RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 RPTORQ8N122 1335 aa24.89■■□□□ 1.57
PDLIM3-203ENST00000284771 COBLO75128 1261 aa24.88■■□□□ 1.57
PDLIM3-203ENST00000284771 ADORA2AP29274 412 aa24.88■■□□□ 1.57
PDLIM3-203ENST00000284771 LACTBP83111 547 aaPredicted RBP24.88■■□□□ 1.57
PDLIM3-203ENST00000284771 MAP2K1Q02750 393 aaPredicted RBP24.88■■□□□ 1.57
PDLIM3-203ENST00000284771 DNM1Q05193 864 aaKnown RBP24.88■■□□□ 1.57
PDLIM3-203ENST00000284771 GRB14Q14449 540 aa24.88■■□□□ 1.57
PDLIM3-203ENST00000284771 ABRAQ8N0Z2 381 aa24.88■■□□□ 1.57
PDLIM3-203ENST00000284771 RMDN3Q96TC7 470 aa24.88■■□□□ 1.57
PDLIM3-203ENST00000284771 SAGE1Q9NXZ1 904 aa24.88■■□□□ 1.57
PDLIM3-203ENST00000284771 MGAMO43451 1857 aa24.88■■□□□ 1.57
PDLIM3-203ENST00000284771 SOWAHBA6NEL2 793 aa24.88■■□□□ 1.57
PDLIM3-203ENST00000284771 ATP2B1P20020 1258 aa24.88■■□□□ 1.57
PDLIM3-203ENST00000284771 SREBF1P36956 1147 aa24.88■■□□□ 1.57
PDLIM3-203ENST00000284771 MCTP2Q6DN12 878 aa24.88■■□□□ 1.57
PDLIM3-203ENST00000284771 IL31RAQ8NI17 732 aa24.88■■□□□ 1.57
PDLIM3-203ENST00000284771 SP3Q02447 781 aa24.87■■□□□ 1.57
PDLIM3-203ENST00000284771 PXMP2Q9NR77 195 aa24.87■■□□□ 1.57
PDLIM3-203ENST00000284771 WBP1LQ9NX94 342 aa24.87■■□□□ 1.57
PDLIM3-203ENST00000284771 TFIP11Q9UBB9 837 aaKnown RBP24.87■■□□□ 1.57
PDLIM3-203ENST00000284771 PCDHB6Q9Y5E3 794 aa24.87■■□□□ 1.57
PDLIM3-203ENST00000284771 IVNS1ABPQ9Y6Y0 642 aa24.87■■□□□ 1.57
PDLIM3-203ENST00000284771 FRMPD4Q14CM0 1322 aa24.87■■□□□ 1.57
PDLIM3-203ENST00000284771 POTEB2H3BUK9 544 aa24.86■■□□□ 1.57
PDLIM3-203ENST00000284771 GPR25O00155 361 aa24.86■■□□□ 1.57
PDLIM3-203ENST00000284771 EIF2AK2P19525 551 aaKnown RBP24.86■■□□□ 1.57
PDLIM3-203ENST00000284771 ARHGAP4P98171 946 aa24.86■■□□□ 1.57
PDLIM3-203ENST00000284771 RILPL1Q5EBL4 403 aa24.86■■□□□ 1.57
PDLIM3-203ENST00000284771 MORN1Q5T089 497 aa24.86■■□□□ 1.57
PDLIM3-203ENST00000284771 ZFP91Q96JP5 570 aaPredicted RBP24.86■■□□□ 1.57
PDLIM3-203ENST00000284771 USP28Q96RU2 1077 aa24.86■■□□□ 1.57
PDLIM3-203ENST00000284771 PDCD2LQ9BRP1 358 aa24.86■■□□□ 1.57
PDLIM3-203ENST00000284771 TSKSQ9UJT2 592 aa24.86■■□□□ 1.57
PDLIM3-203ENST00000284771 GJD2Q9UKL4 321 aa24.86■■□□□ 1.57
PDLIM3-203ENST00000284771 PGM5Q15124 567 aa24.85■■□□□ 1.57
PDLIM3-203ENST00000284771 NEK8Q86SG6 692 aa24.85■■□□□ 1.57
PDLIM3-203ENST00000284771 TRIM47Q96LD4 638 aa24.85■■□□□ 1.57
PDLIM3-203ENST00000284771 PSMC4P43686 418 aa24.85■■□□□ 1.57
PDLIM3-203ENST00000284771 LETM2Q2VYF4 491 aa24.85■■□□□ 1.57
PDLIM3-203ENST00000284771 ZNF792Q3KQV3 632 aa24.85■■□□□ 1.57
PDLIM3-203ENST00000284771 ARHGEF16Q5VV41 709 aa24.85■■□□□ 1.57
PDLIM3-203ENST00000284771 NSUN6Q8TEA1 469 aaKnown RBP24.85■■□□□ 1.57
PDLIM3-203ENST00000284771 ATP6V1DQ9Y5K8 247 aa24.85■■□□□ 1.57
PDLIM3-203ENST00000284771 CLIC4Q9Y696 253 aa24.85■■□□□ 1.57
PDLIM3-203ENST00000284771 SLC15A5A6NIM6 579 aa24.84■■□□□ 1.57
PDLIM3-203ENST00000284771 TRAPPC10P48553 1259 aa24.84■■□□□ 1.57
PDLIM3-203ENST00000284771 USP11P51784 963 aa24.84■■□□□ 1.57
PDLIM3-203ENST00000284771 MRPS9P82933 396 aaKnown RBP24.84■■□□□ 1.57
PDLIM3-203ENST00000284771 DNERQ8NFT8 737 aa24.84■■□□□ 1.57
PDLIM3-203ENST00000284771 CYP2W1Q8TAV3 490 aa24.84■■□□□ 1.57
PDLIM3-203ENST00000284771 USP6NLQ92738 828 aa24.84■■□□□ 1.57
PDLIM3-203ENST00000284771 PLXNA1Q9UIW2 1896 aa24.84■■□□□ 1.57
PDLIM3-203ENST00000284771 TNPO2O14787 897 aaKnown RBP24.83■■□□□ 1.57
PDLIM3-203ENST00000284771 TDP2O95551 362 aa24.83■■□□□ 1.57
PDLIM3-203ENST00000284771 CYP3A4P08684 503 aa24.83■■□□□ 1.57
PDLIM3-203ENST00000284771 ALDH5A1P51649 535 aaPredicted RBP24.83■■□□□ 1.57
PDLIM3-203ENST00000284771 CEBPZQ03701 1054 aaKnown RBP24.83■■□□□ 1.57
PDLIM3-203ENST00000284771 ZNF174Q15697 407 aa24.83■■□□□ 1.57
PDLIM3-203ENST00000284771 TTC38Q5R3I4 469 aa24.83■■□□□ 1.57
PDLIM3-203ENST00000284771 FAM86B1E9PN63 330 aa24.82■■□□□ 1.56
PDLIM3-203ENST00000284771 NR3C2P08235 984 aa24.82■■□□□ 1.56
PDLIM3-203ENST00000284771 FAM86B2P0C5J1 330 aa24.82■■□□□ 1.56
PDLIM3-203ENST00000284771 VSIG10LQ86VR7 867 aa24.82■■□□□ 1.56
PDLIM3-203ENST00000284771 NPLOC4Q8TAT6 608 aa24.82■■□□□ 1.56
PDLIM3-203ENST00000284771 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.82■■□□□ 1.56
PDLIM3-203ENST00000284771 NOL7Q9UMY1 257 aaKnown RBP24.82■■□□□ 1.56
PDLIM3-203ENST00000284771 ZNF236Q9UL36 1845 aa24.82■■□□□ 1.56
PDLIM3-203ENST00000284771 CCNT1O60563 726 aaKnown RBP24.81■■□□□ 1.56
PDLIM3-203ENST00000284771 SF3A1Q15459 793 aaKnown RBP24.81■■□□□ 1.56
PDLIM3-203ENST00000284771 PCNX4Q63HM2 1172 aa24.81■■□□□ 1.56
PDLIM3-203ENST00000284771 ZNF296Q8WUU4 475 aaPredicted RBP24.81■■□□□ 1.56
PDLIM3-203ENST00000284771 CNPY2Q9Y2B0 182 aa24.81■■□□□ 1.56
PDLIM3-203ENST00000284771 EDNRBP24530 442 aa24.81■■□□□ 1.56
PDLIM3-203ENST00000284771 CIITAP33076 1130 aa24.81■■□□□ 1.56
PDLIM3-203ENST00000284771 MCM7P33993 719 aa24.81■■□□□ 1.56
PDLIM3-203ENST00000284771 FCGRTP55899 365 aa24.81■■□□□ 1.56
PDLIM3-203ENST00000284771 PPP4R3AQ6IN85 833 aa24.81■■□□□ 1.56
PDLIM3-203ENST00000284771 CLEC17AQ6ZS10 378 aa24.81■■□□□ 1.56
PDLIM3-203ENST00000284771 DPP9Q86TI2 863 aa24.81■■□□□ 1.56
PDLIM3-203ENST00000284771 BEGAINQ9BUH8 593 aa24.81■■□□□ 1.56
PDLIM3-203ENST00000284771 ADD3Q9UEY8 706 aaKnown RBP24.81■■□□□ 1.56
PDLIM3-203ENST00000284771 MRVI1Q9Y6F6 885 aa24.81■■□□□ 1.56
PDLIM3-203ENST00000284771 MCM3APO60318 1980 aa24.8■■□□□ 1.56
PDLIM3-203ENST00000284771 CENPFP49454 3210 aa24.8■■□□□ 1.56
PDLIM3-203ENST00000284771 CYP3A7-CYP3A51PA0A087WV96 503 aa24.8■■□□□ 1.56
PDLIM3-203ENST00000284771 SLC37A4O43826 429 aa24.8■■□□□ 1.56
PDLIM3-203ENST00000284771 BAG4O95429 457 aaKnown RBP24.8■■□□□ 1.56
PDLIM3-203ENST00000284771 CYP3A7P24462 503 aa24.8■■□□□ 1.56
PDLIM3-203ENST00000284771 MAP2K5Q13163 448 aa24.8■■□□□ 1.56
PDLIM3-203ENST00000284771 PTPAQ15257 358 aa24.8■■□□□ 1.56
PDLIM3-203ENST00000284771 ANO1Q5XXA6 986 aa24.8■■□□□ 1.56
PDLIM3-203ENST00000284771 C4orf32Q8N8J7 132 aa24.8■■□□□ 1.56
PDLIM3-203ENST00000284771 CD99L2Q8TCZ2 262 aa24.8■■□□□ 1.56
PDLIM3-203ENST00000284771 LENG9Q96B70 501 aa24.8■■□□□ 1.56
PDLIM3-203ENST00000284771 MBOAT7Q96N66 472 aa24.8■■□□□ 1.56
PDLIM3-203ENST00000284771 ZNF396Q96N95 335 aaPredicted RBP24.8■■□□□ 1.56
PDLIM3-203ENST00000284771 EHMT1Q9H9B1 1298 aa24.8■■□□□ 1.56
PDLIM3-203ENST00000284771 POLR3EQ9NVU0 708 aa24.8■■□□□ 1.56
PDLIM3-203ENST00000284771 RTEL1Q9NZ71 1219 aa24.8■■□□□ 1.56
PDLIM3-203ENST00000284771 IGLV3-22A0A075B6J6 115 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms