RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 TRMT44Q8IYL2 757 aaKnown RBP16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 SCYL3Q8IZE3 742 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 CPXCR1Q8N123 301 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 IGSF22Q8N9C0 903 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 SYT17Q9BSW7 474 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 NFE2L3Q9Y4A8 694 aa16.32■□□□□ 0.2
SHCBP1-201ENST00000303383 PAXIP1Q6ZW49 1069 aaPredicted RBP16.31■□□□□ 0.2
SHCBP1-201ENST00000303383 CCDC186Q7Z3E2 898 aa16.31■□□□□ 0.2
SHCBP1-201ENST00000303383 FILIP1Q7Z7B0 1213 aa16.31■□□□□ 0.2
SHCBP1-201ENST00000303383 ZKSCAN4Q969J2 545 aaPredicted RBP16.31■□□□□ 0.2
SHCBP1-201ENST00000303383 MYL1P05976 194 aa16.31■□□□□ 0.2
SHCBP1-201ENST00000303383 HSP90AA4PQ58FG1 418 aa16.31■□□□□ 0.2
SHCBP1-201ENST00000303383 LDHDQ86WU2 507 aa16.31■□□□□ 0.2
SHCBP1-201ENST00000303383 SLFN12Q8IYM2 578 aa16.31■□□□□ 0.2
SHCBP1-201ENST00000303383 FANCLQ9NW38 375 aa16.31■□□□□ 0.2
SHCBP1-201ENST00000303383 ERCC5P28715 1186 aaPredicted RBP16.31■□□□□ 0.2
SHCBP1-201ENST00000303383 CDC25BP30305 580 aa16.31■□□□□ 0.2
SHCBP1-201ENST00000303383 FANCCQ00597 558 aa16.31■□□□□ 0.2
SHCBP1-201ENST00000303383 NCAPHQ15003 741 aa16.31■□□□□ 0.2
SHCBP1-201ENST00000303383 SV2BQ7L1I2 683 aa16.31■□□□□ 0.2
SHCBP1-201ENST00000303383 SMYD4Q8IYR2 804 aaPredicted RBP16.31■□□□□ 0.2
SHCBP1-201ENST00000303383 ABCB11O95342 1321 aa16.3■□□□□ 0.2
SHCBP1-201ENST00000303383 STX17P56962 302 aa16.3■□□□□ 0.2
SHCBP1-201ENST00000303383 UBASH3AP57075 661 aa16.3■□□□□ 0.2
SHCBP1-201ENST00000303383 ASIC1P78348 528 aa16.3■□□□□ 0.2
SHCBP1-201ENST00000303383 STIM1Q13586 685 aa16.3■□□□□ 0.2
SHCBP1-201ENST00000303383 DCPSQ96C86 337 aaKnown RBP16.3■□□□□ 0.2
SHCBP1-201ENST00000303383 PPP2R3BQ9Y5P8 575 aa16.3■□□□□ 0.2
SHCBP1-201ENST00000303383 PTGS1P23219 599 aa16.3■□□□□ 0.2
SHCBP1-201ENST00000303383 ENOX1Q8TC92 643 aaKnown RBP16.3■□□□□ 0.2
SHCBP1-201ENST00000303383 XPO4Q9C0E2 1151 aaKnown RBP16.3■□□□□ 0.2
SHCBP1-201ENST00000303383 CT47A1Q5JQC4 288 aaPredicted RBP16.29■□□□□ 0.2
SHCBP1-201ENST00000303383 ZHX2Q9Y6X8 837 aa16.29■□□□□ 0.2
SHCBP1-201ENST00000303383 SYNRGQ9UMZ2 1314 aa16.29■□□□□ 0.2
SHCBP1-201ENST00000303383 MYH7BA7E2Y1 1941 aa16.29■□□□□ 0.2
SHCBP1-201ENST00000303383 SREBF1P36956 1147 aa16.29■□□□□ 0.2
SHCBP1-201ENST00000303383 CCT6AP40227 531 aaKnown RBP16.29■□□□□ 0.2
SHCBP1-201ENST00000303383 NAALADL2Q58DX5 795 aa16.29■□□□□ 0.2
SHCBP1-201ENST00000303383 MOXD1Q6UVY6 613 aa16.29■□□□□ 0.2
SHCBP1-201ENST00000303383 SULF1Q8IWU6 871 aa16.29■□□□□ 0.2
SHCBP1-201ENST00000303383 GJA10Q969M2 543 aa16.29■□□□□ 0.2
SHCBP1-201ENST00000303383 STK17AQ9UEE5 414 aa16.29■□□□□ 0.2
SHCBP1-201ENST00000303383 FZD1Q9UP38 647 aa16.29■□□□□ 0.2
SHCBP1-201ENST00000303383 ATP1A3P13637 1013 aa16.29■□□□□ 0.2
SHCBP1-201ENST00000303383 DPY19L2Q6NUT2 758 aa16.29■□□□□ 0.2
SHCBP1-201ENST00000303383 ZNF280CQ8ND82 737 aa16.29■□□□□ 0.2
SHCBP1-201ENST00000303383 ADARB2Q9NS39 739 aaKnown RBP16.29■□□□□ 0.2
SHCBP1-201ENST00000303383 EXOC1Q9NV70 894 aa16.29■□□□□ 0.2
SHCBP1-201ENST00000303383 CTNND2Q9UQB3 1225 aa16.29■□□□□ 0.2
SHCBP1-201ENST00000303383 ZBED4O75132 1171 aa16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 SSBP05455 408 aaKnown RBP eCLIP16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 ALAS1P13196 640 aa16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 ZNF658Q5TYW1 1059 aaPredicted RBP16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 MTRQ99707 1265 aa16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 RPAP3Q9H6T3 665 aaPredicted RBP16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 PIK3CDO00329 1044 aa16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 FMR1Q06787 632 aaKnown RBP eCLIP16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 C9orf131Q5VYM1 1079 aa16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 CREBRFQ8IUR6 639 aa16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 ERMNQ8TAM6 284 aa16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 HAS1Q92839 578 aa16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 LRRC27Q9C0I9 530 aa16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 HOMER2Q9NSB8 354 aa16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 KBTBD4Q9NVX7 518 aa16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 NRBP1Q9UHY1 535 aa16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 KDM3AQ9Y4C1 1321 aa16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 VCAM1P19320 739 aa16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 TEX2Q8IWB9 1127 aa16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 HOMEZQ8IX15 550 aa16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 LARP4BQ92615 738 aaKnown RBP16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 AGBL1Q96MI9 1066 aa16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 NT5C3AQ9H0P0 336 aa16.28■□□□□ 0.2
SHCBP1-201ENST00000303383 EDIL3O43854 480 aa16.27■□□□□ 0.2
SHCBP1-201ENST00000303383 ICAM1P05362 532 aa16.27■□□□□ 0.2
SHCBP1-201ENST00000303383 CLCN1P35523 988 aa16.27■□□□□ 0.2
SHCBP1-201ENST00000303383 BACE1P56817 501 aa16.27■□□□□ 0.2
SHCBP1-201ENST00000303383 DGKZQ13574 1117 aa16.27■□□□□ 0.2
SHCBP1-201ENST00000303383 TMC6Q7Z403 805 aa16.27■□□□□ 0.2
SHCBP1-201ENST00000303383 TMOD4Q9NZQ9 345 aa16.27■□□□□ 0.2
SHCBP1-201ENST00000303383 MAPK8IP1Q9UQF2 711 aa16.27■□□□□ 0.2
SHCBP1-201ENST00000303383 ATAD5Q96QE3 1844 aa16.27■□□□□ 0.2
SHCBP1-201ENST00000303383 CYP3A7-CYP3A51PA0A087WV96 503 aa16.27■□□□□ 0.19
SHCBP1-201ENST00000303383 CYP3A7P24462 503 aa16.27■□□□□ 0.19
SHCBP1-201ENST00000303383 HIRAP54198 1017 aaPredicted RBP16.27■□□□□ 0.19
SHCBP1-201ENST00000303383 HAUS3Q68CZ6 603 aa16.27■□□□□ 0.19
SHCBP1-201ENST00000303383 TBC1D5Q92609 795 aa16.27■□□□□ 0.19
SHCBP1-201ENST00000303383 MMTAG2Q9BU76 263 aaKnown RBP16.27■□□□□ 0.19
SHCBP1-201ENST00000303383 BMP2KQ9NSY1 1161 aaPredicted RBP16.27■□□□□ 0.19
SHCBP1-201ENST00000303383 PTPRAP18433 802 aa16.27■□□□□ 0.19
SHCBP1-201ENST00000303383 UBXN2AP68543 259 aa16.27■□□□□ 0.19
SHCBP1-201ENST00000303383 PDE4DQ08499 809 aa16.27■□□□□ 0.19
SHCBP1-201ENST00000303383 PAK1Q13153 545 aa16.27■□□□□ 0.19
SHCBP1-201ENST00000303383 KMT5BQ4FZB7 885 aa16.27■□□□□ 0.19
SHCBP1-201ENST00000303383 NCAPH2Q6IBW4 605 aa16.27■□□□□ 0.19
SHCBP1-201ENST00000303383 MCF2L2Q86YR7 1114 aa16.27■□□□□ 0.19
SHCBP1-201ENST00000303383 RAVER2Q9HCJ3 691 aaKnown RBP16.27■□□□□ 0.19
SHCBP1-201ENST00000303383 OPLAHO14841 1288 aa16.26■□□□□ 0.19
SHCBP1-201ENST00000303383 NRDCO43847 1150 aa16.26■□□□□ 0.19
SHCBP1-201ENST00000303383 HMGCS2P54868 508 aa16.26■□□□□ 0.19
SHCBP1-201ENST00000303383 GRB10Q13322 594 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms