RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 SRGAP2CP0DJJ0 459 aa14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 RECQLP46063 649 aaPredicted RBP14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 PPP6R3Q5H9R7 873 aaPredicted RBP14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 FAM178BQ8IXR5 827 aa14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 NIM1KQ8IY84 436 aa14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 KIAA2013Q8IYS2 634 aa14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 CCDC51Q96ER9 411 aa14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 METTL14Q9HCE5 456 aaKnown RBP14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 STK32BQ9NY57 414 aa14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 FBXO2Q9UK22 296 aaPredicted RBP14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 ANXA13P27216 316 aa14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 FAM160B1Q5W0V3 765 aa14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 OTUD7BQ6GQQ9 843 aa14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 ARMCX3Q9UH62 379 aaPredicted RBP14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 TRAPPC10P48553 1259 aa14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 OSBPL10Q9BXB5 764 aa14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 MYO1FO00160 1098 aa14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 TAC1P20366 129 aa14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 ARMCX5Q6P1M9 558 aa14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 GADL1Q6ZQY3 521 aa14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 FASTKD5Q7L8L6 764 aaKnown RBP14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 MYOCDQ8IZQ8 938 aa14.31□□□□□ -0.12
SMARCA5-201ENST00000283131 PSMA3P25788 255 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 ATG3Q9NT62 314 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 BNIP3LO60238 219 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 TFDP1Q14186 410 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 CEP85Q6P2H3 762 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 MBIPQ9NS73 344 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 MSH6P52701 1360 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 DDX5P17844 614 aaKnown RBP14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 PPP2R5BQ15173 497 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 SLFN12Q8IYM2 578 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 RAPGEF5Q92565 580 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 SRPK1Q96SB4 655 aaKnown RBP14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 KLC2Q9H0B6 622 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 SLITRK6Q9H5Y7 841 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 DDX28Q9NUL7 540 aaKnown RBP14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 GAPVD1Q14C86 1478 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 WDR7Q9Y4E6 1490 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 HSPA1AP0DMV8 641 aaKnown RBP14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 HSPA1BP0DMV9 641 aaKnown RBP14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 IFNAR2P48551 515 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 DONSONQ9NYP3 566 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 NBNO60934 754 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 CIITAP33076 1130 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 TNFAIP1Q13829 316 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 DPP8Q6V1X1 898 aaPredicted RBP14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 TCP11Q8WWU5 503 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 CCDC90BQ9GZT6 254 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 OR8K1Q8NGG5 319 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 STRIP2Q9ULQ0 834 aa14.3□□□□□ -0.12
SMARCA5-201ENST00000283131 ZNF18P17022 549 aa14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 APBA1Q02410 837 aa14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 TRIM11Q96F44 468 aa14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 VGLL3A8MV65 326 aa14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 SNX2O60749 519 aa14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 TCP1P17987 556 aaKnown RBP14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 C20orf194Q5TEA3 1177 aa14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 DPY19L2Q6NUT2 758 aa14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 MEIS3Q99687 375 aa14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 BUB1O43683 1085 aa14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 NBPF20Q3BBV1 942 aa14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 NBPF10Q6P3W6 841 aaKnown RBP14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 IBTKQ9P2D0 1353 aaPredicted RBP14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 SCG3Q8WXD2 468 aaKnown RBP14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 AATFQ9NY61 560 aaKnown RBP eCLIP14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 MKL2Q9ULH7 1088 aa14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 GOLGA8RI6L899 631 aa14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 IGBP1P78318 339 aa14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 GJC2Q5T442 439 aaPredicted RBP14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 NLRP9Q7RTR0 991 aa14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 HDDC2Q7Z4H3 204 aa14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 AKT3Q9Y243 479 aa14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 ZSCAN20P17040 1043 aaPredicted RBP14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 TFCP2Q12800 502 aa14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 MAGOHBQ96A72 148 aaKnown RBP14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 LRRC4Q9HBW1 653 aa14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 DBNLQ9UJU6 430 aaKnown RBP14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 INTUQ9ULD6 942 aa14.29□□□□□ -0.12
SMARCA5-201ENST00000283131 CCDC78A2IDD5 438 aa14.28□□□□□ -0.12
SMARCA5-201ENST00000283131 IFT88Q13099 833 aa14.28□□□□□ -0.12
SMARCA5-201ENST00000283131 TCP11X2Q5H9J9 407 aa14.28□□□□□ -0.12
SMARCA5-201ENST00000283131 CACTINQ8WUQ7 758 aaKnown RBP14.28□□□□□ -0.12
SMARCA5-201ENST00000283131 ZFP42Q96MM3 310 aa14.28□□□□□ -0.12
SMARCA5-201ENST00000283131 EFCAB8A8MWE9 144 aa14.28□□□□□ -0.12
SMARCA5-201ENST00000283131 UBAP1LF5GYI3 381 aa14.28□□□□□ -0.12
SMARCA5-201ENST00000283131 NEMP1O14524 444 aa14.28□□□□□ -0.12
SMARCA5-201ENST00000283131 GNPATO15228 680 aa14.28□□□□□ -0.12
SMARCA5-201ENST00000283131 MT-ND3P03897 115 aa14.28□□□□□ -0.12
SMARCA5-201ENST00000283131 ATP8B2P98198 1209 aa14.28□□□□□ -0.12
SMARCA5-201ENST00000283131 SNX21Q969T3 373 aa14.28□□□□□ -0.12
SMARCA5-201ENST00000283131 VPS39Q96JC1 886 aa14.28□□□□□ -0.12
SMARCA5-201ENST00000283131 AP5M1Q9H0R1 490 aa14.28□□□□□ -0.12
SMARCA5-201ENST00000283131 NRBP2Q9NSY0 501 aa14.28□□□□□ -0.12
SMARCA5-201ENST00000283131 PANK4Q9NVE7 773 aa14.28□□□□□ -0.12
SMARCA5-201ENST00000283131 TTC23LQ6PF05 361 aa14.28□□□□□ -0.12
SMARCA5-201ENST00000283131 ERICH3Q5RHP9 1530 aa14.28□□□□□ -0.12
SMARCA5-201ENST00000283131 IPO5O00410 1097 aaKnown RBP14.28□□□□□ -0.12
SMARCA5-201ENST00000283131 DLGAP5Q15398 846 aa14.28□□□□□ -0.12
SMARCA5-201ENST00000283131 PTPROQ16827 1216 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms