RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 USP17L6PQ6QN14 398 aa7.51□□□□□ -1.21
CD44-204ENST00000279452 SEPT14Q6ZU15 432 aa7.51□□□□□ -1.21
CD44-204ENST00000279452 NECAB2Q7Z6G3 386 aa7.51□□□□□ -1.21
CD44-204ENST00000279452 ZNF713Q8N859 430 aaPredicted RBP7.51□□□□□ -1.21
CD44-204ENST00000279452 NECAB1Q8N987 351 aa7.51□□□□□ -1.21
CD44-204ENST00000279452 ARRDC4Q8NCT1 418 aa7.51□□□□□ -1.21
CD44-204ENST00000279452 RGS22Q8NE09 1264 aa7.51□□□□□ -1.21
CD44-204ENST00000279452 DIS3LQ8TF46 1054 aaKnown RBP7.51□□□□□ -1.21
CD44-204ENST00000279452 CCDC12Q8WUD4 166 aaPredicted RBP7.51□□□□□ -1.21
CD44-204ENST00000279452 PAWRQ96IZ0 340 aaKnown RBP7.51□□□□□ -1.21
CD44-204ENST00000279452 ZFP91Q96JP5 570 aaPredicted RBP7.51□□□□□ -1.21
CD44-204ENST00000279452 RNF26Q9BY78 433 aaPredicted RBP7.51□□□□□ -1.21
CD44-204ENST00000279452 AP5M1Q9H0R1 490 aa7.51□□□□□ -1.21
CD44-204ENST00000279452 C11orf49Q9H6J7 331 aa7.51□□□□□ -1.21
CD44-204ENST00000279452 EHMT1Q9H9B1 1298 aa7.51□□□□□ -1.21
CD44-204ENST00000279452 SPC25Q9HBM1 224 aa7.51□□□□□ -1.21
CD44-204ENST00000279452 VTA1Q9NP79 307 aa7.51□□□□□ -1.21
CD44-204ENST00000279452 PXMP2Q9NR77 195 aa7.51□□□□□ -1.21
CD44-204ENST00000279452 FAM217BQ9NTX9 383 aaPredicted RBP7.51□□□□□ -1.21
CD44-204ENST00000279452 SMCO2A6NFE2 343 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 STXBP3O00186 592 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 PRPF3O43395 683 aaKnown RBP7.5□□□□□ -1.21
CD44-204ENST00000279452 SORBS3O60504 671 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 PFKFB2O60825 505 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 DTNBO60941 627 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 LARGE1O95461 756 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 IFNAR1P17181 557 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 RBM25P49756 843 aaKnown RBP7.5□□□□□ -1.21
CD44-204ENST00000279452 FOSBP53539 338 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 EVCP57679 992 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 NLRP5P59047 1200 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 FUT2Q10981 343 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 RABEP1Q15276 862 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 LHX8Q68G74 356 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 RNF180Q86T96 592 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 TLK2Q86UE8 772 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 ANKLE1Q8NAG6 615 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 CCDC148Q8NFR7 591 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 DPF3Q92784 378 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 FERMT2Q96AC1 680 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 VTI1AQ96AJ9 217 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 PGBD1Q96JS3 809 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 PDCD2LQ9BRP1 358 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 HTATIP2Q9BUP3 242 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 WDR11Q9BZH6 1224 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 CRISPLD2Q9H0B8 497 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 C6orf50Q9HD87 102 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 PDGFCQ9NRA1 345 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 BARHL2Q9NY43 387 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 MAP3K20Q9NYL2 800 aaKnown RBP7.5□□□□□ -1.21
CD44-204ENST00000279452 VPS54Q9P1Q0 977 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 OGDHLQ9ULD0 1010 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 MRVI1Q9Y6F6 885 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 SYNRGQ9UMZ2 1314 aa7.5□□□□□ -1.21
CD44-204ENST00000279452 PLXNA1Q9UIW2 1896 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 LOC102724159A0A0B4J2E5 919 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 DNM1LO00429 736 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 DYNC1LI2O43237 492 aaPredicted RBP7.49□□□□□ -1.21
CD44-204ENST00000279452 DUSP11O75319 330 aaKnown RBP7.49□□□□□ -1.21
CD44-204ENST00000279452 DEXIO95424 95 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 IGHA2P01877 340 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 NR3C2P08235 984 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 TXNP10599 105 aaKnown RBP7.49□□□□□ -1.21
CD44-204ENST00000279452 SMPD1P17405 629 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 XBP1P17861 261 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 PTGS1P23219 599 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 ATN1P54259 1190 aaPredicted RBP7.49□□□□□ -1.21
CD44-204ENST00000279452 CHMP4BP1P59074 171 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 TTLL4Q14679 1199 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 PGM5Q15124 567 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 PWP2Q15269 919 aaKnown RBP7.49□□□□□ -1.21
CD44-204ENST00000279452 NTRK3Q16288 839 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 ME3Q16798 604 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 GNPTABQ3T906 1256 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 JAKMIP3Q5VZ66 844 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 TYW1BQ6NUM6 668 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 CCDC83Q8IWF9 413 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 SAMD3Q8N6K7 520 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 OR6J1Q8NGC5 347 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 IL31RAQ8NI17 732 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 SCFD2Q8WU76 684 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 GTF3C6Q969F1 213 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 TBC1D32Q96NH3 1257 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 IWS1Q96ST2 819 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 BACH2Q9BYV9 841 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 SENP6Q9GZR1 1112 aaPredicted RBP7.49□□□□□ -1.21
CD44-204ENST00000279452 MAF1Q9H063 256 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 ALDH8A1Q9H2A2 487 aaPredicted RBP7.49□□□□□ -1.21
CD44-204ENST00000279452 RIC8AQ9NPQ8 531 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 TMEM260Q9NX78 707 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 RTEL1Q9NZ71 1219 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 PKD2L1Q9P0L9 805 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 PCDHA6Q9UN73 950 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 LIMCH1Q9UPQ0 1083 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 PCDHA8Q9Y5H6 950 aa7.49□□□□□ -1.21
CD44-204ENST00000279452 MYADML2A6NDP7 307 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 LRRC37A2A6NM11 1700 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 PIK3CDO00329 1044 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 MEIS2O14770 477 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 ADCY6O43306 1168 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms