RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 RDH13Q8NBN7 331 aa11.9□□□□□ -0.5
CUL4A-201ENST00000326335 DDX12PQ92771 950 aa11.9□□□□□ -0.5
CUL4A-201ENST00000326335 CCDC94Q9BW85 323 aaPredicted RBP11.9□□□□□ -0.5
CUL4A-201ENST00000326335 GLIS2Q9BZE0 524 aaPredicted RBP11.9□□□□□ -0.5
CUL4A-201ENST00000326335 TRIM9Q9C026 710 aa11.9□□□□□ -0.5
CUL4A-201ENST00000326335 LUC7L2Q9Y383 392 aaKnown RBP11.9□□□□□ -0.5
CUL4A-201ENST00000326335 DNAH12Q6ZR08 3092 aa11.9□□□□□ -0.5
CUL4A-201ENST00000326335 A0A1B0GTH6 734 aa11.9□□□□□ -0.5
CUL4A-201ENST00000326335 KIF5CO60282 957 aa11.9□□□□□ -0.5
CUL4A-201ENST00000326335 GYS2P54840 703 aa11.9□□□□□ -0.5
CUL4A-201ENST00000326335 ERVK-24P63145 666 aa11.9□□□□□ -0.5
CUL4A-201ENST00000326335 CCDC40Q4G0X9 1142 aa11.9□□□□□ -0.5
CUL4A-201ENST00000326335 CUL5Q93034 780 aa11.9□□□□□ -0.5
CUL4A-201ENST00000326335 CRAMP1Q96RY5 1269 aa11.9□□□□□ -0.5
CUL4A-201ENST00000326335 GJA3Q9Y6H8 435 aa11.9□□□□□ -0.5
CUL4A-201ENST00000326335 PHACTR2O75167 634 aa11.9□□□□□ -0.5
CUL4A-201ENST00000326335 CXCR5P32302 372 aa11.9□□□□□ -0.5
CUL4A-201ENST00000326335 RCAN1P53805 252 aa11.9□□□□□ -0.5
CUL4A-201ENST00000326335 TERF1P54274 439 aa11.9□□□□□ -0.5
CUL4A-201ENST00000326335 SH3BP5LQ7L8J4 393 aa11.9□□□□□ -0.5
CUL4A-201ENST00000326335 TMC4Q7Z404 712 aa11.9□□□□□ -0.5
CUL4A-201ENST00000326335 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.9□□□□□ -0.51e-9■■■■□ 23.4
CUL4A-201ENST00000326335 RGL1Q9NZL6 768 aa11.9□□□□□ -0.5
CUL4A-201ENST00000326335 FAM237AA0A1B0GTK4 181 aa11.89□□□□□ -0.51
CUL4A-201ENST00000326335 MFAP3LO75121 409 aa11.89□□□□□ -0.51
CUL4A-201ENST00000326335 PPP2R3AQ06190 1150 aa11.89□□□□□ -0.51
CUL4A-201ENST00000326335 TMEM139Q8IV31 216 aa11.89□□□□□ -0.51
CUL4A-201ENST00000326335 TRIML1Q8N9V2 468 aa11.89□□□□□ -0.51
CUL4A-201ENST00000326335 LARP4BQ92615 738 aaKnown RBP11.89□□□□□ -0.51
CUL4A-201ENST00000326335 MTA3Q9BTC8 594 aa11.89□□□□□ -0.51
CUL4A-201ENST00000326335 RMND1Q9NWS8 449 aa11.89□□□□□ -0.51
CUL4A-201ENST00000326335 FAM198AQ9UFP1 575 aa11.89□□□□□ -0.51
CUL4A-201ENST00000326335 MYH15Q9Y2K3 1946 aa11.89□□□□□ -0.51
CUL4A-201ENST00000326335 SNED1Q8TER0 1413 aa11.89□□□□□ -0.51
CUL4A-201ENST00000326335 TRAPPC10P48553 1259 aa11.89□□□□□ -0.51
CUL4A-201ENST00000326335 RRP1BQ14684 758 aaKnown RBP11.89□□□□□ -0.51
CUL4A-201ENST00000326335 SLC27A3Q5K4L6 730 aa11.89□□□□□ -0.51
CUL4A-201ENST00000326335 TRIM65Q6PJ69 517 aa11.89□□□□□ -0.51
CUL4A-201ENST00000326335 ZNF771Q7L3S4 317 aaPredicted RBP11.89□□□□□ -0.51
CUL4A-201ENST00000326335 SH3RF1Q7Z6J0 888 aa11.89□□□□□ -0.51
CUL4A-201ENST00000326335 SPDYE3A6NKU9 549 aa11.89□□□□□ -0.51
CUL4A-201ENST00000326335 EPS15P42566 896 aa11.89□□□□□ -0.51
CUL4A-201ENST00000326335 MRPL12P52815 198 aaKnown RBP11.89□□□□□ -0.51
CUL4A-201ENST00000326335 PSMC6P62333 389 aa11.89□□□□□ -0.51
CUL4A-201ENST00000326335 DCAF17Q5H9S7 520 aaPredicted RBP11.89□□□□□ -0.51
CUL4A-201ENST00000326335 FAM83BQ5T0W9 1011 aa11.89□□□□□ -0.51
CUL4A-201ENST00000326335 MMTAG2Q9BU76 263 aaKnown RBP11.89□□□□□ -0.51
CUL4A-201ENST00000326335 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.89□□□□□ -0.516e-7■□□□□ 9.3
CUL4A-201ENST00000326335 SUGCTQ9HAC7 445 aa11.89□□□□□ -0.51
CUL4A-201ENST00000326335 ZCCHC17Q9NP64 241 aaKnown RBP11.89□□□□□ -0.51
CUL4A-201ENST00000326335 CLIC2O15247 247 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 FAM193AP78312 1265 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 TMED8Q6PL24 325 aaPredicted RBP11.88□□□□□ -0.51
CUL4A-201ENST00000326335 GPBP1Q86WP2 473 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 IRF2BP1Q8IU81 584 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 OGFOD1Q8N543 542 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 SPZ1Q9BXG8 430 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 SMARCAL1Q9NZC9 954 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 NDUFB10O96000 172 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 GRB10Q13322 594 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 CTTNQ14247 550 aaKnown RBP11.88□□□□□ -0.51
CUL4A-201ENST00000326335 CCDC122Q5T0U0 273 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 CACNA2D4Q7Z3S7 1137 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 TPH2Q8IWU9 490 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 ADSSL1Q8N142 457 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 CAGE1Q8TC20 777 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 TRERF1Q96PN7 1200 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 SAMM50Q9Y512 469 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 LRP5O75197 1615 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 A0A1W2PRG0 241 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 IPO7O95373 1038 aaKnown RBP11.88□□□□□ -0.51
CUL4A-201ENST00000326335 RXRBP28702 533 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 NT5DC1Q5TFE4 455 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 RRAGAQ7L523 313 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 KIAA0895Q8NCT3 520 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 JADE2Q9NQC1 790 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 ABHD10Q9NUJ1 306 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 TMOD2Q9NZR1 351 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 RWDD2AQ9UIY3 292 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 ADGRG1Q9Y653 693 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 NRAPQ86VF7 1730 aa11.88□□□□□ -0.51
CUL4A-201ENST00000326335 PNMA6FA0A0J9YX94 578 aa11.87□□□□□ -0.51
CUL4A-201ENST00000326335 ZBTB5O15062 677 aa11.87□□□□□ -0.51
CUL4A-201ENST00000326335 EPHB6O15197 1021 aa11.87□□□□□ -0.51
CUL4A-201ENST00000326335 STX10O60499 249 aa11.87□□□□□ -0.51
CUL4A-201ENST00000326335 ARL6IP4Q66PJ3 421 aaKnown RBP11.87□□□□□ -0.51
CUL4A-201ENST00000326335 APTXQ7Z2E3 356 aaKnown RBP11.87□□□□□ -0.51
CUL4A-201ENST00000326335 UBE2Q2Q8WVN8 375 aa11.87□□□□□ -0.51
CUL4A-201ENST00000326335 P2RX5Q93086 422 aa11.87□□□□□ -0.51
CUL4A-201ENST00000326335 ELMO3Q96BJ8 720 aa11.87□□□□□ -0.51
CUL4A-201ENST00000326335 ERO1AQ96HE7 468 aa11.87□□□□□ -0.51
CUL4A-201ENST00000326335 CTAGE1Q96RT6 745 aa11.87□□□□□ -0.51
CUL4A-201ENST00000326335 PI4KBQ9UBF8 816 aa11.87□□□□□ -0.51
CUL4A-201ENST00000326335 PSDA5PKW4 1024 aaPredicted RBP11.87□□□□□ -0.51
CUL4A-201ENST00000326335 RSPH10B2B2RC85 870 aa11.87□□□□□ -0.51
CUL4A-201ENST00000326335 BUB1O43683 1085 aa11.87□□□□□ -0.51
CUL4A-201ENST00000326335 RSPH10BP0C881 870 aa11.87□□□□□ -0.51
CUL4A-201ENST00000326335 SMCHD1A6NHR9 2005 aa11.87□□□□□ -0.51
CUL4A-201ENST00000326335 KLRC4O43908 158 aa11.87□□□□□ -0.51
CUL4A-201ENST00000326335 PNMA6AP0CW24 399 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms