RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ACCSQ96QU6 501 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 PASKQ96RG2 1323 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 TMOD1P28289 359 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 STX2P32856 288 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 POLGP54098 1239 aaPredicted RBP13.99□□□□□ -0.17
PTCD1-201ENST00000292478 YARSP54577 528 aaKnown RBP13.99□□□□□ -0.17
PTCD1-201ENST00000292478 GRAPQ13588 217 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 GEN1Q17RS7 908 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 ANKRD35Q8N283 1001 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 GRAPLQ8TC17 118 aaPredicted RBP13.99□□□□□ -0.17
PTCD1-201ENST00000292478 SPHKAPQ2M3C7 1700 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 CROCC2H7BZ55 1655 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 CDHR2Q9BYE9 1310 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 A0A1B0GUA9 196 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 CCDC160A6NGH7 325 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 NR2F2P24468 414 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 CCNE1P24864 410 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 ADCY8P40145 1251 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 KRT81Q14533 505 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 CDC37Q16543 378 aaPredicted RBP13.99□□□□□ -0.17
PTCD1-201ENST00000292478 CDHR1Q96JP9 859 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 NT5C1BQ96P26 610 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 BCAP29Q9UHQ4 241 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 THAP12O43422 761 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 NSFP46459 744 aaKnown RBP13.98□□□□□ -0.17
PTCD1-201ENST00000292478 FNBP4Q8N3X1 1017 aaPredicted RBP13.98□□□□□ -0.17
PTCD1-201ENST00000292478 PIGBQ92521 554 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 ZNF577Q9BSK1 485 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 PIH1D3Q9NQM4 214 aaKnown RBP13.98□□□□□ -0.17
PTCD1-201ENST00000292478 RBL2Q08999 1139 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 VSTM4Q8IW00 320 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 PPM1KQ8N3J5 372 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 PANX2Q96RD6 677 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 KRT12Q99456 494 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 FAM114A2Q9NRY5 505 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 RNF17Q9BXT8 1623 aaKnown RBP13.98□□□□□ -0.17
PTCD1-201ENST00000292478 PRKAB2O43741 272 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 TMEM191BP0C7N4 346 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 BMP3P12645 472 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 ALCAMQ13740 583 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 ALDH8A1Q9H2A2 487 aaPredicted RBP13.98□□□□□ -0.17
PTCD1-201ENST00000292478 HESX1Q9UBX0 185 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 SETBP1Q9Y6X0 1596 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 CDC42BPBQ9Y5S2 1711 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 GUCY2FP51841 1108 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 ZNF131P52739 623 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 TSNAXIP1Q2TAA8 658 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 ANKRD20A3Q5VUR7 823 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 PPP4R3CPQ6ZMV5 832 aa13.98□□□□□ -0.17
PTCD1-201ENST00000292478 STRBPQ96SI9 672 aaKnown RBP13.98□□□□□ -0.17
PTCD1-201ENST00000292478 MAP7Q14244 749 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 TTC16Q8NEE8 873 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 PIGSQ96S52 555 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 CSRNP1Q96S65 589 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 CD2APQ9Y5K6 639 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 RASGRF1Q13972 1273 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 PRKG1Q13976 671 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 ZNF579Q8NAF0 562 aaKnown RBP13.97□□□□□ -0.17
PTCD1-201ENST00000292478 ZNF408Q9H9D4 720 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 IFT122Q9HBG6 1241 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 PI4KBQ9UBF8 816 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 ZBED6P86452 979 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 CASC4Q6P4E1 433 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 GPIHBP1Q8IV16 184 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 METTL13Q8N6R0 699 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 ZBTB9Q96C00 473 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 SDCCAG8Q86SQ7 713 aaPredicted RBP13.97□□□□□ -0.17
PTCD1-201ENST00000292478 FAM160B2Q86V87 743 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 FAM186BQ8IYM0 893 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 POMGNT1Q8WZA1 660 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 VCX3BQ9H321 246 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 ALKQ9UM73 1620 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 SPATA31A3Q5VYP0 1347 aa13.97□□□□□ -0.17
PTCD1-201ENST00000292478 HSPA6P17066 643 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 GNGT1P63211 74 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 SLC35F6Q8N357 371 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.96□□□□□ -0.17
PTCD1-201ENST00000292478 GJA10Q969M2 543 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 COA1Q9GZY4 146 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 PNMA6FA0A0J9YX94 578 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 ATF2P15336 505 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 LRRC63Q05C16 580 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 FOXP4Q8IVH2 680 aaPredicted RBP13.96□□□□□ -0.17
PTCD1-201ENST00000292478 USP31Q70CQ4 1352 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 LARGE1O95461 756 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 SLC12A2P55011 1212 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 RASSF7Q02833 373 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 CYP4A11Q02928 519 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 MECOMQ03112 1051 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 SYDE2Q5VT97 1194 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 SARM1Q6SZW1 724 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 TRIM50Q86XT4 487 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 PAGE5Q96GU1 130 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 CAPS2Q9BXY5 557 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 ST7Q9NRC1 585 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 PNPLA6Q8IY17 1366 aa13.96□□□□□ -0.17
PTCD1-201ENST00000292478 RNF8O76064 485 aa13.96□□□□□ -0.18
PTCD1-201ENST00000292478 ORC2Q13416 577 aaPredicted RBP13.96□□□□□ -0.18
PTCD1-201ENST00000292478 PAGR1Q9BTK6 254 aa13.96□□□□□ -0.18
PTCD1-201ENST00000292478 KLHL14Q9P2G3 628 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 272 ms