RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 HMGB1P1B2RPK0 211 aaPredicted RBP12.13□□□□□ -0.47
SNX20-201ENST00000300590 PALMO75781 387 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 BMP15O95972 392 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 ASIC1P78348 528 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 STK4Q13043 487 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 TTI2Q6NXR4 508 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 C6orf89Q6UWU4 347 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 TACO1Q9BSH4 297 aaKnown RBP12.13□□□□□ -0.47
SNX20-201ENST00000300590 TRIM31Q9BZY9 425 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 THAP9Q9H5L6 903 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 ABCF2Q9UG63 623 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 HGSO14964 777 aaPredicted RBP12.13□□□□□ -0.47
SNX20-201ENST00000300590 PCCAP05165 728 aaPredicted RBP12.13□□□□□ -0.47
SNX20-201ENST00000300590 CATIPQ7Z7H3 387 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 TBC1D1Q86TI0 1168 aaPredicted RBP12.13□□□□□ -0.47
SNX20-201ENST00000300590 TMTC2Q8N394 836 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 LPIN2Q92539 896 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 SPDL1Q96EA4 605 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 AP1M1Q9BXS5 423 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 SLC39A2Q9NP94 309 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 LRP2BPQ9P2M1 347 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 CNOT8Q9UFF9 292 aaKnown RBP12.13□□□□□ -0.47
SNX20-201ENST00000300590 MAGOHP61326 146 aaKnown RBP12.12□□□□□ -0.47
SNX20-201ENST00000300590 FMNL3Q8IVF7 1028 aa12.12□□□□□ -0.47
SNX20-201ENST00000300590 ARFGAP2Q8N6H7 521 aa12.12□□□□□ -0.47
SNX20-201ENST00000300590 RAPGEF5Q92565 580 aa12.12□□□□□ -0.47
SNX20-201ENST00000300590 MAGOHBQ96A72 148 aaKnown RBP12.12□□□□□ -0.47
SNX20-201ENST00000300590 TCRBV5S4A2TA0A5A2 114 aa12.12□□□□□ -0.47
SNX20-201ENST00000300590 HSD17B3P37058 310 aa12.12□□□□□ -0.47
SNX20-201ENST00000300590 FAM133BQ5BKY9 247 aaKnown RBP12.12□□□□□ -0.47
SNX20-201ENST00000300590 CABLES1Q8TDN4 633 aa12.12□□□□□ -0.47
SNX20-201ENST00000300590 NSMCE1Q8WV22 266 aa12.12□□□□□ -0.47
SNX20-201ENST00000300590 GPKOWQ92917 476 aaPredicted RBP eCLIP12.12□□□□□ -0.47
SNX20-201ENST00000300590 ACTR5Q9H9F9 607 aaPredicted RBP12.12□□□□□ -0.47
SNX20-201ENST00000300590 KANSL2Q9H9L4 492 aa12.12□□□□□ -0.47
SNX20-201ENST00000300590 DISC1Q9NRI5 854 aa12.12□□□□□ -0.47
SNX20-201ENST00000300590 AFDNP55196 1824 aaKnown RBP12.11□□□□□ -0.47
SNX20-201ENST00000300590 SPATA31A3Q5VYP0 1347 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 TLDC2A0PJX2 215 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 ENO4A6NNW6 628 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 NMT2O60551 498 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 UPP2O95045 317 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 CRYMQ14894 314 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 GKAP1Q5VSY0 366 aaPredicted RBP12.11□□□□□ -0.47
SNX20-201ENST00000300590 ENAHQ8N8S7 591 aaPredicted RBP12.11□□□□□ -0.47
SNX20-201ENST00000300590 P2RX5Q93086 422 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 RSRC1Q96IZ7 334 aaKnown RBP12.11□□□□□ -0.47
SNX20-201ENST00000300590 DCAF5Q96JK2 942 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 TMBIM4Q9HC24 238 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 NOD2Q9HC29 1040 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 GDF3Q9NR23 364 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 LTN1O94822 1766 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 MPHOSPH10O00566 681 aaKnown RBP12.11□□□□□ -0.47
SNX20-201ENST00000300590 CDC37Q16543 378 aaPredicted RBP12.11□□□□□ -0.47
SNX20-201ENST00000300590 KRT71Q3SY84 523 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 DTHD1Q6ZMT9 781 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 SPATA5Q8NB90 893 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 MICAL1Q8TDZ2 1067 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 KIF9Q9HAQ2 790 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 PLAGL2Q9UPG8 496 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 ATXN2Q99700 1313 aaKnown RBP12.11□□□□□ -0.47
SNX20-201ENST00000300590 KCNK3O14649 394 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 GLE1Q53GS7 698 aaKnown RBP12.11□□□□□ -0.47
SNX20-201ENST00000300590 NAALADL2Q58DX5 795 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 MIIPQ5JXC2 388 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 PPP4R3AQ6IN85 833 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 ESR2Q92731 530 aa12.11□□□□□ -0.47
SNX20-201ENST00000300590 FLT3P36888 993 aa12.1□□□□□ -0.47
SNX20-201ENST00000300590 IFFO1Q0D2I5 559 aa12.1□□□□□ -0.47
SNX20-201ENST00000300590 RASGRF1Q13972 1273 aa12.1□□□□□ -0.47
SNX20-201ENST00000300590 ZNF662Q6ZS27 426 aa12.1□□□□□ -0.47
SNX20-201ENST00000300590 CEP120Q8N960 986 aa12.1□□□□□ -0.47
SNX20-201ENST00000300590 RETREG2Q8NC44 543 aa12.1□□□□□ -0.47
SNX20-201ENST00000300590 TMEM60Q9H2L4 133 aa12.1□□□□□ -0.47
SNX20-201ENST00000300590 TRAPPC3O43617 180 aa12.1□□□□□ -0.47
SNX20-201ENST00000300590 CEP104O60308 925 aa12.1□□□□□ -0.47
SNX20-201ENST00000300590 PRLRP16471 622 aa12.1□□□□□ -0.47
SNX20-201ENST00000300590 SLC8A1P32418 973 aa12.1□□□□□ -0.47
SNX20-201ENST00000300590 PLCB4Q15147 1175 aa12.1□□□□□ -0.47
SNX20-201ENST00000300590 NPY5RQ15761 445 aa12.1□□□□□ -0.47
SNX20-201ENST00000300590 SELENOSQ9BQE4 189 aa12.1□□□□□ -0.47
SNX20-201ENST00000300590 DPH5Q9H2P9 285 aa12.1□□□□□ -0.47
SNX20-201ENST00000300590 LRRC4CQ9HCJ2 640 aa12.1□□□□□ -0.47
SNX20-201ENST00000300590 RBM28Q9NW13 759 aaKnown RBP12.1□□□□□ -0.47
SNX20-201ENST00000300590 FBXL5Q9UKA1 691 aa12.1□□□□□ -0.47
SNX20-201ENST00000300590 IRF6O14896 467 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 PRPF3O43395 683 aaKnown RBP12.09□□□□□ -0.47
SNX20-201ENST00000300590 KLRC4O43908 158 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 CCNE1P24864 410 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 KLRC1P26715 233 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 MRPL12P52815 198 aaKnown RBP12.09□□□□□ -0.47
SNX20-201ENST00000300590 ERVK-9P63128 1117 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 ITIH3Q06033 890 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.09□□□□□ -0.47
SNX20-201ENST00000300590 CCDC50Q8IVM0 306 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 SRBD1Q8N5C6 995 aaKnown RBP12.09□□□□□ -0.47
SNX20-201ENST00000300590 UHMK1Q8TAS1 419 aaKnown RBP12.09□□□□□ -0.47
SNX20-201ENST00000300590 DDX47Q9H0S4 455 aaKnown RBP12.09□□□□□ -0.47
SNX20-201ENST00000300590 NDST4Q9H3R1 872 aa12.09□□□□□ -0.47
SNX20-201ENST00000300590 EME2A4GXA9 379 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms