RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 CCDC194A0A1B0GVG4 234 aa31.01■■■□□ 2.56
HDAC3-201ENST00000305264 FOSP01100 380 aaPredicted RBP31.01■■■□□ 2.56
HDAC3-201ENST00000305264 FGD4Q96M96 766 aa31.01■■■□□ 2.56
HDAC3-201ENST00000305264 UBXN2AP68543 259 aa31.01■■■□□ 2.55
HDAC3-201ENST00000305264 RMDN3Q96TC7 470 aa31.01■■■□□ 2.55
HDAC3-201ENST00000305264 CIZ1Q9ULV3 898 aaPredicted RBP31.01■■■□□ 2.55
HDAC3-201ENST00000305264 SOWAHBA6NEL2 793 aa31■■■□□ 2.55
HDAC3-201ENST00000305264 F13A1P00488 732 aa31■■■□□ 2.55
HDAC3-201ENST00000305264 PXMP2Q9NR77 195 aa31■■■□□ 2.55
HDAC3-201ENST00000305264 GJD2Q9UKL4 321 aa31■■■□□ 2.55
HDAC3-201ENST00000305264 FRMPD4Q14CM0 1322 aa31■■■□□ 2.55
HDAC3-201ENST00000305264 RPTORQ8N122 1335 aa31■■■□□ 2.55
HDAC3-201ENST00000305264 EIF2AK2P19525 551 aaKnown RBP30.99■■■□□ 2.55
HDAC3-201ENST00000305264 NONOQ15233 471 aaKnown RBP eCLIP30.99■■■□□ 2.55
HDAC3-201ENST00000305264 MCTP2Q6DN12 878 aa30.99■■■□□ 2.55
HDAC3-201ENST00000305264 DDX49Q9Y6V7 483 aaKnown RBP30.99■■■□□ 2.55
HDAC3-201ENST00000305264 MYH15Q9Y2K3 1946 aa30.99■■■□□ 2.55
HDAC3-201ENST00000305264 NUCB2P80303 420 aa30.99■■■□□ 2.55
HDAC3-201ENST00000305264 MAP2K5Q13163 448 aa30.99■■■□□ 2.55
HDAC3-201ENST00000305264 INF2Q27J81 1249 aa30.99■■■□□ 2.55
HDAC3-201ENST00000305264 ZNF792Q3KQV3 632 aa30.99■■■□□ 2.55
HDAC3-201ENST00000305264 TBCKQ8TEA7 893 aa30.99■■■□□ 2.55
HDAC3-201ENST00000305264 USP6NLQ92738 828 aa30.99■■■□□ 2.55
HDAC3-201ENST00000305264 ERO1AQ96HE7 468 aa30.99■■■□□ 2.55
HDAC3-201ENST00000305264 NUDT12Q9BQG2 462 aa30.99■■■□□ 2.55
HDAC3-201ENST00000305264 LRRC37A2A6NM11 1700 aa30.98■■■□□ 2.55
HDAC3-201ENST00000305264 DPP9Q86TI2 863 aa30.98■■■□□ 2.55
HDAC3-201ENST00000305264 IL31RAQ8NI17 732 aa30.98■■■□□ 2.55
HDAC3-201ENST00000305264 SOCS4Q8WXH5 440 aa30.98■■■□□ 2.55
HDAC3-201ENST00000305264 ARHGEF16Q5VV41 709 aa30.97■■■□□ 2.55
HDAC3-201ENST00000305264 MCM3APO60318 1980 aa30.97■■■□□ 2.55
HDAC3-201ENST00000305264 SREBF1P36956 1147 aa30.97■■■□□ 2.55
HDAC3-201ENST00000305264 ALDH5A1P51649 535 aaPredicted RBP30.97■■■□□ 2.55
HDAC3-201ENST00000305264 FAM173BQ6P4H8 233 aa30.97■■■□□ 2.55
HDAC3-201ENST00000305264 BRAPQ7Z569 592 aa30.97■■■□□ 2.55
HDAC3-201ENST00000305264 DNERQ8NFT8 737 aa30.97■■■□□ 2.55
HDAC3-201ENST00000305264 NSUN6Q8TEA1 469 aaKnown RBP30.97■■■□□ 2.55
HDAC3-201ENST00000305264 CHMP5Q9NZZ3 219 aa30.97■■■□□ 2.55
HDAC3-201ENST00000305264 GABRQQ9UN88 632 aa30.97■■■□□ 2.55
HDAC3-201ENST00000305264 FOXN1O15353 648 aa30.96■■■□□ 2.55
HDAC3-201ENST00000305264 NPLOC4Q8TAT6 608 aa30.96■■■□□ 2.55
HDAC3-201ENST00000305264 CRYGNQ8WXF5 182 aa30.96■■■□□ 2.55
HDAC3-201ENST00000305264 PDCD2LQ9BRP1 358 aa30.96■■■□□ 2.55
HDAC3-201ENST00000305264 ARHGAP4P98171 946 aa30.96■■■□□ 2.55
HDAC3-201ENST00000305264 PRKCZQ05513 592 aa30.96■■■□□ 2.55
HDAC3-201ENST00000305264 PGM5Q15124 567 aa30.96■■■□□ 2.55
HDAC3-201ENST00000305264 ZSCAN16Q9H4T2 348 aaPredicted RBP30.96■■■□□ 2.55
HDAC3-201ENST00000305264 EHMT1Q9H9B1 1298 aa30.96■■■□□ 2.55
HDAC3-201ENST00000305264 ADD3Q9UEY8 706 aaKnown RBP30.96■■■□□ 2.55
HDAC3-201ENST00000305264 HTTP42858 3142 aa30.95■■■□□ 2.55
HDAC3-201ENST00000305264 EDIL3O43854 480 aa30.95■■■□□ 2.54
HDAC3-201ENST00000305264 HSPA1AP0DMV8 641 aaKnown RBP30.95■■■□□ 2.54
HDAC3-201ENST00000305264 HSPA1BP0DMV9 641 aaKnown RBP30.95■■■□□ 2.54
HDAC3-201ENST00000305264 CASP8AP2Q9UKL3 1982 aa30.95■■■□□ 2.54
HDAC3-201ENST00000305264 WNT7AO00755 349 aa30.94■■■□□ 2.54
HDAC3-201ENST00000305264 CYP2B6P20813 491 aa30.94■■■□□ 2.54
HDAC3-201ENST00000305264 RGS2P41220 211 aa30.94■■■□□ 2.54
HDAC3-201ENST00000305264 HOXC6P09630 235 aa30.94■■■□□ 2.54
HDAC3-201ENST00000305264 FLT3LGP49771 235 aa30.94■■■□□ 2.54
HDAC3-201ENST00000305264 MYSM1Q5VVJ2 828 aa30.94■■■□□ 2.54
HDAC3-201ENST00000305264 MAML3Q96JK9 1138 aa30.94■■■□□ 2.54
HDAC3-201ENST00000305264 APBA2Q99767 749 aa30.94■■■□□ 2.54
HDAC3-201ENST00000305264 HSPA8P11142 646 aaKnown RBP30.93■■■□□ 2.54
HDAC3-201ENST00000305264 FOXD4L6Q3SYB3 417 aaPredicted RBP30.93■■■□□ 2.54
HDAC3-201ENST00000305264 FOXD4L3Q6VB84 417 aaPredicted RBP30.93■■■□□ 2.54
HDAC3-201ENST00000305264 ZFP91Q96JP5 570 aaPredicted RBP30.93■■■□□ 2.54
HDAC3-201ENST00000305264 TOB1P50616 345 aaPredicted RBP30.92■■■□□ 2.54
HDAC3-201ENST00000305264 NEK8Q86SG6 692 aa30.92■■■□□ 2.54
HDAC3-201ENST00000305264 DIS3Q9Y2L1 958 aaKnown RBP30.92■■■□□ 2.54
HDAC3-201ENST00000305264 NR3C2P08235 984 aa30.92■■■□□ 2.54
HDAC3-201ENST00000305264 ATP2B1P20020 1258 aa30.92■■■□□ 2.54
HDAC3-201ENST00000305264 NBR1Q14596 966 aa30.92■■■□□ 2.54
HDAC3-201ENST00000305264 SLC5A4Q9NY91 659 aa30.92■■■□□ 2.54
HDAC3-201ENST00000305264 SRRDQ9UH36 339 aa30.92■■■□□ 2.54
HDAC3-201ENST00000305264 MYCLP12524 364 aaPredicted RBP30.91■■■□□ 2.54
HDAC3-201ENST00000305264 EDNRBP24530 442 aa30.91■■■□□ 2.54
HDAC3-201ENST00000305264 LETM2Q2VYF4 491 aa30.91■■■□□ 2.54
HDAC3-201ENST00000305264 PCNX4Q63HM2 1172 aa30.91■■■□□ 2.54
HDAC3-201ENST00000305264 CCL14Q16627 93 aa30.9■■■□□ 2.54
HDAC3-201ENST00000305264 ZNF467Q7Z7K2 595 aaPredicted RBP30.9■■■□□ 2.54
HDAC3-201ENST00000305264 IWS1Q96ST2 819 aa30.9■■■□□ 2.54
HDAC3-201ENST00000305264 FLRT1Q9NZU1 646 aa30.9■■■□□ 2.54
HDAC3-201ENST00000305264 CENPFP49454 3210 aa30.9■■■□□ 2.54
HDAC3-201ENST00000305264 MRPS9P82933 396 aaKnown RBP30.9■■■□□ 2.54
HDAC3-201ENST00000305264 NOL7Q9UMY1 257 aaKnown RBP30.9■■■□□ 2.54
HDAC3-201ENST00000305264 GNRH1P01148 92 aa30.89■■■□□ 2.54
HDAC3-201ENST00000305264 CYP3A4P08684 503 aa30.89■■■□□ 2.54
HDAC3-201ENST00000305264 CCND2P30279 289 aa30.89■■■□□ 2.54
HDAC3-201ENST00000305264 VSIG10LQ86VR7 867 aa30.89■■■□□ 2.54
HDAC3-201ENST00000305264 CHAMP1Q96JM3 812 aa30.89■■■□□ 2.54
HDAC3-201ENST00000305264 TDP2O95551 362 aa30.88■■■□□ 2.53
HDAC3-201ENST00000305264 USP11P51784 963 aa30.88■■■□□ 2.53
HDAC3-201ENST00000305264 RILPL1Q5EBL4 403 aa30.88■■■□□ 2.53
HDAC3-201ENST00000305264 ARMCX2Q7L311 632 aa30.88■■■□□ 2.53
HDAC3-201ENST00000305264 HOXD10P28358 340 aa30.88■■■□□ 2.53
HDAC3-201ENST00000305264 TRAPPC10P48553 1259 aa30.88■■■□□ 2.53
HDAC3-201ENST00000305264 OTOP1Q7RTM1 612 aa30.88■■■□□ 2.53
HDAC3-201ENST00000305264 FTOQ9C0B1 505 aaKnown RBP eCLIP30.88■■■□□ 2.53
HDAC3-201ENST00000305264 ASB14A6NK59 587 aa30.87■■■□□ 2.53
HDAC3-201ENST00000305264 FAM86B1E9PN63 330 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms