RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 PIK3CDO00329 1044 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 VWA5AO00534 786 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 IRF6O14896 467 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 SLC37A4O43826 429 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 ZNF202O95125 648 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 DSG3P32926 999 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 PPATQ06203 517 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 AP3B2Q13367 1082 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 COL9A2Q14055 689 aaPredicted RBP7.91□□□□□ -1.14
PTCD2-201ENST00000308077 TREML2Q5T2D2 321 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 LDLRAD1Q5T700 205 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 ARL6IP4Q66PJ3 421 aaKnown RBP7.91□□□□□ -1.14
PTCD2-201ENST00000308077 CHRDL2Q6WN34 429 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 CATSPERGQ6ZRH7 1159 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 ERO1BQ86YB8 467 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 CKAP2LQ8IYA6 745 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 CRYGNQ8WXF5 182 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 EPSTI1Q96J88 318 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 FUCA2Q9BTY2 467 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 TNMDQ9H2S6 317 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 TMOD4Q9NZQ9 345 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 CCPG1Q9ULG6 757 aa7.91□□□□□ -1.14
PTCD2-201ENST00000308077 A0A087X0B3 334 aa7.9□□□□□ -1.14
PTCD2-201ENST00000308077 A0A0G2JLL6 359 aaPredicted RBP7.9□□□□□ -1.14
PTCD2-201ENST00000308077 NEMFO60524 1076 aa7.9□□□□□ -1.14
PTCD2-201ENST00000308077 KINO60870 393 aaKnown RBP7.9□□□□□ -1.14
PTCD2-201ENST00000308077 LETM1O95202 739 aaPredicted RBP7.9□□□□□ -1.14
PTCD2-201ENST00000308077 GJA5P36382 358 aa7.9□□□□□ -1.14
PTCD2-201ENST00000308077 SYKP43405 635 aa7.9□□□□□ -1.14
PTCD2-201ENST00000308077 ARMC9Q7Z3E5 817 aa7.9□□□□□ -1.14
PTCD2-201ENST00000308077 PRRT2Q7Z6L0 340 aaPredicted RBP7.9□□□□□ -1.14
PTCD2-201ENST00000308077 CPXCR1Q8N123 301 aa7.9□□□□□ -1.14
PTCD2-201ENST00000308077 CLEC4DQ8WXI8 215 aa7.9□□□□□ -1.14
PTCD2-201ENST00000308077 ZNF408Q9H9D4 720 aa7.9□□□□□ -1.14
PTCD2-201ENST00000308077 KCNH3Q9ULD8 1083 aa7.9□□□□□ -1.14
PTCD2-201ENST00000308077 ADAMTS5Q9UNA0 930 aa7.9□□□□□ -1.14
PTCD2-201ENST00000308077 MRPL11Q9Y3B7 192 aaKnown RBP7.9□□□□□ -1.14
PTCD2-201ENST00000308077 GOLGA6L3A6NEY3 463 aa7.9□□□□□ -1.15
PTCD2-201ENST00000308077 SPDYE16A6NNV3 312 aaPredicted RBP7.9□□□□□ -1.15
PTCD2-201ENST00000308077 NFIBO00712 420 aa7.9□□□□□ -1.15
PTCD2-201ENST00000308077 CFBP00751 764 aa7.9□□□□□ -1.15
PTCD2-201ENST00000308077 OR52Z1P0C646 297 aa7.9□□□□□ -1.15
PTCD2-201ENST00000308077 PRPHP41219 470 aa7.9□□□□□ -1.15
PTCD2-201ENST00000308077 TRAF1Q13077 416 aa7.9□□□□□ -1.15
PTCD2-201ENST00000308077 PPIL2Q13356 520 aa7.9□□□□□ -1.15
PTCD2-201ENST00000308077 ORC2Q13416 577 aaPredicted RBP7.9□□□□□ -1.15
PTCD2-201ENST00000308077 MOGSQ13724 837 aa7.9□□□□□ -1.15
PTCD2-201ENST00000308077 COG2Q14746 738 aa7.9□□□□□ -1.15
PTCD2-201ENST00000308077 MUM1L1Q5H9M0 696 aa7.9□□□□□ -1.15
PTCD2-201ENST00000308077 PPP4R3AQ6IN85 833 aa7.9□□□□□ -1.15
PTCD2-201ENST00000308077 POTEEQ6S8J3 1075 aa7.9□□□□□ -1.15
PTCD2-201ENST00000308077 ERCC4Q92889 916 aaPredicted RBP7.9□□□□□ -1.15
PTCD2-201ENST00000308077 OPTNQ96CV9 577 aa7.9□□□□□ -1.15
PTCD2-201ENST00000308077 C1QTNF1Q9BXJ1 281 aa7.9□□□□□ -1.15
PTCD2-201ENST00000308077 KCNH4Q9UQ05 1017 aa7.9□□□□□ -1.15
PTCD2-201ENST00000308077 CACNA1BQ00975 2339 aa7.89□□□□□ -1.15
PTCD2-201ENST00000308077 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.89□□□□□ -1.15
PTCD2-201ENST00000308077 GCOM1H8Y6P7 765 aaPredicted RBP7.89□□□□□ -1.15
PTCD2-201ENST00000308077 LAD1O00515 517 aa7.89□□□□□ -1.15
PTCD2-201ENST00000308077 ZBED4O75132 1171 aa7.89□□□□□ -1.15
PTCD2-201ENST00000308077 POLR2MP0CAP2 368 aa7.89□□□□□ -1.15
PTCD2-201ENST00000308077 XRCC6P12956 609 aaKnown RBP eCLIP7.89□□□□□ -1.15
PTCD2-201ENST00000308077 ALAS1P13196 640 aa7.89□□□□□ -1.15
PTCD2-201ENST00000308077 SREBF1P36956 1147 aa7.89□□□□□ -1.15
PTCD2-201ENST00000308077 ARHGAP4P98171 946 aa7.89□□□□□ -1.15
PTCD2-201ENST00000308077 LONRF3Q496Y0 759 aa7.89□□□□□ -1.15
PTCD2-201ENST00000308077 GADL1Q6ZQY3 521 aa7.89□□□□□ -1.15
PTCD2-201ENST00000308077 FCHSD1Q86WN1 690 aa7.89□□□□□ -1.15
PTCD2-201ENST00000308077 MBOAT7Q96N66 472 aa7.89□□□□□ -1.15
PTCD2-201ENST00000308077 MTMR9Q96QG7 549 aa7.89□□□□□ -1.15
PTCD2-201ENST00000308077 PANK2Q9BZ23 570 aa7.89□□□□□ -1.15
PTCD2-201ENST00000308077 RBSNQ9H1K0 784 aa7.89□□□□□ -1.15
PTCD2-201ENST00000308077 FAM13BQ9NYF5 915 aa7.89□□□□□ -1.15
PTCD2-201ENST00000308077 TRPM7Q96QT4 1865 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 SPDYE3A6NKU9 549 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 PP2D1A8MPX8 630 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 CXCL11O14625 94 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 POLR2DO15514 142 aaKnown RBP7.88□□□□□ -1.15
PTCD2-201ENST00000308077 ACTN4O43707 911 aaKnown RBP7.88□□□□□ -1.15
PTCD2-201ENST00000308077 FOSP01100 380 aaPredicted RBP7.88□□□□□ -1.15
PTCD2-201ENST00000308077 FDX1P10109 184 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 CDC25AP30304 524 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 LONP1P36776 959 aaKnown RBP7.88□□□□□ -1.15
PTCD2-201ENST00000308077 HSD17B4P51659 736 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 USP11P51784 963 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 GHRHRQ02643 423 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 TMEM132BQ14DG7 1078 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 CALCRLQ16602 461 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 MCTP2Q6DN12 878 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 DTHD1Q6ZMT9 781 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 KRBA2Q6ZNG9 492 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 TEX2Q8IWB9 1127 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 PDILTQ8N807 584 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 PROCA1Q8NCQ7 364 aaPredicted RBP7.88□□□□□ -1.15
PTCD2-201ENST00000308077 HAS1Q92839 578 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 GJA10Q969M2 543 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 TIGD1Q96MW7 591 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 TSPY26PQ9H489 355 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 HOMER2Q9NSB8 354 aa7.88□□□□□ -1.15
PTCD2-201ENST00000308077 COL20A1Q9P218 1284 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms