RNA–Protein interactions for RNA: ENST00000321545.4

ZNF543-201, Transcript of zinc finger protein 543, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF543, Length 3,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543-201ENST00000321545 PPFIBP1Q86W92 1011 aa12.69□□□□□ -0.38
ZNF543-201ENST00000321545 GINS2Q9Y248 185 aa12.69□□□□□ -0.38
ZNF543-201ENST00000321545 POTEB3A0JP26 581 aa12.69□□□□□ -0.38
ZNF543-201ENST00000321545 POTECB2RU33 542 aa12.69□□□□□ -0.38
ZNF543-201ENST00000321545 ZSCAN20P17040 1043 aaPredicted RBP12.69□□□□□ -0.38
ZNF543-201ENST00000321545 RPS12P25398 132 aaKnown RBP12.69□□□□□ -0.38
ZNF543-201ENST00000321545 EPHX2P34913 555 aa12.69□□□□□ -0.38
ZNF543-201ENST00000321545 POTEBQ6S5H4 581 aa12.69□□□□□ -0.38
ZNF543-201ENST00000321545 METTL16Q86W50 562 aaKnown RBP12.69□□□□□ -0.38
ZNF543-201ENST00000321545 ZNF280CQ8ND82 737 aa12.69□□□□□ -0.38
ZNF543-201ENST00000321545 RNF146Q9NTX7 359 aa12.69□□□□□ -0.38
ZNF543-201ENST00000321545 E9PMD0 336 aa12.69□□□□□ -0.38
ZNF543-201ENST00000321545 NFIBO00712 420 aa12.69□□□□□ -0.38
ZNF543-201ENST00000321545 IREB2P48200 963 aaKnown RBP12.69□□□□□ -0.38
ZNF543-201ENST00000321545 SHISA4Q96DD7 197 aa12.69□□□□□ -0.38
ZNF543-201ENST00000321545 CLMNQ96JQ2 1002 aa12.69□□□□□ -0.38
ZNF543-201ENST00000321545 MAP3K14Q99558 947 aa12.69□□□□□ -0.38
ZNF543-201ENST00000321545 EHD4Q9H223 541 aa12.69□□□□□ -0.38
ZNF543-201ENST00000321545 RGL1Q9NZL6 768 aa12.69□□□□□ -0.38
ZNF543-201ENST00000321545 TRAF5O00463 557 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 FGRP09769 529 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 SFPQP23246 707 aaKnown RBP eCLIP12.68□□□□□ -0.38
ZNF543-201ENST00000321545 CCDC40Q4G0X9 1142 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 GPBP1Q86WP2 473 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 SYCP3Q8IZU3 236 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 PAGE5Q96GU1 130 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 RMDN3Q96TC7 470 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 XPO4Q9C0E2 1151 aaKnown RBP12.68□□□□□ -0.38
ZNF543-201ENST00000321545 ZMYND12Q9H0C1 365 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 TAB2Q9NYJ8 693 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 MAN1B1Q9UKM7 699 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 POTEFA5A3E0 1075 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 PSMA7O14818 248 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 MYCP01106 439 aaPredicted RBP12.68□□□□□ -0.38
ZNF543-201ENST00000321545 POTEIP0CG38 1075 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 YBX3P16989 372 aaKnown RBP eCLIP12.68□□□□□ -0.38
ZNF543-201ENST00000321545 GALNT17Q6IS24 598 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 POTEGQ6S5H5 508 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 POTEEQ6S8J3 1075 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 ILDR2Q71H61 639 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 RDH13Q8NBN7 331 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 ZNF577Q9BSK1 485 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 DDX60Q8IY21 1712 aaKnown RBP12.68□□□□□ -0.38
ZNF543-201ENST00000321545 PTGER2P43116 358 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 TRAPPC10P48553 1259 aa12.68□□□□□ -0.38
ZNF543-201ENST00000321545 SAMSN1Q9NSI8 373 aaKnown RBP12.68□□□□□ -0.38
ZNF543-201ENST00000321545 RIOK3O14730 519 aaKnown RBP12.67□□□□□ -0.38
ZNF543-201ENST00000321545 PPP1R11O60927 126 aaPredicted RBP12.67□□□□□ -0.38
ZNF543-201ENST00000321545 VCAM1P19320 739 aa12.67□□□□□ -0.38
ZNF543-201ENST00000321545 ATP2C1P98194 919 aaPredicted RBP12.67□□□□□ -0.38
ZNF543-201ENST00000321545 TRAF1Q13077 416 aa12.67□□□□□ -0.38
ZNF543-201ENST00000321545 GPC2Q8N158 579 aa12.67□□□□□ -0.38
ZNF543-201ENST00000321545 SLFN14P0C7P3 912 aa12.67□□□□□ -0.38
ZNF543-201ENST00000321545 GTF2F1P35269 517 aaKnown RBP eCLIP12.67□□□□□ -0.38
ZNF543-201ENST00000321545 FANCCQ00597 558 aa12.67□□□□□ -0.38
ZNF543-201ENST00000321545 BAATQ14032 418 aaPredicted RBP12.67□□□□□ -0.38
ZNF543-201ENST00000321545 KIAA1755Q5JYT7 1200 aa12.67□□□□□ -0.38
ZNF543-201ENST00000321545 RNF207Q6ZRF8 634 aa12.67□□□□□ -0.38
ZNF543-201ENST00000321545 SCLT1Q96NL6 688 aa12.67□□□□□ -0.38
ZNF543-201ENST00000321545 TMX2Q9Y320 296 aa12.67□□□□□ -0.38
ZNF543-201ENST00000321545 HARSP12081 509 aaKnown RBP12.67□□□□□ -0.38
ZNF543-201ENST00000321545 LONP1P36776 959 aaKnown RBP12.67□□□□□ -0.38
ZNF543-201ENST00000321545 ARID5BQ14865 1188 aa12.67□□□□□ -0.38
ZNF543-201ENST00000321545 UTP14CQ5TAP6 766 aaKnown RBP12.67□□□□□ -0.38
ZNF543-201ENST00000321545 RIOX1Q9H6W3 641 aa12.67□□□□□ -0.38
ZNF543-201ENST00000321545 RRAGCQ9HB90 399 aa12.67□□□□□ -0.38
ZNF543-201ENST00000321545 SH3GLB2Q9NR46 395 aa12.67□□□□□ -0.38
ZNF543-201ENST00000321545 TRIM49BA6NDI0 452 aa12.66□□□□□ -0.38
ZNF543-201ENST00000321545 FAM13AO94988 1023 aa12.66□□□□□ -0.38
ZNF543-201ENST00000321545 RPN1P04843 607 aaKnown RBP12.66□□□□□ -0.38
ZNF543-201ENST00000321545 USP14P54578 494 aa12.66□□□□□ -0.38
ZNF543-201ENST00000321545 ARID5AQ03989 594 aa12.66□□□□□ -0.38
ZNF543-201ENST00000321545 FAM83AQ86UY5 434 aa12.66□□□□□ -0.38
ZNF543-201ENST00000321545 NELFBQ8WX92 580 aa12.66□□□□□ -0.38
ZNF543-201ENST00000321545 RIC8AQ9NPQ8 531 aa12.66□□□□□ -0.38
ZNF543-201ENST00000321545 DISC1Q9NRI5 854 aa12.66□□□□□ -0.38
ZNF543-201ENST00000321545 DNM3Q9UQ16 869 aa12.66□□□□□ -0.38
ZNF543-201ENST00000321545 SYNRGQ9UMZ2 1314 aa12.66□□□□□ -0.38
ZNF543-201ENST00000321545 A0A087X0B3 334 aa12.66□□□□□ -0.38
ZNF543-201ENST00000321545 POLR3GO15318 223 aaPredicted RBP12.66□□□□□ -0.38
ZNF543-201ENST00000321545 NAP1L1P55209 391 aaKnown RBP12.66□□□□□ -0.38
ZNF543-201ENST00000321545 BANK1Q8NDB2 785 aa12.66□□□□□ -0.38
ZNF543-201ENST00000321545 DPF2Q92785 391 aa12.66□□□□□ -0.38
ZNF543-201ENST00000321545 ZNF668Q96K58 619 aaPredicted RBP12.66□□□□□ -0.38
ZNF543-201ENST00000321545 ADARB2Q9NS39 739 aaKnown RBP12.66□□□□□ -0.38
ZNF543-201ENST00000321545 NPHP3-ACAD11A0A0J9YXS1 232 aa12.66□□□□□ -0.38
ZNF543-201ENST00000321545 POTEJP0CG39 1038 aa12.66□□□□□ -0.38
ZNF543-201ENST00000321545 CEP135Q66GS9 1140 aa12.66□□□□□ -0.38
ZNF543-201ENST00000321545 MIER3Q7Z3K6 550 aa12.66□□□□□ -0.38
ZNF543-201ENST00000321545 FAM160B2Q86V87 743 aa12.66□□□□□ -0.38
ZNF543-201ENST00000321545 ENGASEQ8NFI3 743 aa12.66□□□□□ -0.38
ZNF543-201ENST00000321545 BHMT2Q9H2M3 363 aa12.66□□□□□ -0.38
ZNF543-201ENST00000321545 CCDC66A2RUB6 948 aa12.65□□□□□ -0.38
ZNF543-201ENST00000321545 CTNND1O60716 968 aaKnown RBP12.65□□□□□ -0.38
ZNF543-201ENST00000321545 ARMC9Q7Z3E5 817 aa12.65□□□□□ -0.38
ZNF543-201ENST00000321545 SCYL3Q8IZE3 742 aa12.65□□□□□ -0.38
ZNF543-201ENST00000321545 CSGALNACT2Q8N6G5 542 aa12.65□□□□□ -0.38
ZNF543-201ENST00000321545 LARP4BQ92615 738 aaKnown RBP12.65□□□□□ -0.38
ZNF543-201ENST00000321545 GMLQ99445 158 aa12.65□□□□□ -0.38
ZNF543-201ENST00000321545 SRRTQ9BXP5 876 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms