 297 aa9.84□□□□□ -0.83
LSAMP-201ENST00000333617 KCNA3P22001 575 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms