RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 C1orf167Q5SNV9 1468 aa13.08□□□□□ -0.32
LIMK2-202ENST00000333611 TSPY2A6NKD2 308 aa13.08□□□□□ -0.32
LIMK2-202ENST00000333611 RPN1P04843 607 aaKnown RBP13.08□□□□□ -0.32
LIMK2-202ENST00000333611 PARP1P09874 1014 aaKnown RBP13.08□□□□□ -0.32
LIMK2-202ENST00000333611 UBA7P41226 1012 aa13.08□□□□□ -0.32
LIMK2-202ENST00000333611 C11orf91Q3C1V1 193 aa13.08□□□□□ -0.32
LIMK2-202ENST00000333611 TCP11X2Q5H9J9 407 aa13.08□□□□□ -0.32
LIMK2-202ENST00000333611 SHISA4Q96DD7 197 aa13.08□□□□□ -0.32
LIMK2-202ENST00000333611 ZSCAN10Q96SZ4 725 aaPredicted RBP13.08□□□□□ -0.32
LIMK2-202ENST00000333611 A1CFQ9NQ94 594 aaKnown RBP13.08□□□□□ -0.32
LIMK2-202ENST00000333611 CD2APQ9Y5K6 639 aa13.08□□□□□ -0.32
LIMK2-202ENST00000333611 PAFAH1B1P43034 410 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 AARSP49588 968 aaKnown RBP eCLIP13.07□□□□□ -0.32
LIMK2-202ENST00000333611 GUCY2DQ02846 1103 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 APTXQ7Z2E3 356 aaKnown RBP13.07□□□□□ -0.32
LIMK2-202ENST00000333611 KIF2BQ8N4N8 673 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 FBXO3Q9UK99 471 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 DNM1LO00429 736 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 ADAMTS3O15072 1205 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 FAM47EQ6ZV65 393 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 TRIM58Q8NG06 486 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 OR8K1Q8NGG5 319 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 PRCCQ92733 491 aaPredicted RBP13.07□□□□□ -0.32
LIMK2-202ENST00000333611 BORCS6Q96GS4 357 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 MYO1AQ9UBC5 1043 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 A0A1B0GVG6 124 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 VIMP08670 466 aaKnown RBP13.07□□□□□ -0.32
LIMK2-202ENST00000333611 SESN3P58005 492 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 TUBB4BP68371 445 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 DBN1Q16643 649 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 PTGISQ16647 500 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 NT5DC1Q5TFE4 455 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 ARMCX6Q7L4S7 300 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 KRT26Q7Z3Y9 468 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 LONP2Q86WA8 852 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 MYLK4Q86YV6 388 aaPredicted RBP13.07□□□□□ -0.32
LIMK2-202ENST00000333611 ZNF579Q8NAF0 562 aaKnown RBP13.07□□□□□ -0.32
LIMK2-202ENST00000333611 RNF26Q9BY78 433 aaPredicted RBP13.07□□□□□ -0.32
LIMK2-202ENST00000333611 AGPAT5Q9NUQ2 364 aa13.07□□□□□ -0.32
LIMK2-202ENST00000333611 TMEM94Q12767 1356 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 ARFGEF2Q9Y6D5 1785 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 CCDC194A0A1B0GVG4 234 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 CLSTN1O94985 981 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 SCTRP47872 440 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 IFNAR2P48551 515 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 PAPOLAP51003 745 aaKnown RBP13.06□□□□□ -0.32
LIMK2-202ENST00000333611 IFFO1Q0D2I5 559 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 CDKAL1Q5VV42 579 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 UBLCP1Q8WVY7 318 aaPredicted RBP13.06□□□□□ -0.32
LIMK2-202ENST00000333611 TATDN2Q93075 761 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 HPS3Q969F9 1004 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 CCDC47Q96A33 483 aaKnown RBP13.06□□□□□ -0.32
LIMK2-202ENST00000333611 FERMT2Q96AC1 680 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 ACSBG1Q96GR2 724 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 CPVLQ9H3G5 476 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 VAT1LQ9HCJ6 419 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 ZSCAN5CA6NGD5 496 aaPredicted RBP13.06□□□□□ -0.32
LIMK2-202ENST00000333611 PMS1P54277 932 aaKnown RBP13.06□□□□□ -0.32
LIMK2-202ENST00000333611 SPAG1Q07617 926 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 HEATR3Q7Z4Q2 680 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 FAM228AQ86W67 206 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 KLHL7Q8IXQ5 586 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 CSGALNACT2Q8N6G5 542 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 TANGO6Q9C0B7 1094 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 CHCHD3Q9NX63 227 aaKnown RBP13.06□□□□□ -0.32
LIMK2-202ENST00000333611 ABCC12Q96J65 1359 aa13.06□□□□□ -0.32
LIMK2-202ENST00000333611 LRRD1A4D1F6 860 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 CYP2D6P10635 497 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 PKN1Q16512 942 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 GKAP1Q5VSY0 366 aaPredicted RBP13.05□□□□□ -0.32
LIMK2-202ENST00000333611 WDR93Q6P2C0 686 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 SPATS2Q86XZ4 545 aaKnown RBP13.05□□□□□ -0.32
LIMK2-202ENST00000333611 EZH1Q92800 747 aaPredicted RBP13.05□□□□□ -0.32
LIMK2-202ENST00000333611 CUL5Q93034 780 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 FAM207AQ9NSI2 230 aaPredicted RBP13.05□□□□□ -0.32
LIMK2-202ENST00000333611 RTL9Q8NET4 1388 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 WDR17Q8IZU2 1322 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 NWD2Q9ULI1 1742 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 GOLGA6L10A0A0M3HER8 536 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 RTN2O75298 545 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 ATP6V1G2O95670 118 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 TPP2P29144 1249 aaPredicted RBP13.05□□□□□ -0.32
LIMK2-202ENST00000333611 RAB27AP51159 221 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 PDCD2Q16342 344 aaPredicted RBP13.05□□□□□ -0.32
LIMK2-202ENST00000333611 SUSD4Q5VX71 490 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 VGLL2Q8N8G2 317 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 EPB41L5Q9HCM4 733 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 RHBDL2Q9NX52 303 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 RPS6KL1Q9Y6S9 549 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 H0Y3Z8 333 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 SHOX2O60902 331 aaPredicted RBP13.05□□□□□ -0.32
LIMK2-202ENST00000333611 RASSF9O75901 435 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 PYGBP11216 843 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 GNAT2P19087 354 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 ASIC1P78348 528 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 INF2Q27J81 1249 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 TYW1BQ6NUM6 668 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 KLHL23Q8NBE8 558 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 NUP58Q9BVL2 599 aa13.05□□□□□ -0.32
LIMK2-202ENST00000333611 LACRTQ9GZZ8 138 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms