RNA–Protein interactions for RNA: ENST00000310571.7

PAAF1-201, Transcript of proteasomal ATPase associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAAF1, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-201ENST00000310571 PPP1R18Q6NYC8 613 aa15.13■□□□□ 0.01
PAAF1-201ENST00000310571 SARM1Q6SZW1 724 aa15.13■□□□□ 0.01
PAAF1-201ENST00000310571 ERO1AQ96HE7 468 aa15.13■□□□□ 0.01
PAAF1-201ENST00000310571 RTFDC1Q9BY42 306 aaPredicted RBP15.13■□□□□ 0.01
PAAF1-201ENST00000310571 ARMCX3Q9UH62 379 aaPredicted RBP15.13■□□□□ 0.01
PAAF1-201ENST00000310571 IVNS1ABPQ9Y6Y0 642 aa15.13■□□□□ 0.01
PAAF1-201ENST00000310571 XRCC5P13010 732 aaKnown RBP15.12■□□□□ 0.01
PAAF1-201ENST00000310571 MAGEA1P43355 309 aa15.12■□□□□ 0.01
PAAF1-201ENST00000310571 DDR1Q08345 913 aa15.12■□□□□ 0.01
PAAF1-201ENST00000310571 ZNF543Q08ER8 600 aa15.12■□□□□ 0.01
PAAF1-201ENST00000310571 BIRC3Q13489 604 aa15.12■□□□□ 0.01
PAAF1-201ENST00000310571 KIAA1524Q8TCG1 905 aa15.12■□□□□ 0.01
PAAF1-201ENST00000310571 LMBR1Q8WVP7 490 aa15.12■□□□□ 0.01
PAAF1-201ENST00000310571 PDLIM2Q96JY6 352 aa15.12■□□□□ 0.01
PAAF1-201ENST00000310571 ARFGAP3Q9NP61 516 aa15.12■□□□□ 0.01
PAAF1-201ENST00000310571 HERC5Q9UII4 1024 aaKnown RBP15.12■□□□□ 0.01
PAAF1-201ENST00000310571 FAM208AQ9UK61 1670 aaKnown RBP15.12■□□□□ 0.01
PAAF1-201ENST00000310571 LEKR1Q6ZMV7 388 aa15.12■□□□□ 0.01
PAAF1-201ENST00000310571 PPP2R2CQ9Y2T4 447 aa15.12■□□□□ 0.01
PAAF1-201ENST00000310571 EEF1GP26641 437 aaKnown RBP15.12■□□□□ 0.01
PAAF1-201ENST00000310571 STRN3Q13033 797 aa15.12■□□□□ 0.01
PAAF1-201ENST00000310571 SEC23AQ15436 765 aa15.12■□□□□ 0.01
PAAF1-201ENST00000310571 OTUD6AQ7L8S5 288 aa15.12■□□□□ 0.01
PAAF1-201ENST00000310571 SMCR8Q8TEV9 937 aaPredicted RBP15.12■□□□□ 0.01
PAAF1-201ENST00000310571 CARD6Q9BX69 1037 aa15.12■□□□□ 0.01
PAAF1-201ENST00000310571 AZI2Q9H6S1 392 aa15.12■□□□□ 0.01
PAAF1-201ENST00000310571 ABCC6O95255 1503 aa15.12■□□□□ 0.01
PAAF1-201ENST00000310571 PPP2R3AQ06190 1150 aa15.12■□□□□ 0.01
PAAF1-201ENST00000310571 FAM102BQ5T8I3 360 aa15.12■□□□□ 0.01
PAAF1-201ENST00000310571 LSM14BQ9BX40 385 aaKnown RBP15.12■□□□□ 0.01
PAAF1-201ENST00000310571 WDR11Q9BZH6 1224 aa15.12■□□□□ 0.01
PAAF1-201ENST00000310571 PARP4Q9UKK3 1724 aaKnown RBP15.11■□□□□ 0.01
PAAF1-201ENST00000310571 POLR3GO15318 223 aaPredicted RBP15.11■□□□□ 0.01
PAAF1-201ENST00000310571 TDP2O95551 362 aa15.11■□□□□ 0.01
PAAF1-201ENST00000310571 PLA2G4BP0C869 781 aa15.11■□□□□ 0.01
PAAF1-201ENST00000310571 SFMBT2Q5VUG0 894 aa15.11■□□□□ 0.01
PAAF1-201ENST00000310571 DEFB132Q7Z7B7 95 aa15.11■□□□□ 0.01
PAAF1-201ENST00000310571 METTL16Q86W50 562 aaKnown RBP15.11■□□□□ 0.01
PAAF1-201ENST00000310571 FBXL16Q8N461 479 aa15.11■□□□□ 0.01
PAAF1-201ENST00000310571 LARSQ9P2J5 1176 aaKnown RBP15.11■□□□□ 0.01
PAAF1-201ENST00000310571 PDHBP11177 359 aa15.11■□□□□ 0.01
PAAF1-201ENST00000310571 KLHL30Q0D2K2 578 aa15.11■□□□□ 0.01
PAAF1-201ENST00000310571 GJA10Q969M2 543 aa15.11■□□□□ 0.01
PAAF1-201ENST00000310571 ZFP91Q96JP5 570 aaPredicted RBP15.11■□□□□ 0.01
PAAF1-201ENST00000310571 SELENOOQ9BVL4 669 aa15.11■□□□□ 0.01
PAAF1-201ENST00000310571 STX10O60499 249 aa15.11■□□□□ 0.01
PAAF1-201ENST00000310571 RHOXF2BP0C7M4 288 aa15.11■□□□□ 0.01
PAAF1-201ENST00000310571 CCNE1P24864 410 aa15.11■□□□□ 0.01
PAAF1-201ENST00000310571 NCAPG2Q86XI2 1143 aa15.11■□□□□ 0.01
PAAF1-201ENST00000310571 VSTM4Q8IW00 320 aa15.11■□□□□ 0.01
PAAF1-201ENST00000310571 RHOXF2Q9BQY4 288 aa15.11■□□□□ 0.01
PAAF1-201ENST00000310571 PDS5AQ29RF7 1337 aaKnown RBP15.11■□□□□ 0.01
PAAF1-201ENST00000310571 IL1R1P14778 569 aa15.11■□□□□ 0.01
PAAF1-201ENST00000310571 COL9A3Q14050 684 aaPredicted RBP15.11■□□□□ 0.01
PAAF1-201ENST00000310571 K7ENM7 598 aa15.1■□□□□ 0.01
PAAF1-201ENST00000310571 DPEP1P16444 411 aa15.1■□□□□ 0.01
PAAF1-201ENST00000310571 ARID5BQ14865 1188 aa15.1■□□□□ 0.01
PAAF1-201ENST00000310571 ODR4Q5SWX8 454 aa15.1■□□□□ 0.01
PAAF1-201ENST00000310571 FMNL3Q8IVF7 1028 aa15.1■□□□□ 0.01
PAAF1-201ENST00000310571 IQCDQ96DY2 449 aa15.1■□□□□ 0.01
PAAF1-201ENST00000310571 BPIFA3Q9BQP9 254 aa15.1■□□□□ 0.01
PAAF1-201ENST00000310571 DNAI2Q9GZS0 605 aa15.1■□□□□ 0.01
PAAF1-201ENST00000310571 RGPD1P0DJD0 1748 aa15.1■□□□□ 0.01
PAAF1-201ENST00000310571 RBL2Q08999 1139 aa15.1■□□□□ 0.01
PAAF1-201ENST00000310571 NTRK3Q16288 839 aa15.1■□□□□ 0.01
PAAF1-201ENST00000310571 USP49Q70CQ1 688 aa15.1■□□□□ 0.01
PAAF1-201ENST00000310571 TMEM110-MUSTN1A8MSY1 372 aa15.1■□□□□ 0.01
PAAF1-201ENST00000310571 ARHGAP4P98171 946 aa15.1■□□□□ 0.01
PAAF1-201ENST00000310571 DHX40Q8IX18 779 aaKnown RBP15.1■□□□□ 0.01
PAAF1-201ENST00000310571 SECISBP2LQ93073 1101 aaKnown RBP15.1■□□□□ 0.01
PAAF1-201ENST00000310571 IL17RAQ96F46 866 aa15.1■□□□□ 0.01
PAAF1-201ENST00000310571 MAP3K14Q99558 947 aa15.1■□□□□ 0.01
PAAF1-201ENST00000310571 ENTPD3O75355 529 aa15.1■□□□□ 0.01
PAAF1-201ENST00000310571 TNFAIP3P21580 790 aa15.1■□□□□ 0.01
PAAF1-201ENST00000310571 RSBN1LQ6PCB5 846 aaPredicted RBP15.1■□□□□ 0.01
PAAF1-201ENST00000310571 SERPINA10Q9UK55 444 aa15.09■□□□□ 0.01
PAAF1-201ENST00000310571 SALL1Q9NSC2 1324 aa15.09■□□□□ 0.01
PAAF1-201ENST00000310571 STXBP3O00186 592 aa15.09■□□□□ 0.01
PAAF1-201ENST00000310571 PSMD14O00487 310 aa15.09■□□□□ 0.01
PAAF1-201ENST00000310571 EIF2AK2P19525 551 aaKnown RBP15.09■□□□□ 0.01
PAAF1-201ENST00000310571 GLG1Q92896 1179 aa15.09■□□□□ 0.01
PAAF1-201ENST00000310571 RIC8AQ9NPQ8 531 aa15.09■□□□□ 0.01
PAAF1-201ENST00000310571 RGPD2P0DJD1 1756 aa15.09■□□□□ 0.01
PAAF1-201ENST00000310571 PSDA5PKW4 1024 aaPredicted RBP15.09■□□□□ 0.01
PAAF1-201ENST00000310571 ETF1P62495 437 aaKnown RBP15.09■□□□□ 0.01
PAAF1-201ENST00000310571 NFIAQ12857 509 aa15.09■□□□□ 0.01
PAAF1-201ENST00000310571 MAD2L2Q9UI95 211 aa15.09■□□□□ 0.01
PAAF1-201ENST00000310571 KRT5P13647 590 aa15.08■□□□□ 0.01
PAAF1-201ENST00000310571 NR2F2P24468 414 aa15.08■□□□□ 0.01
PAAF1-201ENST00000310571 RGS22Q8NE09 1264 aa15.08■□□□□ 0.01
PAAF1-201ENST00000310571 NUCKS1Q9H1E3 243 aaKnown RBP15.08■□□□□ 0.01
PAAF1-201ENST00000310571 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.08■□□□□ 0.012e-8■■■■■ 67.3
PAAF1-201ENST00000310571 FKBP3Q00688 224 aaKnown RBP15.08■□□□□ 0
PAAF1-201ENST00000310571 WDR44Q5JSH3 913 aa15.08■□□□□ 0
PAAF1-201ENST00000310571 IFIH1Q9BYX4 1025 aaKnown RBP15.08■□□□□ 0
PAAF1-201ENST00000310571 MLXIPQ9HAP2 919 aa15.08■□□□□ 0
PAAF1-201ENST00000310571 NYAP2Q9P242 653 aa15.08■□□□□ 0
PAAF1-201ENST00000310571 NDUFB10O96000 172 aa15.08■□□□□ 0
PAAF1-201ENST00000310571 NACC1Q96RE7 527 aa15.08■□□□□ 0
PAAF1-201ENST00000310571 IWS1Q96ST2 819 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms