RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 PLEKHA8P1O95397 391 aa14.16□□□□□ -0.14
HERC6-202ENST00000273960 CALRP27797 417 aaKnown RBP14.16□□□□□ -0.14
HERC6-202ENST00000273960 KIF11P52732 1056 aa14.16□□□□□ -0.14
HERC6-202ENST00000273960 IFFO1Q0D2I5 559 aa14.16□□□□□ -0.14
HERC6-202ENST00000273960 KRT71Q3SY84 523 aa14.16□□□□□ -0.14
HERC6-202ENST00000273960 CRACR2BQ8N4Y2 399 aaPredicted RBP14.16□□□□□ -0.14
HERC6-202ENST00000273960 ARMC2Q8NEN0 867 aa14.16□□□□□ -0.14
HERC6-202ENST00000273960 MTMR8Q96EF0 704 aa14.16□□□□□ -0.14
HERC6-202ENST00000273960 EXOC1Q9NV70 894 aa14.16□□□□□ -0.14
HERC6-202ENST00000273960 THRAP3Q9Y2W1 955 aaKnown RBP14.16□□□□□ -0.14
HERC6-202ENST00000273960 ADAMTS3O15072 1205 aa14.16□□□□□ -0.14
HERC6-202ENST00000273960 IFNAR1P17181 557 aa14.16□□□□□ -0.14
HERC6-202ENST00000273960 A1CFQ9NQ94 594 aaKnown RBP14.16□□□□□ -0.14
HERC6-202ENST00000273960 SPATS2LQ9NUQ6 558 aaKnown RBP14.16□□□□□ -0.14
HERC6-202ENST00000273960 DEXIO95424 95 aa14.16□□□□□ -0.14
HERC6-202ENST00000273960 ANP32DO95626 131 aa14.16□□□□□ -0.14
HERC6-202ENST00000273960 SLC1A4P43007 532 aa14.16□□□□□ -0.14
HERC6-202ENST00000273960 IQCKQ8N0W5 287 aa14.16□□□□□ -0.14
HERC6-202ENST00000273960 RAPGEF5Q92565 580 aa14.16□□□□□ -0.14
HERC6-202ENST00000273960 SHISA4Q96DD7 197 aa14.16□□□□□ -0.14
HERC6-202ENST00000273960 DNAJC7Q99615 494 aa14.16□□□□□ -0.14
HERC6-202ENST00000273960 FOXP1Q9H334 677 aaPredicted RBP14.16□□□□□ -0.14
HERC6-202ENST00000273960 AATFQ9NY61 560 aaKnown RBP eCLIP14.16□□□□□ -0.14
HERC6-202ENST00000273960 VEGFAP15692 232 aaPredicted RBP14.15□□□□□ -0.14
HERC6-202ENST00000273960 KRT2P35908 639 aa14.15□□□□□ -0.14
HERC6-202ENST00000273960 ITGB3BPQ13352 177 aaPredicted RBP14.15□□□□□ -0.14
HERC6-202ENST00000273960 RABL6Q3YEC7 729 aaPredicted RBP14.15□□□□□ -0.14
HERC6-202ENST00000273960 WLSQ5T9L3 541 aa14.15□□□□□ -0.14
HERC6-202ENST00000273960 MAGEB6Q8N7X4 407 aa14.15□□□□□ -0.14
HERC6-202ENST00000273960 PIK3R5Q8WYR1 880 aa14.15□□□□□ -0.14
HERC6-202ENST00000273960 A8MUI8 341 aa14.15□□□□□ -0.14
HERC6-202ENST00000273960 RAD51CO43502 376 aa14.15□□□□□ -0.14
HERC6-202ENST00000273960 ATP6V1G2O95670 118 aa14.15□□□□□ -0.14
HERC6-202ENST00000273960 GKAP1Q5VSY0 366 aaPredicted RBP14.15□□□□□ -0.14
HERC6-202ENST00000273960 CACNA2D4Q7Z3S7 1137 aa14.15□□□□□ -0.14
HERC6-202ENST00000273960 CCDC63Q8NA47 563 aa14.15□□□□□ -0.14
HERC6-202ENST00000273960 FANCBQ8NB91 859 aa14.15□□□□□ -0.14
HERC6-202ENST00000273960 ZNF483Q8TF39 744 aaPredicted RBP14.15□□□□□ -0.14
HERC6-202ENST00000273960 CNOT6LQ96LI5 555 aaKnown RBP14.15□□□□□ -0.14
HERC6-202ENST00000273960 UIMC1Q96RL1 719 aa14.15□□□□□ -0.14
HERC6-202ENST00000273960 CAMTA1Q9Y6Y1 1673 aa14.15□□□□□ -0.14
HERC6-202ENST00000273960 CTNND1O60716 968 aaKnown RBP14.14□□□□□ -0.15
HERC6-202ENST00000273960 VIMP08670 466 aaKnown RBP14.14□□□□□ -0.15
HERC6-202ENST00000273960 FLT3P36888 993 aa14.14□□□□□ -0.15
HERC6-202ENST00000273960 CFAP221Q4G0U5 840 aa14.14□□□□□ -0.15
HERC6-202ENST00000273960 MARCH10Q8NA82 808 aaPredicted RBP14.14□□□□□ -0.15
HERC6-202ENST00000273960 MGARPQ8TDB4 240 aa14.14□□□□□ -0.15
HERC6-202ENST00000273960 TMEM87BQ96K49 555 aa14.14□□□□□ -0.15
HERC6-202ENST00000273960 ELAC2Q9BQ52 826 aaKnown RBP14.14□□□□□ -0.15
HERC6-202ENST00000273960 ARHGAP20Q9P2F6 1191 aa14.14□□□□□ -0.15
HERC6-202ENST00000273960 CYP2D7A0A087X1C5 515 aa14.14□□□□□ -0.15
HERC6-202ENST00000273960 UBAP1LF5GYI3 381 aa14.14□□□□□ -0.15
HERC6-202ENST00000273960 ZFYP08048 801 aaPredicted RBP14.14□□□□□ -0.15
HERC6-202ENST00000273960 NLRP5P59047 1200 aa14.14□□□□□ -0.15
HERC6-202ENST00000273960 CAPRIN2Q6IMN6 1127 aaKnown RBP14.14□□□□□ -0.15
HERC6-202ENST00000273960 LRP10Q7Z4F1 713 aa14.14□□□□□ -0.15
HERC6-202ENST00000273960 SPATS2Q86XZ4 545 aaKnown RBP14.14□□□□□ -0.15
HERC6-202ENST00000273960 CCDC170Q8IYT3 715 aa14.14□□□□□ -0.15
HERC6-202ENST00000273960 ZNF654Q8IZM8 581 aa14.14□□□□□ -0.15
HERC6-202ENST00000273960 SPICE1Q8N0Z3 855 aa14.14□□□□□ -0.15
HERC6-202ENST00000273960 FNBP4Q8N3X1 1017 aaPredicted RBP14.14□□□□□ -0.15
HERC6-202ENST00000273960 NUP58Q9BVL2 599 aa14.14□□□□□ -0.15
HERC6-202ENST00000273960 MLXIPLQ9NP71 852 aa14.14□□□□□ -0.15
HERC6-202ENST00000273960 G3BP2Q9UN86 482 aaKnown RBP14.14□□□□□ -0.15
HERC6-202ENST00000273960 PSMA7O14818 248 aa14.14□□□□□ -0.15
HERC6-202ENST00000273960 PALMO75781 387 aa14.14□□□□□ -0.15
HERC6-202ENST00000273960 ELF3P78545 371 aaPredicted RBP14.14□□□□□ -0.15
HERC6-202ENST00000273960 ZNF658Q5TYW1 1059 aaPredicted RBP14.14□□□□□ -0.15
HERC6-202ENST00000273960 TLR10Q9BXR5 811 aa14.14□□□□□ -0.15
HERC6-202ENST00000273960 CACNA1FO60840 1977 aa14.14□□□□□ -0.15
HERC6-202ENST00000273960 ADAMTSL3P82987 1691 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 ANO9A1A5B4 782 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 TMCO5BA8MYB1 307 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 TCP1P17987 556 aaKnown RBP14.13□□□□□ -0.15
HERC6-202ENST00000273960 HSD17B3P37058 310 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 NLRP10Q86W26 655 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 SH2D4AQ9H788 454 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 PANK4Q9NVE7 773 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 RASSF10A6NK89 507 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 H7C1D1 291 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 KCNK3O14649 394 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 FCER1AP12319 257 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 SLC8A1P32418 973 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 GIGYF2Q6Y7W6 1299 aaKnown RBP14.13□□□□□ -0.15
HERC6-202ENST00000273960 ZNF579Q8NAF0 562 aaKnown RBP14.13□□□□□ -0.15
HERC6-202ENST00000273960 LRP2BPQ9P2M1 347 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 RFX7Q2KHR2 1363 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 MPHOSPH10O00566 681 aaKnown RBP14.13□□□□□ -0.15
HERC6-202ENST00000273960 SEMA3EO15041 775 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 CEP104O60308 925 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 PDE6AP16499 860 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 XBP1P17861 261 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 FECHP22830 423 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 PHKA1P46020 1223 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 SLCO1A2P46721 670 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 DNM2P50570 870 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 ZBED6P86452 979 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 SH3RF1Q7Z6J0 888 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 IFNL3Q8IZI9 196 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 ZBTB38Q8NAP3 1195 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms