RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 TOB1P50616 345 aaPredicted RBP17.29■□□□□ 0.36
CCDC140-201ENST00000295226 LACTBP83111 547 aaPredicted RBP17.29■□□□□ 0.36
CCDC140-201ENST00000295226 NONOQ15233 471 aaKnown RBP eCLIP17.29■□□□□ 0.36
CCDC140-201ENST00000295226 IL31RAQ8NI17 732 aa17.29■□□□□ 0.36
CCDC140-201ENST00000295226 TRIM47Q96LD4 638 aa17.29■□□□□ 0.36
CCDC140-201ENST00000295226 RMDN3Q96TC7 470 aa17.29■□□□□ 0.36
CCDC140-201ENST00000295226 BEGAINQ9BUH8 593 aa17.29■□□□□ 0.36
CCDC140-201ENST00000295226 FTOQ9C0B1 505 aaKnown RBP eCLIP17.29■□□□□ 0.36
CCDC140-201ENST00000295226 ZSCAN16Q9H4T2 348 aaPredicted RBP17.29■□□□□ 0.36
CCDC140-201ENST00000295226 WBP1LQ9NX94 342 aa17.29■□□□□ 0.36
CCDC140-201ENST00000295226 TFIP11Q9UBB9 837 aaKnown RBP17.29■□□□□ 0.36
CCDC140-201ENST00000295226 DNAJC25-GNG10A0A024R161 153 aa17.28■□□□□ 0.36
CCDC140-201ENST00000295226 TNPO2O14787 897 aaKnown RBP17.28■□□□□ 0.36
CCDC140-201ENST00000295226 AP3B2Q13367 1082 aa17.28■□□□□ 0.36
CCDC140-201ENST00000295226 MYSM1Q5VVJ2 828 aa17.28■□□□□ 0.36
CCDC140-201ENST00000295226 FAM133AQ8N9E0 248 aa17.28■□□□□ 0.36
CCDC140-201ENST00000295226 CD99L2Q8TCZ2 262 aa17.28■□□□□ 0.36
CCDC140-201ENST00000295226 TNPO1Q92973 898 aaKnown RBP17.28■□□□□ 0.36
CCDC140-201ENST00000295226 MAP3K20Q9NYL2 800 aaKnown RBP17.28■□□□□ 0.36
CCDC140-201ENST00000295226 PFASO15067 1338 aa17.28■□□□□ 0.36
CCDC140-201ENST00000295226 STRNO43815 780 aa17.27■□□□□ 0.36
CCDC140-201ENST00000295226 FOSP01100 380 aaPredicted RBP17.27■□□□□ 0.36
CCDC140-201ENST00000295226 CEBPZQ03701 1054 aaKnown RBP17.27■□□□□ 0.36
CCDC140-201ENST00000295226 DNM1Q05193 864 aaKnown RBP17.27■□□□□ 0.36
CCDC140-201ENST00000295226 GRB14Q14449 540 aa17.27■□□□□ 0.36
CCDC140-201ENST00000295226 ARHGEF16Q5VV41 709 aa17.27■□□□□ 0.36
CCDC140-201ENST00000295226 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.27■□□□□ 0.36
CCDC140-201ENST00000295226 BRAPQ7Z569 592 aa17.27■□□□□ 0.36
CCDC140-201ENST00000295226 FGD4Q96M96 766 aa17.27■□□□□ 0.36
CCDC140-201ENST00000295226 PXMP2Q9NR77 195 aa17.27■□□□□ 0.36
CCDC140-201ENST00000295226 SAGE1Q9NXZ1 904 aa17.27■□□□□ 0.36
CCDC140-201ENST00000295226 MGAMO43451 1857 aa17.27■□□□□ 0.35
CCDC140-201ENST00000295226 ARHGAP4P98171 946 aa17.26■□□□□ 0.35
CCDC140-201ENST00000295226 ZNF174Q15697 407 aa17.26■□□□□ 0.35
CCDC140-201ENST00000295226 LETM2Q2VYF4 491 aa17.26■□□□□ 0.35
CCDC140-201ENST00000295226 MORN1Q5T089 497 aa17.26■□□□□ 0.35
CCDC140-201ENST00000295226 CLEC17AQ6ZS10 378 aa17.26■□□□□ 0.35
CCDC140-201ENST00000295226 DPP9Q86TI2 863 aa17.26■□□□□ 0.35
CCDC140-201ENST00000295226 SAMD3Q8N6K7 520 aa17.26■□□□□ 0.35
CCDC140-201ENST00000295226 ZNF296Q8WUU4 475 aaPredicted RBP17.26■□□□□ 0.35
CCDC140-201ENST00000295226 UIMC1Q96RL1 719 aa17.26■□□□□ 0.35
CCDC140-201ENST00000295226 PCDHB6Q9Y5E3 794 aa17.26■□□□□ 0.35
CCDC140-201ENST00000295226 SLC15A5A6NIM6 579 aa17.26■□□□□ 0.35
CCDC140-201ENST00000295226 MYCLP12524 364 aaPredicted RBP17.26■□□□□ 0.35
CCDC140-201ENST00000295226 SREBF1P36956 1147 aa17.26■□□□□ 0.35
CCDC140-201ENST00000295226 FCGRTP55899 365 aa17.26■□□□□ 0.35
CCDC140-201ENST00000295226 NPLOC4Q8TAT6 608 aa17.26■□□□□ 0.35
CCDC140-201ENST00000295226 CYP2W1Q8TAV3 490 aa17.26■□□□□ 0.35
CCDC140-201ENST00000295226 RTEL1Q9NZ71 1219 aa17.26■□□□□ 0.35
CCDC140-201ENST00000295226 GJD2Q9UKL4 321 aa17.26■□□□□ 0.35
CCDC140-201ENST00000295226 GABRQQ9UN88 632 aa17.26■□□□□ 0.35
CCDC140-201ENST00000295226 CLIC4Q9Y696 253 aa17.26■□□□□ 0.35
CCDC140-201ENST00000295226 TCHHQ07283 1943 aa17.25■□□□□ 0.35
CCDC140-201ENST00000295226 RPTORQ8N122 1335 aa17.25■□□□□ 0.35
CCDC140-201ENST00000295226 TDP2O95551 362 aa17.25■□□□□ 0.35
CCDC140-201ENST00000295226 CYP2B6P20813 491 aa17.25■□□□□ 0.35
CCDC140-201ENST00000295226 ALDH5A1P51649 535 aaPredicted RBP17.25■□□□□ 0.35
CCDC140-201ENST00000295226 PGM5Q15124 567 aa17.25■□□□□ 0.35
CCDC140-201ENST00000295226 ZNF792Q3KQV3 632 aa17.25■□□□□ 0.35
CCDC140-201ENST00000295226 NEK8Q86SG6 692 aa17.25■□□□□ 0.35
CCDC140-201ENST00000295226 ABRAQ8N0Z2 381 aa17.25■□□□□ 0.35
CCDC140-201ENST00000295226 NSUN6Q8TEA1 469 aaKnown RBP17.25■□□□□ 0.35
CCDC140-201ENST00000295226 CRYGNQ8WXF5 182 aa17.25■□□□□ 0.35
CCDC140-201ENST00000295226 USP28Q96RU2 1077 aa17.25■□□□□ 0.35
CCDC140-201ENST00000295226 PDCD2LQ9BRP1 358 aa17.25■□□□□ 0.35
CCDC140-201ENST00000295226 GOLGA6L22H0YM25 854 aa17.24■□□□□ 0.35
CCDC140-201ENST00000295226 CCNT1O60563 726 aaKnown RBP17.24■□□□□ 0.35
CCDC140-201ENST00000295226 FKTNO75072 461 aa17.24■□□□□ 0.35
CCDC140-201ENST00000295226 NCLP19338 710 aaKnown RBP17.24■□□□□ 0.35
CCDC140-201ENST00000295226 MCM7P33993 719 aa17.24■□□□□ 0.35
CCDC140-201ENST00000295226 MAP2K5Q13163 448 aa17.24■□□□□ 0.35
CCDC140-201ENST00000295226 SKOR2Q2VWA4 1001 aaPredicted RBP17.24■□□□□ 0.35
CCDC140-201ENST00000295226 TTC38Q5R3I4 469 aa17.24■□□□□ 0.35
CCDC140-201ENST00000295226 MRVI1Q9Y6F6 885 aa17.24■□□□□ 0.35
CCDC140-201ENST00000295226 MCM3APO60318 1980 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 NR3C2P08235 984 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 MRPS9P82933 396 aaKnown RBP17.23■□□□□ 0.35
CCDC140-201ENST00000295226 KIF22Q14807 665 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 MCTP2Q6DN12 878 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 USP6NLQ92738 828 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 NUDT12Q9BQG2 462 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 EHMT1Q9H9B1 1298 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 NOL7Q9UMY1 257 aaKnown RBP17.23■□□□□ 0.35
CCDC140-201ENST00000295226 CNPY2Q9Y2B0 182 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 PLXNA1Q9UIW2 1896 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 FRMPD4Q14CM0 1322 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 FAM86B1E9PN63 330 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 FAM86B2P0C5J1 330 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 ZNF76P36508 570 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 PRKCZQ05513 592 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 CCL14Q16627 93 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 RILPL1Q5EBL4 403 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 EEPD1Q7L9B9 569 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 TEX2Q8IWB9 1127 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 DNERQ8NFT8 737 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 MAF1Q9H063 256 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 GDPD2Q9HCC8 539 aa17.23■□□□□ 0.35
CCDC140-201ENST00000295226 MYH15Q9Y2K3 1946 aa17.22■□□□□ 0.35
CCDC140-201ENST00000295226 SLC37A4O43826 429 aa17.22■□□□□ 0.35
CCDC140-201ENST00000295226 FLT3LGP49771 235 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms