RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 TDP2O95551 362 aa23.66■■□□□ 1.38
YBX3-202ENST00000279550 FANCCQ00597 558 aa23.66■■□□□ 1.38
YBX3-202ENST00000279550 NAALADL2Q58DX5 795 aa23.66■■□□□ 1.38
YBX3-202ENST00000279550 LDLRAD1Q5T700 205 aa23.66■■□□□ 1.38
YBX3-202ENST00000279550 ERO1BQ86YB8 467 aa23.66■■□□□ 1.38
YBX3-202ENST00000279550 KIFC2Q96AC6 838 aa23.66■■□□□ 1.38
YBX3-202ENST00000279550 PYM1Q9BRP8 204 aaKnown RBP23.66■■□□□ 1.38
YBX3-202ENST00000279550 DISC1Q9NRI5 854 aa23.66■■□□□ 1.38
YBX3-202ENST00000279550 FANCLQ9NW38 375 aa23.66■■□□□ 1.38
YBX3-202ENST00000279550 GTPBP6O43824 516 aaPredicted RBP23.65■■□□□ 1.38
YBX3-202ENST00000279550 CD44P16070 742 aaKnown RBP23.65■■□□□ 1.38
YBX3-202ENST00000279550 TXLNAP40222 546 aa23.65■■□□□ 1.38
YBX3-202ENST00000279550 PPATQ06203 517 aa23.65■■□□□ 1.38
YBX3-202ENST00000279550 CUL4BQ13620 913 aa23.65■■□□□ 1.38
YBX3-202ENST00000279550 ARID5BQ14865 1188 aa23.65■■□□□ 1.38
YBX3-202ENST00000279550 TRMT44Q8IYL2 757 aaKnown RBP23.65■■□□□ 1.38
YBX3-202ENST00000279550 CUL5Q93034 780 aa23.65■■□□□ 1.38
YBX3-202ENST00000279550 CCSER1Q9C0I3 900 aa23.65■■□□□ 1.38
YBX3-202ENST00000279550 RPAP3Q9H6T3 665 aaPredicted RBP23.65■■□□□ 1.38
YBX3-202ENST00000279550 SPDYE5A6NIY4 337 aa23.64■■□□□ 1.38
YBX3-202ENST00000279550 SLC37A4O43826 429 aa23.64■■□□□ 1.38
YBX3-202ENST00000279550 STAT6P42226 847 aa23.64■■□□□ 1.38
YBX3-202ENST00000279550 ORC2Q13416 577 aaPredicted RBP23.64■■□□□ 1.38
YBX3-202ENST00000279550 TANGO6Q9C0B7 1094 aa23.64■■□□□ 1.38
YBX3-202ENST00000279550 SH3D19Q5HYK7 790 aa23.64■■□□□ 1.37
YBX3-202ENST00000279550 CACTINQ8WUQ7 758 aaKnown RBP23.64■■□□□ 1.37
YBX3-202ENST00000279550 OTUD5Q96G74 571 aa23.64■■□□□ 1.37
YBX3-202ENST00000279550 GSDMAQ96QA5 445 aa23.64■■□□□ 1.37
YBX3-202ENST00000279550 MTMR9Q96QG7 549 aa23.64■■□□□ 1.37
YBX3-202ENST00000279550 PLIN2Q99541 437 aa23.64■■□□□ 1.37
YBX3-202ENST00000279550 PSTPIP2Q9H939 334 aa23.64■■□□□ 1.37
YBX3-202ENST00000279550 TMOD4Q9NZQ9 345 aa23.64■■□□□ 1.37
YBX3-202ENST00000279550 DACH1Q9UI36 760 aa23.64■■□□□ 1.37
YBX3-202ENST00000279550 UNCXA6NJT0 531 aa23.63■■□□□ 1.37
YBX3-202ENST00000279550 TAL1P17542 331 aaPredicted RBP23.63■■□□□ 1.37
YBX3-202ENST00000279550 UBA7P41226 1012 aa23.63■■□□□ 1.37
YBX3-202ENST00000279550 MRPL12P52815 198 aaKnown RBP23.63■■□□□ 1.37
YBX3-202ENST00000279550 FKBP1BP68106 108 aa23.63■■□□□ 1.37
YBX3-202ENST00000279550 PRPF38AQ8NAV1 312 aaKnown RBP23.63■■□□□ 1.37
YBX3-202ENST00000279550 SLF1Q9BQI6 1058 aa23.63■■□□□ 1.37
YBX3-202ENST00000279550 AMNQ9BXJ7 453 aa23.63■■□□□ 1.37
YBX3-202ENST00000279550 RANBP17Q9H2T7 1088 aaKnown RBP23.63■■□□□ 1.37
YBX3-202ENST00000279550 PCDHA1Q9Y5I3 950 aa23.63■■□□□ 1.37
YBX3-202ENST00000279550 IRF6O14896 467 aa23.62■■□□□ 1.37
YBX3-202ENST00000279550 OFD1O75665 1012 aa23.62■■□□□ 1.37
YBX3-202ENST00000279550 RRAGBQ5VZM2 374 aa23.62■■□□□ 1.37
YBX3-202ENST00000279550 CHADLQ6NUI6 762 aa23.62■■□□□ 1.37
YBX3-202ENST00000279550 SAMD1Q6SPF0 538 aaPredicted RBP23.62■■□□□ 1.37
YBX3-202ENST00000279550 CABP7Q86V35 215 aa23.62■■□□□ 1.37
YBX3-202ENST00000279550 FBXO11Q86XK2 927 aa23.62■■□□□ 1.37
YBX3-202ENST00000279550 SMYD4Q8IYR2 804 aaPredicted RBP23.62■■□□□ 1.37
YBX3-202ENST00000279550 ENOX1Q8TC92 643 aaKnown RBP23.62■■□□□ 1.37
YBX3-202ENST00000279550 KIAA1524Q8TCG1 905 aa23.62■■□□□ 1.37
YBX3-202ENST00000279550 USP17L15C9J2P7 530 aa23.62■■□□□ 1.37
YBX3-202ENST00000279550 USP17L13C9JLJ4 530 aa23.62■■□□□ 1.37
YBX3-202ENST00000279550 USP17L11C9JVI0 530 aa23.62■■□□□ 1.37
YBX3-202ENST00000279550 USP17L18D6R9N7 530 aa23.62■■□□□ 1.37
YBX3-202ENST00000279550 USP17L22D6RA61 530 aa23.62■■□□□ 1.37
YBX3-202ENST00000279550 USP17L17D6RBQ6 530 aa23.62■■□□□ 1.37
YBX3-202ENST00000279550 USP17L19D6RCP7 530 aa23.62■■□□□ 1.37
YBX3-202ENST00000279550 USP17L20D6RJB6 530 aa23.62■■□□□ 1.37
YBX3-202ENST00000279550 FLOT1O75955 427 aa23.62■■□□□ 1.37
YBX3-202ENST00000279550 CELF2O95319 508 aaKnown RBP23.62■■□□□ 1.37
YBX3-202ENST00000279550 TECP42680 631 aa23.62■■□□□ 1.37
YBX3-202ENST00000279550 USP17L24Q0WX57 530 aa23.62■■□□□ 1.37
YBX3-202ENST00000279550 USP17L6PQ6QN14 398 aa23.62■■□□□ 1.37
YBX3-202ENST00000279550 OPTNQ96CV9 577 aa23.62■■□□□ 1.37
YBX3-202ENST00000279550 MMTAG2Q9BU76 263 aaKnown RBP23.62■■□□□ 1.37
YBX3-202ENST00000279550 GBA2Q9HCG7 927 aaPredicted RBP23.62■■□□□ 1.37
YBX3-202ENST00000279550 PPP1R3GB7ZBB8 358 aa23.61■■□□□ 1.37
YBX3-202ENST00000279550 ITGBL1O95965 494 aaPredicted RBP23.61■■□□□ 1.37
YBX3-202ENST00000279550 CALCRLQ16602 461 aa23.61■■□□□ 1.37
YBX3-202ENST00000279550 FILIP1Q7Z7B0 1213 aa23.61■■□□□ 1.37
YBX3-202ENST00000279550 AK8Q96MA6 479 aa23.61■■□□□ 1.37
YBX3-202ENST00000279550 MYH7BA7E2Y1 1941 aa23.6■■□□□ 1.37
YBX3-202ENST00000279550 ERCC5P28715 1186 aaPredicted RBP23.6■■□□□ 1.37
YBX3-202ENST00000279550 TXKP42681 527 aa23.6■■□□□ 1.37
YBX3-202ENST00000279550 PPIL2Q13356 520 aa23.6■■□□□ 1.37
YBX3-202ENST00000279550 HSP90AA4PQ58FG1 418 aa23.6■■□□□ 1.37
YBX3-202ENST00000279550 IGSF22Q8N9C0 903 aa23.6■■□□□ 1.37
YBX3-202ENST00000279550 RASSF8Q8NHQ8 419 aa23.6■■□□□ 1.37
YBX3-202ENST00000279550 PPP1R9AQ9ULJ8 1098 aa23.6■■□□□ 1.37
YBX3-202ENST00000279550 NFE2L3Q9Y4A8 694 aa23.6■■□□□ 1.37
YBX3-202ENST00000279550 ZNF18P17022 549 aa23.59■■□□□ 1.37
YBX3-202ENST00000279550 PLCG1P19174 1290 aa23.59■■□□□ 1.37
YBX3-202ENST00000279550 NOLC1Q14978 699 aaKnown RBP eCLIP23.59■■□□□ 1.37
YBX3-202ENST00000279550 USH1GQ495M9 461 aa23.59■■□□□ 1.37
YBX3-202ENST00000279550 C2orf69Q8N8R5 385 aa23.59■■□□□ 1.37
YBX3-202ENST00000279550 SLC10A4Q96EP9 437 aa23.59■■□□□ 1.37
YBX3-202ENST00000279550 P2RX7Q99572 595 aaKnown RBP23.59■■□□□ 1.37
YBX3-202ENST00000279550 GPBP1L1Q9HC44 474 aaPredicted RBP23.59■■□□□ 1.37
YBX3-202ENST00000279550 KCNH4Q9UQ05 1017 aa23.59■■□□□ 1.37
YBX3-202ENST00000279550 A0A0G2JLL6 359 aaPredicted RBP23.59■■□□□ 1.37
YBX3-202ENST00000279550 CXCL11O14625 94 aa23.59■■□□□ 1.37
YBX3-202ENST00000279550 RPN1P04843 607 aaKnown RBP23.59■■□□□ 1.37
YBX3-202ENST00000279550 KLHL10Q6JEL2 608 aa23.59■■□□□ 1.37
YBX3-202ENST00000279550 TMC6Q7Z403 805 aa23.59■■□□□ 1.37
YBX3-202ENST00000279550 PRRT2Q7Z6L0 340 aaPredicted RBP23.59■■□□□ 1.37
YBX3-202ENST00000279550 NAP1L5Q96NT1 182 aaPredicted RBP23.59■■□□□ 1.37
YBX3-202ENST00000279550 SPTLC3Q9NUV7 552 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms