RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 MRIQ9BWK5 157 aa11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 IRX2Q9BZI1 471 aaPredicted RBP11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 MYH6P13533 1939 aa11.55□□□□□ -0.56
APOBEC3F-201ENST00000308521 SPDYE2BA6NHP3 402 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 WNT7AO00755 349 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 PPP1R12AO14974 1030 aaPredicted RBP11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 TEX33O43247 280 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 EGFRP00533 1210 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 SPDYE6P0CI01 402 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 SCG2P13521 617 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 PRELPP51888 382 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 HDLBPQ00341 1268 aaKnown RBP11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 CUL4BQ13620 913 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 DLGAP5Q15398 846 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 FILIP1LQ4L180 1135 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 TYW1BQ6NUM6 668 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 SH3RF1Q7Z6J0 888 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 RASGRP4Q8TDF6 673 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 JDP2Q8WYK2 163 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 GMLQ99445 158 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 IDI2Q9BXS1 227 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 PDE11AQ9HCR9 933 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 GPCPD1Q9NPB8 672 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 LZTFL1Q9NQ48 299 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 PCDHB6Q9Y5E3 794 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 NLRP5P59047 1200 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 JAG1P78504 1218 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 NBPF9Q3BBW0 867 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 CERKLQ49MI3 558 aaPredicted RBP11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 ZNF569Q5MCW4 686 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 TMTC1Q8IUR5 882 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 CSRNP1Q96S65 589 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 PNKPQ96T60 521 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 PHF20Q9BVI0 1012 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 PI4KBQ9UBF8 816 aa11.54□□□□□ -0.56
APOBEC3F-201ENST00000308521 PALM3A6NDB9 673 aaPredicted RBP11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 PARP1P09874 1014 aaKnown RBP11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 XBP1P17861 261 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 RRP1BQ14684 758 aaKnown RBP11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 NPY5RQ15761 445 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 KIF4BQ2VIQ3 1234 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 HEATR3Q7Z4Q2 680 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 ABCB6Q9NP58 842 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 PUF60Q9UHX1 559 aaKnown RBP11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 SYNRGQ9UMZ2 1314 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 SEPT2Q15019 361 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 PFKFB3Q16875 520 aaPredicted RBP11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 CCDC178Q5BJE1 867 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 MIGA2Q7L4E1 593 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 GRAMD1CQ8IYS0 662 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 FAM71BQ8TC56 605 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 NAPGQ99747 312 aaPredicted RBP11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 TMEM39BQ9GZU3 492 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 GJA3Q9Y6H8 435 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 EIF3CLB5ME19 914 aaKnown RBP11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 KRT2P35908 639 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 SLC16A2P36021 539 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 TTBK2Q6IQ55 1244 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 KCTD1Q719H9 257 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 SLC35F6Q8N357 371 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 GSDMAQ96QA5 445 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 EIF3CQ99613 913 aaKnown RBP11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 CSRNP2Q9H175 543 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 ACBD3Q9H3P7 528 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 ZSWIM4Q9H7M6 989 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 VPS18Q9P253 973 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 ZNF70Q9UC06 446 aaPredicted RBP11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 SWAP70Q9UH65 585 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 HDAC9Q9UKV0 1011 aa11.53□□□□□ -0.56
APOBEC3F-201ENST00000308521 DLEC1Q9Y238 1755 aa11.52□□□□□ -0.56
APOBEC3F-201ENST00000308521 FOCADQ5VW36 1801 aa11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 CTAGE15A4D2H0 777 aa11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 TTLL1O95922 423 aa11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 CTAGE8P0CG41 777 aa11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 PDHBP11177 359 aa11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 MAP2K1Q02750 393 aaPredicted RBP11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 MCM6Q14566 821 aa11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 SOGA3Q5TF21 947 aa11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 CIAPIN1Q6FI81 312 aa11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 WDR93Q6P2C0 686 aa11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 PIK3AP1Q6ZUJ8 805 aa11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 CTAGE6Q86UF2 777 aa11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 CTAGE4Q8IX94 777 aa11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 PIGSQ96S52 555 aa11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 DHX36Q9H2U1 1008 aaKnown RBP11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 LRRC10BA6NIK2 292 aa11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 PPP1R3GB7ZBB8 358 aa11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 EEF2P13639 858 aaKnown RBP11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 CD44P16070 742 aaKnown RBP11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 TRIM14Q14142 442 aa11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 WWC2Q6AWC2 1192 aa11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 VIPAS39Q9H9C1 493 aa11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 A1CFQ9NQ94 594 aaKnown RBP11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 LIMA1Q9UHB6 759 aaKnown RBP11.52□□□□□ -0.57
APOBEC3F-201ENST00000308521 ZNF646O15015 1829 aaPredicted RBP11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 A0A087WUV0 522 aaPredicted RBP11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 IGKV6D-41A0A0C4DH26 115 aa11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 CCDC189A1A4V9 331 aa11.51□□□□□ -0.57
APOBEC3F-201ENST00000308521 BMP15O95972 392 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms