RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 MICU3Q86XE3 530 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 ZSWIM5Q9P217 1185 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 SAMM50Q9Y512 469 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 FLT1P17948 1338 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 N4BP3O15049 544 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 ZBTB43O43298 467 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 ZMYND10O75800 440 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 SAFBQ15424 915 aaKnown RBP eCLIP11.69□□□□□ -0.54
ERCC3-201ENST00000285398 ALX1Q15699 326 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 AKNAD1Q5T1N1 836 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 RSBN1LQ6PCB5 846 aaPredicted RBP11.69□□□□□ -0.54
ERCC3-201ENST00000285398 AENQ8WTP8 325 aaKnown RBP11.69□□□□□ -0.54
ERCC3-201ENST00000285398 JAKMIP2Q96AA8 810 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 RUFY1Q96T51 708 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 MYL10Q9BUA6 226 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 EHD4Q9H223 541 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 FAM217BQ9NTX9 383 aaPredicted RBP11.69□□□□□ -0.54
ERCC3-201ENST00000285398 HDAC6Q9UBN7 1215 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 CCDC88AQ3V6T2 1871 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 TMCO5BA8MYB1 307 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 MYO1FO00160 1098 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 ZEB2O60315 1214 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 ATP1A1P05023 1023 aaKnown RBP11.68□□□□□ -0.54
ERCC3-201ENST00000285398 NF2P35240 595 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 KRT9P35527 623 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 STX17P56962 302 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 PPP4CP60510 307 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 RILPL1Q5EBL4 403 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 TMEM87BQ96K49 555 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 CEP131Q9UPN4 1083 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 GOLGA8AA7E2F4 631 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 MMP1P03956 469 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 MYBL2P10244 700 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 CD44P16070 742 aaKnown RBP11.68□□□□□ -0.54
ERCC3-201ENST00000285398 ELF1P32519 619 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 SPAG1Q07617 926 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 ALS2CLQ60I27 953 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 SGMS1Q86VZ5 419 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 CAPZA3Q96KX2 299 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 RABEP2Q9H5N1 569 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 SRPRBQ9Y5M8 271 aaKnown RBP11.68□□□□□ -0.54
ERCC3-201ENST00000285398 MYH8P13535 1937 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 ZNF541Q9H0D2 1346 aa11.68□□□□□ -0.54
ERCC3-201ENST00000285398 LRRC10BA6NIK2 292 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 BTBD18B2RXH4 712 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 KRT86O43790 486 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 FMNL1O95466 1100 aaPredicted RBP11.67□□□□□ -0.54
ERCC3-201ENST00000285398 VIL1P09327 827 aaKnown RBP11.67□□□□□ -0.54
ERCC3-201ENST00000285398 KRT83P78385 493 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 PLCB4Q15147 1175 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 TSR1Q2NL82 804 aaKnown RBP11.67□□□□□ -0.54
ERCC3-201ENST00000285398 CCDC122Q5T0U0 273 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 GSPT2Q8IYD1 628 aaKnown RBP11.67□□□□□ -0.54
ERCC3-201ENST00000285398 WASF1Q92558 559 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 ZKSCAN4Q969J2 545 aaPredicted RBP11.67□□□□□ -0.54
ERCC3-201ENST00000285398 FAM163AQ96GL9 167 aaPredicted RBP11.67□□□□□ -0.54
ERCC3-201ENST00000285398 PAGR1Q9BTK6 254 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 ATP8A2Q9NTI2 1148 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 ANO9A1A5B4 782 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 UBE2Q2LH0YL09 131 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 SRGAP2O75044 1071 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 CCT6AP40227 531 aaKnown RBP11.67□□□□□ -0.54
ERCC3-201ENST00000285398 SSRP1Q08945 709 aaKnown RBP11.67□□□□□ -0.54
ERCC3-201ENST00000285398 ZNF662Q6ZS27 426 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 SND1Q7KZF4 910 aaKnown RBP eCLIP11.67□□□□□ -0.54
ERCC3-201ENST00000285398 CDAN1Q8IWY9 1227 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 DIS3L2Q8IYB7 885 aaKnown RBP11.67□□□□□ -0.54
ERCC3-201ENST00000285398 IGDCC4Q8TDY8 1250 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 GSDMAQ96QA5 445 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 SLC26A6Q9BXS9 759 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 FOXP1Q9H334 677 aaPredicted RBP11.67□□□□□ -0.54
ERCC3-201ENST00000285398 VEZTQ9HBM0 779 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 LIMA1Q9UHB6 759 aaKnown RBP11.67□□□□□ -0.54
ERCC3-201ENST00000285398 MCM8Q9UJA3 840 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 CDR1P51861 262 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 SMTNP53814 917 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 NBPF9Q3BBW0 867 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 PREPLQ4J6C6 727 aaPredicted RBP11.67□□□□□ -0.54
ERCC3-201ENST00000285398 CIAPIN1Q6FI81 312 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 SLF2Q8IX21 1173 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 LY9Q9HBG7 655 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 TRIM10Q9UDY6 481 aa11.67□□□□□ -0.54
ERCC3-201ENST00000285398 ASTN2O75129 1339 aaPredicted RBP11.66□□□□□ -0.54
ERCC3-201ENST00000285398 TCP10L2B9ZVM9 353 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 HSF2BPO75031 334 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 CALRP27797 417 aaKnown RBP11.66□□□□□ -0.54
ERCC3-201ENST00000285398 KRT31Q15323 416 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 HHIPL2Q6UWX4 724 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.66□□□□□ -0.54
ERCC3-201ENST00000285398 SAMD7Q7Z3H4 446 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 SH3RF1Q7Z6J0 888 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 OGFOD1Q8N543 542 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 CEP120Q8N960 986 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 MIEF2Q96C03 454 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 GMLQ99445 158 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 KLC4Q9NSK0 619 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 MTMR7Q9Y216 660 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 REXO2Q9Y3B8 237 aaKnown RBP11.66□□□□□ -0.54
ERCC3-201ENST00000285398 PCDHB6Q9Y5E3 794 aa11.66□□□□□ -0.54
ERCC3-201ENST00000285398 NID2Q14112 1375 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms