RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 CACNA2D3Q8IZS8 1091 aa16.43■□□□□ 0.22
SPIDR-201ENST00000297423 FAM153AQ9UHL3 310 aa16.43■□□□□ 0.22
SPIDR-201ENST00000297423 PLAAQ9Y263 795 aa16.43■□□□□ 0.22
SPIDR-201ENST00000297423 HYOU1Q9Y4L1 999 aa16.43■□□□□ 0.22
SPIDR-201ENST00000297423 PPP1R37O75864 691 aa16.43■□□□□ 0.22
SPIDR-201ENST00000297423 IFNAR2P48551 515 aa16.43■□□□□ 0.22
SPIDR-201ENST00000297423 CHRNDQ07001 517 aa16.43■□□□□ 0.22
SPIDR-201ENST00000297423 TEX11Q8IYF3 940 aa16.43■□□□□ 0.22
SPIDR-201ENST00000297423 LY9Q9HBG7 655 aa16.43■□□□□ 0.22
SPIDR-201ENST00000297423 RMND1Q9NWS8 449 aa16.43■□□□□ 0.22
SPIDR-201ENST00000297423 AMPD2Q01433 879 aa16.43■□□□□ 0.22
SPIDR-201ENST00000297423 MAP3K12Q12852 859 aa16.43■□□□□ 0.22
SPIDR-201ENST00000297423 CATIPQ7Z7H3 387 aa16.43■□□□□ 0.22
SPIDR-201ENST00000297423 CNBD1Q8NA66 436 aa16.43■□□□□ 0.22
SPIDR-201ENST00000297423 DPH5Q9H2P9 285 aa16.43■□□□□ 0.22
SPIDR-201ENST00000297423 EXOC1Q9NV70 894 aa16.43■□□□□ 0.22
SPIDR-201ENST00000297423 NOVA2Q9UNW9 492 aaKnown RBP16.43■□□□□ 0.22
SPIDR-201ENST00000297423 WNK3Q9BYP7 1800 aa16.42■□□□□ 0.22
SPIDR-201ENST00000297423 OPLAHO14841 1288 aa16.42■□□□□ 0.22
SPIDR-201ENST00000297423 IFIT1BQ5T764 474 aaKnown RBP16.42■□□□□ 0.22
SPIDR-201ENST00000297423 PARP9Q8IXQ6 854 aa16.42■□□□□ 0.22
SPIDR-201ENST00000297423 SDR42E1Q8WUS8 393 aa16.42■□□□□ 0.22
SPIDR-201ENST00000297423 HPS3Q969F9 1004 aa16.42■□□□□ 0.22
SPIDR-201ENST00000297423 OSBPL9Q96SU4 736 aa16.42■□□□□ 0.22
SPIDR-201ENST00000297423 NUP188Q5SRE5 1749 aa16.42■□□□□ 0.22
SPIDR-201ENST00000297423 PHF20L1A8MW92 1017 aa16.42■□□□□ 0.22
SPIDR-201ENST00000297423 CEP104O60308 925 aa16.42■□□□□ 0.22
SPIDR-201ENST00000297423 CFAP221Q4G0U5 840 aa16.42■□□□□ 0.22
SPIDR-201ENST00000297423 EARS2Q5JPH6 523 aaKnown RBP16.42■□□□□ 0.22
SPIDR-201ENST00000297423 TRIM68Q6AZZ1 485 aa16.42■□□□□ 0.22
SPIDR-201ENST00000297423 PDE6AP16499 860 aa16.42■□□□□ 0.22
SPIDR-201ENST00000297423 IFNL3Q8IZI9 196 aa16.42■□□□□ 0.22
SPIDR-201ENST00000297423 DDX42Q86XP3 938 aaKnown RBP eCLIP16.41■□□□□ 0.22
SPIDR-201ENST00000297423 SPDL1Q96EA4 605 aa16.41■□□□□ 0.22
SPIDR-201ENST00000297423 PIH1D3Q9NQM4 214 aaKnown RBP16.41■□□□□ 0.22
SPIDR-201ENST00000297423 CCDC194A0A1B0GVG4 234 aa16.41■□□□□ 0.22
SPIDR-201ENST00000297423 PSMD14O00487 310 aa16.41■□□□□ 0.22
SPIDR-201ENST00000297423 ONECUT3O60422 494 aaPredicted RBP16.41■□□□□ 0.22
SPIDR-201ENST00000297423 MCAMP43121 646 aa16.41■□□□□ 0.22
SPIDR-201ENST00000297423 RPS8P62241 208 aaKnown RBP16.41■□□□□ 0.22
SPIDR-201ENST00000297423 MAP2K1Q02750 393 aaPredicted RBP16.41■□□□□ 0.22
SPIDR-201ENST00000297423 FAM167BQ9BTA0 163 aa16.41■□□□□ 0.22
SPIDR-201ENST00000297423 TFCP2L1Q9NZI6 479 aa16.41■□□□□ 0.22
SPIDR-201ENST00000297423 RFX7Q2KHR2 1363 aa16.41■□□□□ 0.22
SPIDR-201ENST00000297423 IFNAR1P17181 557 aa16.41■□□□□ 0.22
SPIDR-201ENST00000297423 AKNAD1Q5T1N1 836 aa16.41■□□□□ 0.22
SPIDR-201ENST00000297423 ARFGAP2Q8N6H7 521 aa16.41■□□□□ 0.22
SPIDR-201ENST00000297423 MGARPQ8TDB4 240 aa16.41■□□□□ 0.22
SPIDR-201ENST00000297423 RPGRQ92834 1020 aaKnown RBP16.41■□□□□ 0.22
SPIDR-201ENST00000297423 KRT23Q9C075 422 aa16.41■□□□□ 0.22
SPIDR-201ENST00000297423 EPN3Q9H201 632 aa16.41■□□□□ 0.22
SPIDR-201ENST00000297423 FOXP1Q9H334 677 aaPredicted RBP16.41■□□□□ 0.22
SPIDR-201ENST00000297423 ATRNO75882 1429 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 KIF1CO43896 1103 aaKnown RBP16.4■□□□□ 0.22
SPIDR-201ENST00000297423 APBA3O96018 575 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 CPP00450 1065 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 TRADDQ15628 312 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 DYMQ7RTS9 669 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 CRACR2BQ8N4Y2 399 aaPredicted RBP16.4■□□□□ 0.22
SPIDR-201ENST00000297423 AP1M1Q9BXS5 423 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 CD2APQ9Y5K6 639 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 CYP2D7A0A087X1C5 515 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 SARSP49591 514 aaKnown RBP16.4■□□□□ 0.22
SPIDR-201ENST00000297423 FMNL3Q8IVF7 1028 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 MYCBPAPQ8TBZ2 947 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 CNOT6LQ96LI5 555 aaKnown RBP16.4■□□□□ 0.22
SPIDR-201ENST00000297423 GOLPH3Q9H4A6 298 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 KANSL2Q9H9L4 492 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 SNX12Q9UMY4 172 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 PCDHA13Q9Y5I0 950 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 H7C1D1 291 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 KCNK3O14649 394 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 PLEKHA8P1O95397 391 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 DNM2P50570 870 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 CDK5RAP3Q96JB5 506 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 NOX5Q96PH1 765 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 SLC39A2Q9NP94 309 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 SEPT11Q9NVA2 429 aaKnown RBP16.4■□□□□ 0.22
SPIDR-201ENST00000297423 RWDD2AQ9UIY3 292 aa16.4■□□□□ 0.22
SPIDR-201ENST00000297423 TARSL2A2RTX5 802 aaKnown RBP16.39■□□□□ 0.21
SPIDR-201ENST00000297423 GFPT1Q06210 699 aaPredicted RBP16.39■□□□□ 0.21
SPIDR-201ENST00000297423 SLC27A3Q5K4L6 730 aa16.39■□□□□ 0.21
SPIDR-201ENST00000297423 SPATA5Q8NB90 893 aa16.39■□□□□ 0.21
SPIDR-201ENST00000297423 SAMD1Q6SPF0 538 aaPredicted RBP16.39■□□□□ 0.21
SPIDR-201ENST00000297423 CCDC170Q8IYT3 715 aa16.39■□□□□ 0.21
SPIDR-201ENST00000297423 IGDCC4Q8TDY8 1250 aa16.39■□□□□ 0.21
SPIDR-201ENST00000297423 YIPF3Q9GZM5 350 aa16.39■□□□□ 0.21
SPIDR-201ENST00000297423 VAT1LQ9HCJ6 419 aa16.39■□□□□ 0.21
SPIDR-201ENST00000297423 ANKIB1Q9P2G1 1089 aa16.39■□□□□ 0.21
SPIDR-201ENST00000297423 TCP1P17987 556 aaKnown RBP16.39■□□□□ 0.21
SPIDR-201ENST00000297423 RXRBP28702 533 aa16.39■□□□□ 0.21
SPIDR-201ENST00000297423 BCAMP50895 628 aa16.39■□□□□ 0.21
SPIDR-201ENST00000297423 KIF11P52732 1056 aa16.39■□□□□ 0.21
SPIDR-201ENST00000297423 PMS1P54277 932 aaKnown RBP16.39■□□□□ 0.21
SPIDR-201ENST00000297423 RAPGEF1Q13905 1077 aa16.39■□□□□ 0.21
SPIDR-201ENST00000297423 SF3B3Q15393 1217 aaKnown RBP16.39■□□□□ 0.21
SPIDR-201ENST00000297423 CDKAL1Q5VV42 579 aa16.39■□□□□ 0.21
SPIDR-201ENST00000297423 ALS2CLQ60I27 953 aa16.39■□□□□ 0.21
SPIDR-201ENST00000297423 TJP1Q07157 1748 aa16.38■□□□□ 0.21
SPIDR-201ENST00000297423 GLI1P08151 1106 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms