RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 MMTAG2Q9BU76 263 aaKnown RBP23.13■■□□□ 1.29
CPNE7-202ENST00000319518 KCNQ5Q9NR82 932 aa23.13■■□□□ 1.29
CPNE7-202ENST00000319518 LCMT1Q9UIC8 334 aa23.13■■□□□ 1.29
CPNE7-202ENST00000319518 PLSCR1O15162 318 aa23.13■■□□□ 1.29
CPNE7-202ENST00000319518 NPR1P16066 1061 aa23.13■■□□□ 1.29
CPNE7-202ENST00000319518 DPP8Q6V1X1 898 aaPredicted RBP23.13■■□□□ 1.29
CPNE7-202ENST00000319518 FAM71BQ8TC56 605 aa23.13■■□□□ 1.29
CPNE7-202ENST00000319518 ZMYND12Q9H0C1 365 aa23.13■■□□□ 1.29
CPNE7-202ENST00000319518 EIF3CLB5ME19 914 aaKnown RBP23.12■■□□□ 1.29
CPNE7-202ENST00000319518 OR52Z1P0C646 297 aa23.12■■□□□ 1.29
CPNE7-202ENST00000319518 ZBED6P86452 979 aa23.12■■□□□ 1.29
CPNE7-202ENST00000319518 SEMA3FQ13275 785 aa23.12■■□□□ 1.29
CPNE7-202ENST00000319518 ZSCAN29Q8IWY8 852 aaPredicted RBP23.12■■□□□ 1.29
CPNE7-202ENST00000319518 KIAA0895Q8NCT3 520 aa23.12■■□□□ 1.29
CPNE7-202ENST00000319518 ZNF622Q969S3 477 aaKnown RBP eCLIP23.12■■□□□ 1.298e-8■□□□□ 10.8
CPNE7-202ENST00000319518 EIF3CQ99613 913 aaKnown RBP23.12■■□□□ 1.29
CPNE7-202ENST00000319518 COA1Q9GZY4 146 aa23.12■■□□□ 1.29
CPNE7-202ENST00000319518 TCP11L1Q9NUJ3 509 aa23.12■■□□□ 1.29
CPNE7-202ENST00000319518 ZNF219Q9P2Y4 722 aaPredicted RBP23.12■■□□□ 1.29
CPNE7-202ENST00000319518 KRT86O43790 486 aa23.12■■□□□ 1.29
CPNE7-202ENST00000319518 ZMYND10O75800 440 aa23.12■■□□□ 1.29
CPNE7-202ENST00000319518 SYF2O95926 243 aaKnown RBP23.12■■□□□ 1.29
CPNE7-202ENST00000319518 PLEKP08567 350 aaPredicted RBP23.12■■□□□ 1.29
CPNE7-202ENST00000319518 LETM2Q2VYF4 491 aa23.12■■□□□ 1.29
CPNE7-202ENST00000319518 C7orf25Q9BPX7 421 aa23.12■■□□□ 1.29
CPNE7-202ENST00000319518 DDX4Q9NQI0 724 aaKnown RBP23.12■■□□□ 1.29
CPNE7-202ENST00000319518 COL11A2P13942 1736 aaPredicted RBP23.11■■□□□ 1.29
CPNE7-202ENST00000319518 CCNT1O60563 726 aaKnown RBP23.11■■□□□ 1.29
CPNE7-202ENST00000319518 SLURP2P0DP57 97 aa23.11■■□□□ 1.29
CPNE7-202ENST00000319518 MYBL2P10244 700 aa23.11■■□□□ 1.29
CPNE7-202ENST00000319518 PLCG2P16885 1265 aa23.11■■□□□ 1.29
CPNE7-202ENST00000319518 CYLC1P35663 651 aaPredicted RBP23.11■■□□□ 1.29
CPNE7-202ENST00000319518 ASIC1P78348 528 aa23.11■■□□□ 1.29
CPNE7-202ENST00000319518 KRT26Q7Z3Y9 468 aa23.11■■□□□ 1.29
CPNE7-202ENST00000319518 RETREG2Q8NC44 543 aa23.11■■□□□ 1.29
CPNE7-202ENST00000319518 CEP95Q96GE4 821 aa23.11■■□□□ 1.29
CPNE7-202ENST00000319518 CUEDC2Q9H467 287 aa23.11■■□□□ 1.29
CPNE7-202ENST00000319518 CCDC170Q8IYT3 715 aa23.11■■□□□ 1.29
CPNE7-202ENST00000319518 AK8Q96MA6 479 aa23.11■■□□□ 1.29
CPNE7-202ENST00000319518 ERGIC2Q96RQ1 377 aa23.11■■□□□ 1.29
CPNE7-202ENST00000319518 NUP58Q9BVL2 599 aa23.11■■□□□ 1.29
CPNE7-202ENST00000319518 SEMA6BQ9H3T3 888 aa23.11■■□□□ 1.29
CPNE7-202ENST00000319518 KLRF2D3W0D1 207 aa23.1■■□□□ 1.29
CPNE7-202ENST00000319518 EPHB6O15197 1021 aa23.1■■□□□ 1.29
CPNE7-202ENST00000319518 USP17L2Q6R6M4 530 aa23.1■■□□□ 1.29
CPNE7-202ENST00000319518 TMC4Q7Z404 712 aa23.1■■□□□ 1.29
CPNE7-202ENST00000319518 CLEC10AQ8IUN9 316 aa23.1■■□□□ 1.29
CPNE7-202ENST00000319518 SLF2Q8IX21 1173 aa23.1■■□□□ 1.29
CPNE7-202ENST00000319518 NOC4LQ9BVI4 516 aaKnown RBP23.1■■□□□ 1.29
CPNE7-202ENST00000319518 MAGEF1Q9HAY2 307 aa23.1■■□□□ 1.29
CPNE7-202ENST00000319518 ADAMTSL1Q8N6G6 1762 aa23.1■■□□□ 1.29
CPNE7-202ENST00000319518 MACROD2A1Z1Q3 448 aa23.1■■□□□ 1.29
CPNE7-202ENST00000319518 TECP42680 631 aa23.1■■□□□ 1.29
CPNE7-202ENST00000319518 FOXR1Q6PIV2 292 aa23.1■■□□□ 1.29
CPNE7-202ENST00000319518 GSPT2Q8IYD1 628 aaKnown RBP23.1■■□□□ 1.29
CPNE7-202ENST00000319518 SMCR8Q8TEV9 937 aaPredicted RBP23.1■■□□□ 1.29
CPNE7-202ENST00000319518 DBNDD1Q9H9R9 158 aa23.1■■□□□ 1.29
CPNE7-202ENST00000319518 HPCAL4Q9UM19 191 aa23.1■■□□□ 1.29
CPNE7-202ENST00000319518 BICDL2A1A5D9 508 aa23.09■■□□□ 1.29
CPNE7-202ENST00000319518 MTIF2P46199 727 aaKnown RBP23.09■■□□□ 1.29
CPNE7-202ENST00000319518 AARSP49588 968 aaKnown RBP eCLIP23.09■■□□□ 1.292e-6■■■□□ 15.6
CPNE7-202ENST00000319518 EHBP1Q8NDI1 1231 aa23.09■■□□□ 1.29
CPNE7-202ENST00000319518 NEDD1Q8NHV4 660 aa23.09■■□□□ 1.29
CPNE7-202ENST00000319518 GDAP1L1Q96MZ0 367 aa23.09■■□□□ 1.29
CPNE7-202ENST00000319518 VIPAS39Q9H9C1 493 aa23.09■■□□□ 1.29
CPNE7-202ENST00000319518 FEZ2Q9UHY8 353 aaPredicted RBP23.09■■□□□ 1.29
CPNE7-202ENST00000319518 NAPAP54920 295 aa23.09■■□□□ 1.29
CPNE7-202ENST00000319518 MED4Q9NPJ6 270 aa23.09■■□□□ 1.29
CPNE7-202ENST00000319518 TARSL2A2RTX5 802 aaKnown RBP23.08■■□□□ 1.29
CPNE7-202ENST00000319518 PRPF6O94906 941 aaKnown RBP23.08■■□□□ 1.29
CPNE7-202ENST00000319518 EIF6P56537 245 aaKnown RBP23.08■■□□□ 1.29
CPNE7-202ENST00000319518 FIGNQ5HY92 759 aa23.08■■□□□ 1.29
CPNE7-202ENST00000319518 CERS3Q8IU89 383 aa23.08■■□□□ 1.29
CPNE7-202ENST00000319518 SPZ1Q9BXG8 430 aa23.08■■□□□ 1.29
CPNE7-202ENST00000319518 FAM204AQ9H8W3 233 aa23.08■■□□□ 1.29
CPNE7-202ENST00000319518 ZNHIT6Q9NWK9 470 aaKnown RBP23.08■■□□□ 1.29
CPNE7-202ENST00000319518 LRWD1Q9UFC0 647 aa23.08■■□□□ 1.29
CPNE7-202ENST00000319518 PCDHAC2Q9Y5I4 1007 aa23.08■■□□□ 1.29
CPNE7-202ENST00000319518 NRXN2Q9P2S2 1712 aa23.08■■□□□ 1.29
CPNE7-202ENST00000319518 A0A1W2PQJ5 194 aa23.08■■□□□ 1.28
CPNE7-202ENST00000319518 PDE6BP35913 854 aa23.08■■□□□ 1.28
CPNE7-202ENST00000319518 VAV2P52735 878 aa23.08■■□□□ 1.28
CPNE7-202ENST00000319518 CDK17Q00537 523 aa23.08■■□□□ 1.28
CPNE7-202ENST00000319518 NONOQ15233 471 aaKnown RBP eCLIP23.08■■□□□ 1.281e-6■■■□□ 16.5
CPNE7-202ENST00000319518 HSP90B2PQ58FF3 399 aa23.08■■□□□ 1.28
CPNE7-202ENST00000319518 ZNF287Q9HBT7 754 aa23.08■■□□□ 1.28
CPNE7-202ENST00000319518 SLC39A2Q9NP94 309 aa23.08■■□□□ 1.28
CPNE7-202ENST00000319518 ARHGAP20Q9P2F6 1191 aa23.08■■□□□ 1.28
CPNE7-202ENST00000319518 ANO9A1A5B4 782 aa23.07■■□□□ 1.28
CPNE7-202ENST00000319518 SMCO2A6NFE2 343 aa23.07■■□□□ 1.28
CPNE7-202ENST00000319518 G3V3G9 751 aa23.07■■□□□ 1.28
CPNE7-202ENST00000319518 RNF40O75150 1001 aa23.07■■□□□ 1.28
CPNE7-202ENST00000319518 ALDH1B1P30837 517 aa23.07■■□□□ 1.28
CPNE7-202ENST00000319518 DCAF8Q5TAQ9 597 aa23.07■■□□□ 1.28
CPNE7-202ENST00000319518 KRT25Q7Z3Z0 450 aa23.07■■□□□ 1.28
CPNE7-202ENST00000319518 POTEDQ86YR6 584 aa23.07■■□□□ 1.28
CPNE7-202ENST00000319518 RIN2Q8WYP3 895 aaPredicted RBP23.07■■□□□ 1.28
CPNE7-202ENST00000319518 MASTLQ96GX5 879 aa23.07■■□□□ 1.28
CPNE7-202ENST00000319518 PCMTD1Q96MG8 357 aaPredicted RBP23.07■■□□□ 1.28
CPNE7-202ENST00000319518 VAT1LQ9HCJ6 419 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms