RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 BUB1O43683 1085 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 ANXA13P27216 316 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 FAM149B1Q96BN6 582 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 CLIC6Q96NY7 704 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 ZBED2Q9BTP6 218 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 CUEDC2Q9H467 287 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 PLEKHA4Q9H4M7 779 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 ZNF233A6NK53 670 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 A6NNZ2 444 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 DIXDC1Q155Q3 683 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 PPP2R5EQ16537 467 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 TUBB8Q3ZCM7 444 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 RFX6Q8HWS3 928 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 VCXQ9H320 206 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 ANKARQ7Z5J8 1434 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 MYL3P08590 195 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 SRGAP2BP0DMP2 458 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 KRT10P13645 584 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 ANKRD20A3Q5VUR7 823 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 DBNLQ9UJU6 430 aaKnown RBP22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 SAR1BQ9Y6B6 198 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 SAT1P21673 171 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 PSMC2P35998 433 aaKnown RBP22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 MICAL1Q8TDZ2 1067 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 U2AF2P26368 475 aaKnown RBP eCLIP22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 KRT71Q3SY84 523 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 MTERF2Q49AM1 385 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 PGBD1Q96JS3 809 aa22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 RNF26Q9BY78 433 aaPredicted RBP22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 CPSF3Q9UKF6 684 aaKnown RBP22.63■■□□□ 1.21
SH3RF3-201ENST00000309415 ELF1P32519 619 aa22.62■■□□□ 1.21
SH3RF3-201ENST00000309415 GARSP41250 739 aaKnown RBP22.62■■□□□ 1.21
SH3RF3-201ENST00000309415 VPS41P49754 854 aa22.62■■□□□ 1.21
SH3RF3-201ENST00000309415 TBC1D10BQ4KMP7 808 aaPredicted RBP22.62■■□□□ 1.21
SH3RF3-201ENST00000309415 NXNQ6DKJ4 435 aa22.62■■□□□ 1.21
SH3RF3-201ENST00000309415 TRAPPC10P48553 1259 aa22.62■■□□□ 1.21
SH3RF3-201ENST00000309415 ADD2P35612 726 aa22.62■■□□□ 1.21
SH3RF3-201ENST00000309415 ANKRD42Q8N9B4 389 aa22.62■■□□□ 1.21
SH3RF3-201ENST00000309415 HYOU1Q9Y4L1 999 aa22.62■■□□□ 1.21
SH3RF3-201ENST00000309415 AATKQ6ZMQ8 1374 aa22.62■■□□□ 1.21
SH3RF3-201ENST00000309415 H2AFZP0C0S5 128 aa22.62■■□□□ 1.21
SH3RF3-201ENST00000309415 H2AFVQ71UI9 128 aa22.62■■□□□ 1.21
SH3RF3-201ENST00000309415 DDX41Q9UJV9 622 aaKnown RBP22.62■■□□□ 1.21
SH3RF3-201ENST00000309415 GBP1P32455 592 aa22.62■■□□□ 1.21
SH3RF3-201ENST00000309415 ZBTB33Q86T24 672 aa22.62■■□□□ 1.21
SH3RF3-201ENST00000309415 PPP1R16BQ96T49 567 aa22.62■■□□□ 1.21
SH3RF3-201ENST00000309415 ARAP3Q8WWN8 1544 aa22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 CFAP65Q6ZU64 1925 aaKnown RBP22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 TFAMQ00059 246 aaKnown RBP22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 MYO1EQ12965 1108 aa22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 MGARPQ8TDB4 240 aa22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 PIGBQ92521 554 aa22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 SLC38A10Q9HBR0 1119 aa22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 USP17L8P0C7I0 530 aa22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 PTPROQ16827 1216 aa22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 TAB3Q8N5C8 712 aaPredicted RBP22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 AK8Q96MA6 479 aa22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 RNF123Q5XPI4 1314 aa22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 ZNF335Q9H4Z2 1342 aaPredicted RBP22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 RGS16O15492 202 aaPredicted RBP22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 ZNF827Q17R98 1081 aa22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 CCDC13Q8IYE1 715 aa22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 LCORLQ8N3X6 602 aa22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 RASGRP4Q8TDF6 673 aa22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 ZNF341Q9BYN7 854 aa22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 TMEM206Q9H813 350 aa22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 ZNF148Q9UQR1 794 aa22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 HEG1Q9ULI3 1381 aa22.61■■□□□ 1.21
SH3RF3-201ENST00000309415 CASQ2O14958 399 aaPredicted RBP22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 PPARDQ03181 441 aa22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 RBBP5Q15291 538 aaKnown RBP22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 TTBK2Q6IQ55 1244 aa22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 TBCKQ8TEA7 893 aa22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 ATG3Q9NT62 314 aa22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 TYW1Q9NV66 732 aaKnown RBP22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 MAD1L1Q9Y6D9 718 aa22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 IGSF1Q8N6C5 1336 aa22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 GSPT1P15170 499 aaKnown RBP22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 ATF2P15336 505 aa22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 STX2P32856 288 aa22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 FOXP4Q8IVH2 680 aaPredicted RBP22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 FOXP1Q9H334 677 aaPredicted RBP22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 TROVE2P10155 538 aaKnown RBP eCLIP22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 RPGRIP1Q96KN7 1286 aa22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 CDKL2Q92772 493 aa22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 TRIM11Q96F44 468 aa22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 TLR7Q9NYK1 1049 aaKnown RBP22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 HEXIM1O94992 359 aaKnown RBP22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 CLIC4Q9Y696 253 aa22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 KDM5DQ9BY66 1539 aa22.6■■□□□ 1.21
SH3RF3-201ENST00000309415 NR2F2P24468 414 aa22.59■■□□□ 1.21
SH3RF3-201ENST00000309415 SCRN1Q12765 414 aa22.59■■□□□ 1.21
SH3RF3-201ENST00000309415 COA7Q96BR5 231 aa22.59■■□□□ 1.21
SH3RF3-201ENST00000309415 LMCD1Q9NZU5 365 aa22.59■■□□□ 1.21
SH3RF3-201ENST00000309415 SLC8A2Q9UPR5 921 aa22.59■■□□□ 1.21
SH3RF3-201ENST00000309415 ECE1P42892 770 aa22.59■■□□□ 1.21
SH3RF3-201ENST00000309415 CAPN12Q6ZSI9 719 aa22.59■■□□□ 1.21
SH3RF3-201ENST00000309415 BBOF1Q8ND07 529 aa22.59■■□□□ 1.21
SH3RF3-201ENST00000309415 BSDC1Q9NW68 430 aaPredicted RBP22.59■■□□□ 1.21
SH3RF3-201ENST00000309415 CDC37Q16543 378 aaPredicted RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms