RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 FOXP2O15409 715 aa23.15■■□□□ 1.3
SSNA1-201ENST00000322310 GPR37L1O60883 481 aa23.15■■□□□ 1.3
SSNA1-201ENST00000322310 BAIAP3O94812 1187 aa23.15■■□□□ 1.3
SSNA1-201ENST00000322310 KCNJ6P48051 423 aa23.15■■□□□ 1.3
SSNA1-201ENST00000322310 PDE4DQ08499 809 aa23.15■■□□□ 1.3
SSNA1-201ENST00000322310 LOC102724159A0A0B4J2E5 919 aa23.14■■□□□ 1.29
SSNA1-201ENST00000322310 WDR5P61964 334 aaKnown RBP23.14■■□□□ 1.29
SSNA1-201ENST00000322310 PWP2Q15269 919 aaKnown RBP23.14■■□□□ 1.29
SSNA1-201ENST00000322310 LRRFIP1Q32MZ4 808 aaKnown RBP23.14■■□□□ 1.29
SSNA1-201ENST00000322310 SYDE2Q5VT97 1194 aa23.14■■□□□ 1.29
SSNA1-201ENST00000322310 DCAF4Q8WV16 495 aa23.14■■□□□ 1.29
SSNA1-201ENST00000322310 CLEC4DQ8WXI8 215 aa23.14■■□□□ 1.29
SSNA1-201ENST00000322310 MTUS1Q9ULD2 1270 aa23.14■■□□□ 1.29
SSNA1-201ENST00000322310 FRMPD2Q68DX3 1309 aaPredicted RBP23.13■■□□□ 1.29
SSNA1-201ENST00000322310 NKRFO15226 690 aaKnown RBP eCLIP23.13■■□□□ 1.29
SSNA1-201ENST00000322310 RANBP6O60518 1105 aaKnown RBP23.13■■□□□ 1.29
SSNA1-201ENST00000322310 KPNA6O60684 536 aa23.13■■□□□ 1.29
SSNA1-201ENST00000322310 DEFB103AP81534 67 aa23.13■■□□□ 1.29
SSNA1-201ENST00000322310 PTPN11Q06124 597 aaPredicted RBP23.13■■□□□ 1.29
SSNA1-201ENST00000322310 GPNMBQ14956 572 aa23.13■■□□□ 1.29
SSNA1-201ENST00000322310 PTGISQ16647 500 aa23.13■■□□□ 1.29
SSNA1-201ENST00000322310 ZMYM1Q5SVZ6 1142 aa23.13■■□□□ 1.29
SSNA1-201ENST00000322310 C20orf194Q5TEA3 1177 aa23.13■■□□□ 1.29
SSNA1-201ENST00000322310 BTNL9Q6UXG8 535 aa23.13■■□□□ 1.29
SSNA1-201ENST00000322310 RNF207Q6ZRF8 634 aa23.13■■□□□ 1.29
SSNA1-201ENST00000322310 SCFD2Q8WU76 684 aa23.13■■□□□ 1.29
SSNA1-201ENST00000322310 CTAGE1Q96RT6 745 aa23.13■■□□□ 1.29
SSNA1-201ENST00000322310 GPCPD1Q9NPB8 672 aa23.13■■□□□ 1.29
SSNA1-201ENST00000322310 NOVP48745 357 aa23.12■■□□□ 1.29
SSNA1-201ENST00000322310 ZBED2Q9BTP6 218 aa23.12■■□□□ 1.29
SSNA1-201ENST00000322310 FSD1Q9BTV5 496 aa23.12■■□□□ 1.29
SSNA1-201ENST00000322310 PI4K2BG5E9Z4 385 aa23.11■■□□□ 1.29
SSNA1-201ENST00000322310 ARIH2O95376 493 aa23.11■■□□□ 1.29
SSNA1-201ENST00000322310 TXNP10599 105 aaKnown RBP23.11■■□□□ 1.29
SSNA1-201ENST00000322310 EDNRBP24530 442 aa23.11■■□□□ 1.29
SSNA1-201ENST00000322310 RPS6P62753 249 aaKnown RBP23.11■■□□□ 1.29
SSNA1-201ENST00000322310 AFAP1L1Q8TED9 768 aa23.11■■□□□ 1.29
SSNA1-201ENST00000322310 TCTN1Q2MV58 587 aa23.1■■□□□ 1.29
SSNA1-201ENST00000322310 GDF6Q6KF10 455 aaPredicted RBP23.1■■□□□ 1.29
SSNA1-201ENST00000322310 DCTPP1Q9H773 170 aa23.1■■□□□ 1.29
SSNA1-201ENST00000322310 UBE2ZQ9H832 354 aaPredicted RBP23.1■■□□□ 1.29
SSNA1-201ENST00000322310 SUGCTQ9HAC7 445 aa23.1■■□□□ 1.29
SSNA1-201ENST00000322310 VPS53Q5VIR6 699 aa23.09■■□□□ 1.29
SSNA1-201ENST00000322310 CCDC155Q8N6L0 562 aa23.09■■□□□ 1.29
SSNA1-201ENST00000322310 CAGE1Q8TC20 777 aa23.09■■□□□ 1.29
SSNA1-201ENST00000322310 PI4K2BQ8TCG2 481 aa23.09■■□□□ 1.29
SSNA1-201ENST00000322310 DHX38Q92620 1227 aaKnown RBP23.09■■□□□ 1.29
SSNA1-201ENST00000322310 TMEM47Q9BQJ4 181 aa23.09■■□□□ 1.29
SSNA1-201ENST00000322310 LMCD1Q9NZU5 365 aa23.09■■□□□ 1.29
SSNA1-201ENST00000322310 SELPP16109 830 aa23.08■■□□□ 1.29
SSNA1-201ENST00000322310 LRRC8DQ7L1W4 858 aa23.08■■□□□ 1.29
SSNA1-201ENST00000322310 OTUD7AQ8TE49 926 aaPredicted RBP23.08■■□□□ 1.29
SSNA1-201ENST00000322310 AFG1LQ8WV93 481 aa23.08■■□□□ 1.29
SSNA1-201ENST00000322310 MPHOSPH6Q99547 160 aaKnown RBP23.08■■□□□ 1.29
SSNA1-201ENST00000322310 BRWD1Q9NSI6 2320 aa23.08■■□□□ 1.28
SSNA1-201ENST00000322310 NBNO60934 754 aa23.07■■□□□ 1.28
SSNA1-201ENST00000322310 CNKSR3Q6P9H4 555 aa23.07■■□□□ 1.28
SSNA1-201ENST00000322310 DNERQ8NFT8 737 aa23.07■■□□□ 1.28
SSNA1-201ENST00000322310 ANAPC4Q9UJX5 808 aa23.07■■□□□ 1.28
SSNA1-201ENST00000322310 TRIP12Q14669 1992 aaPredicted RBP23.07■■□□□ 1.28
SSNA1-201ENST00000322310 TTC41PQ6P2S7 1318 aa23.07■■□□□ 1.28
SSNA1-201ENST00000322310 LINC01553A4QN01 128 aa23.06■■□□□ 1.28
SSNA1-201ENST00000322310 ORC4O43929 436 aa23.06■■□□□ 1.28
SSNA1-201ENST00000322310 GJB5O95377 273 aa23.06■■□□□ 1.28
SSNA1-201ENST00000322310 MMP3P08254 477 aa23.06■■□□□ 1.28
SSNA1-201ENST00000322310 TOP1P11387 765 aaKnown RBP23.06■■□□□ 1.28
SSNA1-201ENST00000322310 KCNA5P22460 613 aa23.06■■□□□ 1.28
SSNA1-201ENST00000322310 ERVK-21P61565 698 aa23.06■■□□□ 1.28
SSNA1-201ENST00000322310 FAM117BQ6P1L5 589 aa23.06■■□□□ 1.28
SSNA1-201ENST00000322310 CCDC62Q6P9F0 684 aa23.06■■□□□ 1.28
SSNA1-201ENST00000322310 ALYREFQ86V81 257 aaKnown RBP23.06■■□□□ 1.28
SSNA1-201ENST00000322310 KAT2BQ92831 832 aa23.06■■□□□ 1.28
SSNA1-201ENST00000322310 TGS1Q96RS0 853 aaKnown RBP23.06■■□□□ 1.28
SSNA1-201ENST00000322310 RAD9AQ99638 391 aa23.06■■□□□ 1.28
SSNA1-201ENST00000322310 TOMM22Q9NS69 142 aa23.06■■□□□ 1.28
SSNA1-201ENST00000322310 MUC6Q6W4X9 2439 aa23.06■■□□□ 1.28
SSNA1-201ENST00000322310 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.05■■□□□ 1.28
SSNA1-201ENST00000322310 CXCL10P02778 98 aa23.05■■□□□ 1.28
SSNA1-201ENST00000322310 PDHBP11177 359 aa23.05■■□□□ 1.28
SSNA1-201ENST00000322310 CKBP12277 381 aa23.05■■□□□ 1.28
SSNA1-201ENST00000322310 ARHGAP1Q07960 439 aa23.05■■□□□ 1.28
SSNA1-201ENST00000322310 LY6KQ17RY6 165 aa23.05■■□□□ 1.28
SSNA1-201ENST00000322310 RRP12Q5JTH9 1297 aaKnown RBP23.05■■□□□ 1.28
SSNA1-201ENST00000322310 CHST3Q7LGC8 479 aa23.05■■□□□ 1.28
SSNA1-201ENST00000322310 SESTD1Q86VW0 696 aa23.05■■□□□ 1.28
SSNA1-201ENST00000322310 FAM178BQ8IXR5 827 aa23.05■■□□□ 1.28
SSNA1-201ENST00000322310 GJD3Q8N144 294 aa23.05■■□□□ 1.28
SSNA1-201ENST00000322310 IL9P15248 144 aa23.04■■□□□ 1.28
SSNA1-201ENST00000322310 USH1GQ495M9 461 aa23.04■■□□□ 1.28
SSNA1-201ENST00000322310 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.04■■□□□ 1.28
SSNA1-201ENST00000322310 WDR19Q8NEZ3 1342 aa23.04■■□□□ 1.28
SSNA1-201ENST00000322310 ABHD14A-ACY1A0A1B0GW23 586 aa23.03■■□□□ 1.28
SSNA1-201ENST00000322310 FGRP09769 529 aa23.03■■□□□ 1.28
SSNA1-201ENST00000322310 RBL2Q08999 1139 aa23.03■■□□□ 1.28
SSNA1-201ENST00000322310 LEXMQ3ZCV2 418 aa23.03■■□□□ 1.28
SSNA1-201ENST00000322310 SEPT14Q6ZU15 432 aa23.03■■□□□ 1.28
SSNA1-201ENST00000322310 MIER1Q8N108 512 aa23.03■■□□□ 1.28
SSNA1-201ENST00000322310 RCAN3Q9UKA8 241 aa23.03■■□□□ 1.28
SSNA1-201ENST00000322310 PIEZO1Q92508 2521 aa23.02■■□□□ 1.28
SSNA1-201ENST00000322310 PRR33A8MZF0 331 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms