RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 OR52Z1P0C646 297 aa16.56■□□□□ 0.24
TFE3-201ENST00000315869 GNAQP50148 359 aa16.56■□□□□ 0.24
TFE3-201ENST00000315869 RCSD1Q6JBY9 416 aa16.56■□□□□ 0.24
TFE3-201ENST00000315869 FAM76AQ8TAV0 307 aa16.56■□□□□ 0.24
TFE3-201ENST00000315869 PDGFDQ9GZP0 370 aaPredicted RBP16.56■□□□□ 0.24
TFE3-201ENST00000315869 PSD3Q9NYI0 1048 aa16.56■□□□□ 0.24
TFE3-201ENST00000315869 TBC1D7Q9P0N9 293 aa16.56■□□□□ 0.24
TFE3-201ENST00000315869 NCK2O43639 380 aa16.55■□□□□ 0.24
TFE3-201ENST00000315869 ORC4O43929 436 aa16.55■□□□□ 0.24
TFE3-201ENST00000315869 PAFAH1B1P43034 410 aa16.55■□□□□ 0.24
TFE3-201ENST00000315869 EIF6P56537 245 aaKnown RBP16.55■□□□□ 0.24
TFE3-201ENST00000315869 TTI2Q6NXR4 508 aa16.55■□□□□ 0.24
TFE3-201ENST00000315869 CENPHQ9H3R5 247 aa16.55■□□□□ 0.24
TFE3-201ENST00000315869 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.55■□□□□ 0.24
TFE3-201ENST00000315869 BAZ2AQ9UIF9 1905 aaKnown RBP16.55■□□□□ 0.24
TFE3-201ENST00000315869 NKRFO15226 690 aaKnown RBP eCLIP16.55■□□□□ 0.24
TFE3-201ENST00000315869 EIF4A3P38919 411 aaKnown RBP16.55■□□□□ 0.24
TFE3-201ENST00000315869 MAGEA1P43355 309 aa16.55■□□□□ 0.24
TFE3-201ENST00000315869 GTF2IP78347 998 aa16.55■□□□□ 0.24
TFE3-201ENST00000315869 AMPD3Q01432 767 aa16.55■□□□□ 0.24
TFE3-201ENST00000315869 DNAJC7Q99615 494 aa16.55■□□□□ 0.24
TFE3-201ENST00000315869 HPCAL4Q9UM19 191 aa16.55■□□□□ 0.24
TFE3-201ENST00000315869 LRP5O75197 1615 aa16.55■□□□□ 0.24
TFE3-201ENST00000315869 MYH6P13533 1939 aa16.55■□□□□ 0.24
TFE3-201ENST00000315869 FAM170AA1A519 330 aa16.55■□□□□ 0.24
TFE3-201ENST00000315869 POLRMTO00411 1230 aaKnown RBP16.55■□□□□ 0.24
TFE3-201ENST00000315869 SRGNP10124 158 aa16.55■□□□□ 0.24
TFE3-201ENST00000315869 PCP11498 1178 aaKnown RBP16.55■□□□□ 0.24
TFE3-201ENST00000315869 NONOQ15233 471 aaKnown RBP eCLIP16.55■□□□□ 0.24
TFE3-201ENST00000315869 PTPROQ16827 1216 aa16.55■□□□□ 0.24
TFE3-201ENST00000315869 NFRKBQ6P4R8 1299 aa16.55■□□□□ 0.24
TFE3-201ENST00000315869 IFT81Q8WYA0 676 aa16.55■□□□□ 0.24
TFE3-201ENST00000315869 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.55■□□□□ 0.24
TFE3-201ENST00000315869 NUP58Q9BVL2 599 aa16.55■□□□□ 0.24
TFE3-201ENST00000315869 GIMAP8Q8ND71 665 aaPredicted RBP16.54■□□□□ 0.24
TFE3-201ENST00000315869 COG1Q8WTW3 980 aa16.54■□□□□ 0.24
TFE3-201ENST00000315869 HDAC7Q8WUI4 952 aa16.54■□□□□ 0.24
TFE3-201ENST00000315869 DHTKD1Q96HY7 919 aaPredicted RBP16.54■□□□□ 0.24
TFE3-201ENST00000315869 DUSP9Q99956 384 aaKnown RBP16.54■□□□□ 0.24
TFE3-201ENST00000315869 TRIM9Q9C026 710 aa16.54■□□□□ 0.24
TFE3-201ENST00000315869 KANSL2Q9H9L4 492 aa16.54■□□□□ 0.24
TFE3-201ENST00000315869 GGA1Q9UJY5 639 aa16.54■□□□□ 0.24
TFE3-201ENST00000315869 TNRC6CQ9HCJ0 1690 aaKnown RBP16.54■□□□□ 0.24
TFE3-201ENST00000315869 PDS5AQ29RF7 1337 aaKnown RBP16.54■□□□□ 0.24
TFE3-201ENST00000315869 A0A1W2PQC6 194 aa16.54■□□□□ 0.24
TFE3-201ENST00000315869 PICALMQ13492 652 aa16.54■□□□□ 0.24
TFE3-201ENST00000315869 LRRC31Q6UY01 552 aa16.54■□□□□ 0.24
TFE3-201ENST00000315869 ALS2CR12Q96Q35 445 aa16.54■□□□□ 0.24
TFE3-201ENST00000315869 LRRC1Q9BTT6 524 aa16.54■□□□□ 0.24
TFE3-201ENST00000315869 IL17RBQ9NRM6 502 aa16.54■□□□□ 0.24
TFE3-201ENST00000315869 THSD7AQ9UPZ6 1657 aa16.54■□□□□ 0.24
TFE3-201ENST00000315869 RHOBTB3O94955 611 aa16.54■□□□□ 0.24
TFE3-201ENST00000315869 SCNN1DP51172 638 aa16.54■□□□□ 0.24
TFE3-201ENST00000315869 CCDC40Q4G0X9 1142 aa16.54■□□□□ 0.24
TFE3-201ENST00000315869 SV2BQ7L1I2 683 aa16.54■□□□□ 0.24
TFE3-201ENST00000315869 C4orf32Q8N8J7 132 aa16.54■□□□□ 0.24
TFE3-201ENST00000315869 KCNQ5Q9NR82 932 aa16.54■□□□□ 0.24
TFE3-201ENST00000315869 CAPN6Q9Y6Q1 641 aa16.54■□□□□ 0.24
TFE3-201ENST00000315869 KLRC4O43908 158 aa16.53■□□□□ 0.24
TFE3-201ENST00000315869 RASSF7Q02833 373 aa16.53■□□□□ 0.24
TFE3-201ENST00000315869 MFSD14BQ5SR56 506 aa16.53■□□□□ 0.24
TFE3-201ENST00000315869 WDR93Q6P2C0 686 aa16.53■□□□□ 0.24
TFE3-201ENST00000315869 ZNF507Q8TCN5 953 aa16.53■□□□□ 0.24
TFE3-201ENST00000315869 C6orf50Q9HD87 102 aa16.53■□□□□ 0.24
TFE3-201ENST00000315869 CD209Q9NNX6 404 aa16.53■□□□□ 0.24
TFE3-201ENST00000315869 DMGDHQ9UI17 866 aaKnown RBP16.53■□□□□ 0.24
TFE3-201ENST00000315869 CCT5P48643 541 aa16.53■□□□□ 0.24
TFE3-201ENST00000315869 TNNI2P48788 182 aa16.53■□□□□ 0.24
TFE3-201ENST00000315869 VAV2P52735 878 aa16.53■□□□□ 0.24
TFE3-201ENST00000315869 KCTD16Q68DU8 428 aa16.53■□□□□ 0.24
TFE3-201ENST00000315869 TMC4Q7Z404 712 aa16.53■□□□□ 0.24
TFE3-201ENST00000315869 CCDC155Q8N6L0 562 aa16.53■□□□□ 0.24
TFE3-201ENST00000315869 TBCKQ8TEA7 893 aa16.53■□□□□ 0.24
TFE3-201ENST00000315869 TMEM47Q9BQJ4 181 aa16.53■□□□□ 0.24
TFE3-201ENST00000315869 CICQ96RK0 1608 aaPredicted RBP16.53■□□□□ 0.24
TFE3-201ENST00000315869 EIF3CLB5ME19 914 aaKnown RBP16.52■□□□□ 0.24
TFE3-201ENST00000315869 CYTH3O43739 400 aa16.52■□□□□ 0.24
TFE3-201ENST00000315869 KIF11P52732 1056 aa16.52■□□□□ 0.24
TFE3-201ENST00000315869 EN1Q05925 392 aaPredicted RBP16.52■□□□□ 0.24
TFE3-201ENST00000315869 NOC3LQ8WTT2 800 aaKnown RBP16.52■□□□□ 0.24
TFE3-201ENST00000315869 RBM17Q96I25 401 aaKnown RBP16.52■□□□□ 0.24
TFE3-201ENST00000315869 EIF3CQ99613 913 aaKnown RBP16.52■□□□□ 0.24
TFE3-201ENST00000315869 TMEM260Q9NX78 707 aa16.52■□□□□ 0.24
TFE3-201ENST00000315869 MYH13Q9UKX3 1938 aa16.52■□□□□ 0.24
TFE3-201ENST00000315869 KCNB1Q14721 858 aa16.52■□□□□ 0.24
TFE3-201ENST00000315869 CNNM4Q6P4Q7 775 aa16.52■□□□□ 0.24
TFE3-201ENST00000315869 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.52■□□□□ 0.24
TFE3-201ENST00000315869 MICALL1Q8N3F8 863 aa16.52■□□□□ 0.24
TFE3-201ENST00000315869 TRIM58Q8NG06 486 aa16.52■□□□□ 0.24
TFE3-201ENST00000315869 PCDHA13Q9Y5I0 950 aa16.52■□□□□ 0.24
TFE3-201ENST00000315869 ZEB2O60315 1214 aa16.52■□□□□ 0.23
TFE3-201ENST00000315869 SYF2O95926 243 aaKnown RBP16.52■□□□□ 0.23
TFE3-201ENST00000315869 FECHP22830 423 aa16.52■□□□□ 0.23
TFE3-201ENST00000315869 FRMPD2Q68DX3 1309 aaPredicted RBP16.52■□□□□ 0.23
TFE3-201ENST00000315869 ZNF804AQ7Z570 1209 aa16.52■□□□□ 0.23
TFE3-201ENST00000315869 LRRC15Q8TF66 581 aa16.52■□□□□ 0.23
TFE3-201ENST00000315869 RRP36Q96EU6 259 aaKnown RBP16.52■□□□□ 0.23
TFE3-201ENST00000315869 EHD4Q9H223 541 aa16.52■□□□□ 0.23
TFE3-201ENST00000315869 KBTBD4Q9NVX7 518 aa16.52■□□□□ 0.23
TFE3-201ENST00000315869 G3V3G9 751 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms