RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.58□□□□□ -1.52
CAST-201ENST00000309190 FAM212AQ96EL1 285 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 PRDM10Q9NQV6 1147 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 C10orf71Q711Q0 1435 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 PTMAP06454 111 aaKnown RBP5.58□□□□□ -1.52
CAST-201ENST00000309190 PDCP20941 246 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 UBA7P41226 1012 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 CCZ1BP86790 482 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 CCZ1P86791 482 aaPredicted RBP5.58□□□□□ -1.52
CAST-201ENST00000309190 ZNF543Q08ER8 600 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 CTTNQ14247 550 aaKnown RBP5.58□□□□□ -1.52
CAST-201ENST00000309190 SEC23AQ15436 765 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 DEFB115Q30KQ5 88 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 TMTC3Q6ZXV5 915 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 TMTC2Q8N394 836 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 METTL13Q8N6R0 699 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 IL31RAQ8NI17 732 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 GLG1Q92896 1179 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 ASCC2Q9H1I8 757 aaPredicted RBP5.58□□□□□ -1.52
CAST-201ENST00000309190 GAKO14976 1311 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 CNTNAP1P78357 1384 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 COL6A3P12111 3177 aa5.58□□□□□ -1.52
CAST-201ENST00000309190 TNPO2O14787 897 aaKnown RBP5.57□□□□□ -1.52
CAST-201ENST00000309190 PPP1R11O60927 126 aaPredicted RBP5.57□□□□□ -1.52
CAST-201ENST00000309190 NR1I2O75469 434 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 KRT2P35908 639 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 ADCY7P51828 1080 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 LRRC41Q15345 812 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 CCDC144BQ3MJ40 725 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 POTEDQ86YR6 584 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 FBXO16Q8IX29 292 aaPredicted RBP5.57□□□□□ -1.52
CAST-201ENST00000309190 TRMT44Q8IYL2 757 aaKnown RBP5.57□□□□□ -1.52
CAST-201ENST00000309190 SCYL3Q8IZE3 742 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 C17orf53Q8N3J3 647 aaPredicted RBP5.57□□□□□ -1.52
CAST-201ENST00000309190 TMEM60Q9H2L4 133 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 VCPKMTQ9H867 229 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 L2HGDHQ9H9P8 463 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 DEXIO95424 95 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 PABPC4Q13310 644 aaKnown RBP eCLIP5.57□□□□□ -1.52
CAST-201ENST00000309190 CCDC178Q5BJE1 867 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 CHADLQ6NUI6 762 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 FAM117BQ6P1L5 589 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 KSR1Q8IVT5 923 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 DHX40Q8IX18 779 aaKnown RBP5.57□□□□□ -1.52
CAST-201ENST00000309190 BLIDQ8IZY5 108 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 BANK1Q8NDB2 785 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 ZNF512BQ96KM6 892 aaPredicted RBP5.57□□□□□ -1.52
CAST-201ENST00000309190 TMX1Q9H3N1 280 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 C6orf50Q9HD87 102 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 PDGFCQ9NRA1 345 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 R3HCC1Q9Y3T6 440 aaKnown RBP5.57□□□□□ -1.52
CAST-201ENST00000309190 BRWD1Q9NSI6 2320 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 BTBD19C9JJ37 291 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 POTEB2H3BUK9 544 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 KINO60870 393 aaKnown RBP5.57□□□□□ -1.52
CAST-201ENST00000309190 ADCY5O95622 1261 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 GJA5P36382 358 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 MATR3P43243 847 aaKnown RBP eCLIP5.57□□□□□ -1.52
CAST-201ENST00000309190 RESTQ13127 1097 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 KCTD2Q14681 263 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 CCL14Q16627 93 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 CYFIP1Q7L576 1253 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 NELFCDQ8IXH7 590 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 SH3TC2Q8TF17 1288 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 TSC1Q92574 1164 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 CAPNS2Q96L46 248 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 CCDC17Q96LX7 622 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 SLF1Q9BQI6 1058 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 AMNQ9BXJ7 453 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 WDR11Q9BZH6 1224 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 FAM49AQ9H0Q0 323 aaPredicted RBP5.57□□□□□ -1.52
CAST-201ENST00000309190 DDX41Q9UJV9 622 aaKnown RBP5.57□□□□□ -1.52
CAST-201ENST00000309190 SMCHD1A6NHR9 2005 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 ZMYM6O95789 1325 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 SPTLC2O15270 562 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 ENTPD3O75355 529 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 KCNJ6P48051 423 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 OSTNP61366 133 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 COG2Q14746 738 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 RNF207Q6ZRF8 634 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 CHURC1Q8WUH1 139 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 IKZF4Q9H2S9 585 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.57□□□□□ -1.52
CAST-201ENST00000309190 SNCAIPQ9Y6H5 919 aa5.57□□□□□ -1.52
CAST-201ENST00000309190 COL24A1Q17RW2 1714 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 NPHP3-ACAD11A0A0J9YXS1 232 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 PGK1P00558 417 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 H2AFXP16104 143 aaPredicted RBP5.56□□□□□ -1.52
CAST-201ENST00000309190 RPS12P25398 132 aaKnown RBP5.56□□□□□ -1.52
CAST-201ENST00000309190 BEX3Q00994 111 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 TBC1D8BQ0IIM8 1120 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 TTC38Q5R3I4 469 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 MYSM1Q5VVJ2 828 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.56□□□□□ -1.52
CAST-201ENST00000309190 PRPF38AQ8NAV1 312 aaKnown RBP5.56□□□□□ -1.52
CAST-201ENST00000309190 CPLX3Q8WVH0 158 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 TRAPPC12Q8WVT3 735 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 IDI2Q9BXS1 227 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 IRS2Q9Y4H2 1338 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 RP1L1Q8IWN7 2480 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms