RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 E2F4Q16254 413 aa20.5■□□□□ 0.87
PDLIM3-201ENST00000284767 UBE2SQ16763 222 aa20.5■□□□□ 0.87
PDLIM3-201ENST00000284767 REXO1Q8N1G1 1221 aaKnown RBP20.5■□□□□ 0.87
PDLIM3-201ENST00000284767 GH2P01242 217 aa20.49■□□□□ 0.87
PDLIM3-201ENST00000284767 TUBBP07437 444 aa20.49■□□□□ 0.87
PDLIM3-201ENST00000284767 VIL1P09327 827 aaKnown RBP20.49■□□□□ 0.87
PDLIM3-201ENST00000284767 SNAP25P60880 206 aa20.49■□□□□ 0.87
PDLIM3-201ENST00000284767 ABCB5Q2M3G0 1257 aa20.49■□□□□ 0.87
PDLIM3-201ENST00000284767 ZNF569Q5MCW4 686 aa20.49■□□□□ 0.87
PDLIM3-201ENST00000284767 SMYD4Q8IYR2 804 aaPredicted RBP20.49■□□□□ 0.87
PDLIM3-201ENST00000284767 GSDMAQ96QA5 445 aa20.49■□□□□ 0.87
PDLIM3-201ENST00000284767 ZSWIM4Q9H7M6 989 aa20.49■□□□□ 0.87
PDLIM3-201ENST00000284767 PUF60Q9UHX1 559 aaKnown RBP20.49■□□□□ 0.87
PDLIM3-201ENST00000284767 KIF4BQ2VIQ3 1234 aa20.49■□□□□ 0.87
PDLIM3-201ENST00000284767 IQUBQ8NA54 791 aa20.49■□□□□ 0.87
PDLIM3-201ENST00000284767 SLC16A10Q8TF71 515 aa20.49■□□□□ 0.87
PDLIM3-201ENST00000284767 KANSL2Q9H9L4 492 aa20.49■□□□□ 0.87
PDLIM3-201ENST00000284767 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.49■□□□□ 0.87
PDLIM3-201ENST00000284767 MYO1AQ9UBC5 1043 aa20.49■□□□□ 0.87
PDLIM3-201ENST00000284767 SLC1A4P43007 532 aa20.48■□□□□ 0.87
PDLIM3-201ENST00000284767 ARL6IP4Q66PJ3 421 aaKnown RBP20.48■□□□□ 0.87
PDLIM3-201ENST00000284767 SLFN13Q68D06 897 aa20.48■□□□□ 0.87
PDLIM3-201ENST00000284767 DTHD1Q6ZMT9 781 aa20.48■□□□□ 0.87
PDLIM3-201ENST00000284767 KRT25Q7Z3Z0 450 aa20.48■□□□□ 0.87
PDLIM3-201ENST00000284767 VEZTQ9HBM0 779 aa20.48■□□□□ 0.87
PDLIM3-201ENST00000284767 FEZ2Q9UHY8 353 aaPredicted RBP20.48■□□□□ 0.87
PDLIM3-201ENST00000284767 ENTPD3O75355 529 aa20.48■□□□□ 0.87
PDLIM3-201ENST00000284767 DLGAP5Q15398 846 aa20.48■□□□□ 0.87
PDLIM3-201ENST00000284767 WHAMMP3Q1A5X7 153 aa20.48■□□□□ 0.87
PDLIM3-201ENST00000284767 TMTC1Q8IUR5 882 aa20.48■□□□□ 0.87
PDLIM3-201ENST00000284767 GBP3Q9H0R5 595 aa20.48■□□□□ 0.87
PDLIM3-201ENST00000284767 ZNF70Q9UC06 446 aaPredicted RBP20.48■□□□□ 0.87
PDLIM3-201ENST00000284767 PNMA6FA0A0J9YX94 578 aa20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 EDIL3O43854 480 aa20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 NPM3O75607 178 aaKnown RBP20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 CD44P16070 742 aaKnown RBP20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 TAL1P17542 331 aaPredicted RBP20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 CASP14P31944 242 aa20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 LMAN1P49257 510 aa20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 PDXDC2PQ6P474 469 aa20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 NEK8Q86SG6 692 aa20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 CPLX3Q8WVH0 158 aa20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 L1RE1Q9UN81 338 aa20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 ATRNL1Q5VV63 1379 aa20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 ADCY7P51828 1080 aa20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 DPYDQ12882 1025 aa20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 GPATCH4Q5T3I0 446 aaKnown RBP20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 KLHL10Q6JEL2 608 aa20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 OGFOD1Q8N543 542 aa20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 PNKPQ96T60 521 aa20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 PDE11AQ9HCR9 933 aa20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 PIM2Q9P1W9 311 aa20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 NYAP2Q9P242 653 aa20.47■□□□□ 0.87
PDLIM3-201ENST00000284767 PSME4Q14997 1843 aa20.46■□□□□ 0.87
PDLIM3-201ENST00000284767 GYPCP04921 128 aa20.46■□□□□ 0.87
PDLIM3-201ENST00000284767 ACTN2P35609 894 aa20.46■□□□□ 0.87
PDLIM3-201ENST00000284767 LONP1P36776 959 aaKnown RBP20.46■□□□□ 0.87
PDLIM3-201ENST00000284767 CXCL9Q07325 125 aa20.46■□□□□ 0.87
PDLIM3-201ENST00000284767 TMEM179Q6ZVK1 233 aa20.46■□□□□ 0.87
PDLIM3-201ENST00000284767 POTEDQ86YR6 584 aa20.46■□□□□ 0.87
PDLIM3-201ENST00000284767 SPICE1Q8N0Z3 855 aa20.46■□□□□ 0.87
PDLIM3-201ENST00000284767 LRRC15Q8TF66 581 aa20.46■□□□□ 0.87
PDLIM3-201ENST00000284767 NAPGQ99747 312 aaPredicted RBP20.46■□□□□ 0.87
PDLIM3-201ENST00000284767 A0A1W2PRG0 241 aa20.46■□□□□ 0.87
PDLIM3-201ENST00000284767 PPP1R3GB7ZBB8 358 aa20.46■□□□□ 0.87
PDLIM3-201ENST00000284767 F5H6K3 240 aa20.46■□□□□ 0.87
PDLIM3-201ENST00000284767 ZBTB5O15062 677 aa20.46■□□□□ 0.87
PDLIM3-201ENST00000284767 COBLO75128 1261 aa20.46■□□□□ 0.87
PDLIM3-201ENST00000284767 KLRC3Q07444 240 aa20.46■□□□□ 0.87
PDLIM3-201ENST00000284767 NIM1KQ8IY84 436 aa20.46■□□□□ 0.87
PDLIM3-201ENST00000284767 MKL1Q969V6 931 aa20.46■□□□□ 0.87
PDLIM3-201ENST00000284767 TMEM39BQ9GZU3 492 aa20.46■□□□□ 0.87
PDLIM3-201ENST00000284767 ZNRF3Q9ULT6 936 aa20.46■□□□□ 0.87
PDLIM3-201ENST00000284767 A0A0U1RQJ8 604 aa20.45■□□□□ 0.86
PDLIM3-201ENST00000284767 ESYT2A0FGR8 921 aa20.45■□□□□ 0.86
PDLIM3-201ENST00000284767 GYS2P54840 703 aa20.45■□□□□ 0.86
PDLIM3-201ENST00000284767 STX17P56962 302 aa20.45■□□□□ 0.86
PDLIM3-201ENST00000284767 MCM6Q14566 821 aa20.45■□□□□ 0.86
PDLIM3-201ENST00000284767 SLC35F6Q8N357 371 aa20.45■□□□□ 0.86
PDLIM3-201ENST00000284767 ATRIPQ8WXE1 791 aa20.45■□□□□ 0.86
PDLIM3-201ENST00000284767 TRERF1Q96PN7 1200 aa20.45■□□□□ 0.86
PDLIM3-201ENST00000284767 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.45■□□□□ 0.86
PDLIM3-201ENST00000284767 TMOD2Q9NZR1 351 aa20.45■□□□□ 0.86
PDLIM3-201ENST00000284767 CTAGE15A4D2H0 777 aa20.45■□□□□ 0.86
PDLIM3-201ENST00000284767 TDP2O95551 362 aa20.45■□□□□ 0.86
PDLIM3-201ENST00000284767 CTAGE8P0CG41 777 aa20.45■□□□□ 0.86
PDLIM3-201ENST00000284767 TNNI2P48788 182 aa20.45■□□□□ 0.86
PDLIM3-201ENST00000284767 TRIM14Q14142 442 aa20.45■□□□□ 0.86
PDLIM3-201ENST00000284767 QRICH1Q2TAL8 776 aa20.45■□□□□ 0.86
PDLIM3-201ENST00000284767 MIGA2Q7L4E1 593 aa20.45■□□□□ 0.86
PDLIM3-201ENST00000284767 CTAGE6Q86UF2 777 aa20.45■□□□□ 0.86
PDLIM3-201ENST00000284767 CTAGE4Q8IX94 777 aa20.45■□□□□ 0.86
PDLIM3-201ENST00000284767 CNTNAP1P78357 1384 aa20.45■□□□□ 0.86
PDLIM3-201ENST00000284767 ECE1P42892 770 aa20.44■□□□□ 0.86
PDLIM3-201ENST00000284767 NAALADL2Q58DX5 795 aa20.44■□□□□ 0.86
PDLIM3-201ENST00000284767 RBM26Q5T8P6 1007 aaKnown RBP20.44■□□□□ 0.86
PDLIM3-201ENST00000284767 RASSF8Q8NHQ8 419 aa20.44■□□□□ 0.86
PDLIM3-201ENST00000284767 UIMC1Q96RL1 719 aa20.44■□□□□ 0.86
PDLIM3-201ENST00000284767 ABCB6Q9NP58 842 aa20.44■□□□□ 0.86
PDLIM3-201ENST00000284767 VPS18Q9P253 973 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms