RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 MAD2L2Q9UI95 211 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 ODF2LQ9ULJ1 636 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 TRIM21P19474 475 aaKnown RBP13.38□□□□□ -0.27
CLPB-201ENST00000294053 SBK1Q52WX2 424 aa13.38□□□□□ -0.27
CLPB-201ENST00000294053 MAATS1Q7Z4T9 603 aa13.38□□□□□ -0.27
CLPB-201ENST00000294053 SPATA20Q8TB22 786 aa13.38□□□□□ -0.27
CLPB-201ENST00000294053 TTC26A0AVF1 554 aa13.38□□□□□ -0.27
CLPB-201ENST00000294053 E7EVH7 732 aa13.38□□□□□ -0.27
CLPB-201ENST00000294053 F8W031 263 aaPredicted RBP13.38□□□□□ -0.27
CLPB-201ENST00000294053 BTDP43251 543 aa13.38□□□□□ -0.27
CLPB-201ENST00000294053 TUBB4BP68371 445 aa13.38□□□□□ -0.27
CLPB-201ENST00000294053 ATP2C1P98194 919 aaPredicted RBP13.38□□□□□ -0.27
CLPB-201ENST00000294053 CUL4BQ13620 913 aa13.38□□□□□ -0.27
CLPB-201ENST00000294053 PPP2R5BQ15173 497 aa13.38□□□□□ -0.27
CLPB-201ENST00000294053 HEATR3Q7Z4Q2 680 aa13.38□□□□□ -0.27
CLPB-201ENST00000294053 TRPC5Q9UL62 973 aaPredicted RBP13.38□□□□□ -0.27
CLPB-201ENST00000294053 GOLGA6L7A0A1B0GV03 622 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 MYO1BO43795 1136 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 SF3B2Q13435 895 aaKnown RBP13.37□□□□□ -0.27
CLPB-201ENST00000294053 ENOX2Q16206 610 aaKnown RBP13.37□□□□□ -0.27
CLPB-201ENST00000294053 ODF2Q5BJF6 829 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 CEP85LQ5SZL2 805 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 RPGRQ92834 1020 aaKnown RBP13.37□□□□□ -0.27
CLPB-201ENST00000294053 RTFDC1Q9BY42 306 aaPredicted RBP13.37□□□□□ -0.27
CLPB-201ENST00000294053 LACRTQ9GZZ8 138 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 TMEM60Q9H2L4 133 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 POLLQ9UGP5 575 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 PPP1R12BO60237 982 aaPredicted RBP13.37□□□□□ -0.27
CLPB-201ENST00000294053 GYS1P13807 737 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 NNTQ13423 1086 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 KRT26Q7Z3Y9 468 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 TBC1D31Q96DN5 1066 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 MXD3Q9BW11 206 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 CD209Q9NNX6 404 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 ZNHIT6Q9NWK9 470 aaKnown RBP13.37□□□□□ -0.27
CLPB-201ENST00000294053 KRT86O43790 486 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 RASA1P20936 1047 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 PAX7P23759 505 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 MMP14P50281 582 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 CLNS1AP54105 237 aaKnown RBP13.37□□□□□ -0.27
CLPB-201ENST00000294053 CKAP4Q07065 602 aaKnown RBP13.37□□□□□ -0.27
CLPB-201ENST00000294053 INF2Q27J81 1249 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 USP17L2Q6R6M4 530 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 B4GALNT4Q76KP1 1039 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 SEPT12Q8IYM1 358 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 TMEM47Q9BQJ4 181 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 VAT1LQ9HCJ6 419 aa13.37□□□□□ -0.27
CLPB-201ENST00000294053 TRIM49BA6NDI0 452 aa13.36□□□□□ -0.27
CLPB-201ENST00000294053 KCNJ18B7U540 433 aa13.36□□□□□ -0.27
CLPB-201ENST00000294053 RIMBP2O15034 1052 aa13.36□□□□□ -0.27
CLPB-201ENST00000294053 OPA1O60313 960 aa13.36□□□□□ -0.27
CLPB-201ENST00000294053 CPP00450 1065 aa13.36□□□□□ -0.27
CLPB-201ENST00000294053 PCP11498 1178 aaKnown RBP13.36□□□□□ -0.27
CLPB-201ENST00000294053 COPB1P53618 953 aaKnown RBP13.36□□□□□ -0.27
CLPB-201ENST00000294053 EIF6P56537 245 aaKnown RBP13.36□□□□□ -0.27
CLPB-201ENST00000294053 KCNJ12Q14500 433 aa13.36□□□□□ -0.27
CLPB-201ENST00000294053 SH3RF1Q7Z6J0 888 aa13.36□□□□□ -0.27
CLPB-201ENST00000294053 WDR66Q8TBY9 1149 aa13.36□□□□□ -0.27
CLPB-201ENST00000294053 QTRT2Q9H974 415 aaKnown RBP13.36□□□□□ -0.27
CLPB-201ENST00000294053 PDS5AQ29RF7 1337 aaKnown RBP13.36□□□□□ -0.27
CLPB-201ENST00000294053 ERCC5P28715 1186 aaPredicted RBP13.36□□□□□ -0.27
CLPB-201ENST00000294053 AARSP49588 968 aaKnown RBP eCLIP13.36□□□□□ -0.27
CLPB-201ENST00000294053 PTPROQ16827 1216 aa13.36□□□□□ -0.27
CLPB-201ENST00000294053 MFSD14BQ5SR56 506 aa13.36□□□□□ -0.27
CLPB-201ENST00000294053 APTXQ7Z2E3 356 aaKnown RBP13.36□□□□□ -0.27
CLPB-201ENST00000294053 OR8K1Q8NGG5 319 aa13.36□□□□□ -0.27
CLPB-201ENST00000294053 LRRC15Q8TF66 581 aa13.36□□□□□ -0.27
CLPB-201ENST00000294053 VIPAS39Q9H9C1 493 aa13.36□□□□□ -0.27
CLPB-201ENST00000294053 VEZTQ9HBM0 779 aa13.36□□□□□ -0.27
CLPB-201ENST00000294053 SERPINB2P05120 415 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 GBP2P32456 591 aaPredicted RBP13.35□□□□□ -0.27
CLPB-201ENST00000294053 PEX19P40855 299 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 GSCP56915 257 aaPredicted RBP13.35□□□□□ -0.27
CLPB-201ENST00000294053 AMPD2Q01433 879 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 SPTY2D1Q68D10 685 aaPredicted RBP13.35□□□□□ -0.27
CLPB-201ENST00000294053 TRAPPC11Q7Z392 1133 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 BLIDQ8IZY5 108 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 TSEN2Q8NCE0 465 aaKnown RBP13.35□□□□□ -0.27
CLPB-201ENST00000294053 CCDC43Q96MW1 224 aaKnown RBP13.35□□□□□ -0.27
CLPB-201ENST00000294053 GDAQ9Y2T3 454 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 FAM170AA1A519 330 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 PDHBP11177 359 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 DDR1Q08345 913 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 PICALMQ13492 652 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 NEDD9Q14511 834 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 CFAP58Q5T655 872 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 LRCH2Q5VUJ6 765 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 KANK3Q6NY19 840 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 ZNF804AQ7Z570 1209 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 ZNF444Q8N0Y2 327 aaPredicted RBP13.35□□□□□ -0.27
CLPB-201ENST00000294053 NELFBQ8WX92 580 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 FAM184BQ9ULE4 1060 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 REXO2Q9Y3B8 237 aaKnown RBP13.35□□□□□ -0.27
CLPB-201ENST00000294053 PPP1R3GB7ZBB8 358 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 MEFVO15553 781 aaPredicted RBP13.35□□□□□ -0.27
CLPB-201ENST00000294053 ELF1P32519 619 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 KIF5AQ12840 1032 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 C4orf32Q8N8J7 132 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 FERMT2Q96AC1 680 aa13.35□□□□□ -0.27
CLPB-201ENST00000294053 UBA5Q9GZZ9 404 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms