RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 ANKRD35Q8N283 1001 aa20.42■□□□□ 0.86
SEC22C-202ENST00000273156 RIPK3Q9Y572 518 aa20.42■□□□□ 0.86
SEC22C-202ENST00000273156 PDHBP11177 359 aa20.42■□□□□ 0.86
SEC22C-202ENST00000273156 KLHL40Q2TBA0 621 aa20.42■□□□□ 0.86
SEC22C-202ENST00000273156 ASPRV1Q53RT3 343 aa20.42■□□□□ 0.86
SEC22C-202ENST00000273156 CHRDL2Q6WN34 429 aa20.42■□□□□ 0.86
SEC22C-202ENST00000273156 DNAJC25-GNG10A0A024R161 153 aa20.41■□□□□ 0.86
SEC22C-202ENST00000273156 PFASO15067 1338 aa20.41■□□□□ 0.86
SEC22C-202ENST00000273156 MBD3O95983 291 aa20.41■□□□□ 0.86
SEC22C-202ENST00000273156 MMP1P03956 469 aa20.41■□□□□ 0.86
SEC22C-202ENST00000273156 SNHG28P0DPA3 235 aa20.41■□□□□ 0.86
SEC22C-202ENST00000273156 SCG2P13521 617 aa20.41■□□□□ 0.86
SEC22C-202ENST00000273156 PFKFB3Q16875 520 aaPredicted RBP20.41■□□□□ 0.86
SEC22C-202ENST00000273156 SYNGAP1Q96PV0 1343 aa20.41■□□□□ 0.86
SEC22C-202ENST00000273156 SPZ1Q9BXG8 430 aa20.41■□□□□ 0.86
SEC22C-202ENST00000273156 TFIP11Q9UBB9 837 aaKnown RBP20.41■□□□□ 0.86
SEC22C-202ENST00000273156 PNMA2Q9UL42 364 aa20.41■□□□□ 0.86
SEC22C-202ENST00000273156 KBTBD13C9JR72 458 aa20.4■□□□□ 0.86
SEC22C-202ENST00000273156 GOLGA8HP0CJ92 632 aa20.4■□□□□ 0.86
SEC22C-202ENST00000273156 CCDC96Q2M329 555 aa20.4■□□□□ 0.86
SEC22C-202ENST00000273156 KCTD1Q719H9 257 aa20.4■□□□□ 0.86
SEC22C-202ENST00000273156 C7orf61Q8IZ16 206 aa20.4■□□□□ 0.86
SEC22C-202ENST00000273156 ACAD9Q9H845 621 aa20.4■□□□□ 0.86
SEC22C-202ENST00000273156 ELP1O95163 1332 aa20.39■□□□□ 0.86
SEC22C-202ENST00000273156 A0A1W2PPC1 479 aa20.39■□□□□ 0.86
SEC22C-202ENST00000273156 hCG_1642624A0A1W2PR95 340 aa20.39■□□□□ 0.86
SEC22C-202ENST00000273156 RARBP10826 455 aa20.39■□□□□ 0.86
SEC22C-202ENST00000273156 U2AF2P26368 475 aaKnown RBP eCLIP20.39■□□□□ 0.863e-6■■■■□ 23.8
SEC22C-202ENST00000273156 GPATCH4Q5T3I0 446 aaKnown RBP20.39■□□□□ 0.86
SEC22C-202ENST00000273156 MAMDC4Q6UXC1 1216 aa20.39■□□□□ 0.86
SEC22C-202ENST00000273156 SPATA32Q96LK8 384 aa20.39■□□□□ 0.86
SEC22C-202ENST00000273156 SENP6Q9GZR1 1112 aaPredicted RBP20.39■□□□□ 0.86
SEC22C-202ENST00000273156 FOXP1Q9H334 677 aaPredicted RBP20.39■□□□□ 0.86
SEC22C-202ENST00000273156 PARP14Q460N5 1801 aa20.39■□□□□ 0.85
SEC22C-202ENST00000273156 UBE2HP62256 183 aa20.38■□□□□ 0.85
SEC22C-202ENST00000273156 PRAMEF19Q5SWL8 479 aa20.38■□□□□ 0.85
SEC22C-202ENST00000273156 BRMS1Q9HCU9 246 aa20.38■□□□□ 0.85
SEC22C-202ENST00000273156 PRR12Q9ULL5 1215 aa20.38■□□□□ 0.85
SEC22C-202ENST00000273156 KCNJ14Q9UNX9 436 aa20.38■□□□□ 0.85
SEC22C-202ENST00000273156 KIF28PB7ZC32 967 aa20.38■□□□□ 0.85
SEC22C-202ENST00000273156 AKR1A1P14550 325 aa20.38■□□□□ 0.85
SEC22C-202ENST00000273156 MYSM1Q5VVJ2 828 aa20.38■□□□□ 0.85
SEC22C-202ENST00000273156 BTNL9Q6UXG8 535 aa20.38■□□□□ 0.85
SEC22C-202ENST00000273156 DIS3L2Q8IYB7 885 aaKnown RBP20.38■□□□□ 0.85
SEC22C-202ENST00000273156 RRP36Q96EU6 259 aaKnown RBP20.38■□□□□ 0.85
SEC22C-202ENST00000273156 SH3GLB2Q9NR46 395 aa20.38■□□□□ 0.85
SEC22C-202ENST00000273156 VPS54Q9P1Q0 977 aa20.38■□□□□ 0.85
SEC22C-202ENST00000273156 MYH4Q9Y623 1939 aa20.37■□□□□ 0.85
SEC22C-202ENST00000273156 ZNF543Q08ER8 600 aa20.37■□□□□ 0.85
SEC22C-202ENST00000273156 FAM177A1Q8N128 213 aaPredicted RBP20.37■□□□□ 0.85
SEC22C-202ENST00000273156 LEO1Q8WVC0 666 aaPredicted RBP20.37■□□□□ 0.85
SEC22C-202ENST00000273156 PIBF1Q8WXW3 757 aa20.37■□□□□ 0.85
SEC22C-202ENST00000273156 PHF20Q9BVI0 1012 aa20.37■□□□□ 0.85
SEC22C-202ENST00000273156 HOMER2Q9NSB8 354 aa20.37■□□□□ 0.85
SEC22C-202ENST00000273156 RNF146Q9NTX7 359 aa20.37■□□□□ 0.85
SEC22C-202ENST00000273156 SEC63Q9UGP8 760 aaKnown RBP20.37■□□□□ 0.85
SEC22C-202ENST00000273156 CYTH3O43739 400 aa20.36■□□□□ 0.85
SEC22C-202ENST00000273156 RNF180Q86T96 592 aa20.36■□□□□ 0.85
SEC22C-202ENST00000273156 AGBL1Q96MI9 1066 aa20.36■□□□□ 0.85
SEC22C-202ENST00000273156 TRERF1Q96PN7 1200 aa20.36■□□□□ 0.85
SEC22C-202ENST00000273156 RIOX1Q9H6W3 641 aa20.36■□□□□ 0.85
SEC22C-202ENST00000273156 XPNPEP3Q9NQH7 507 aa20.36■□□□□ 0.85
SEC22C-202ENST00000273156 FAM184BQ9ULE4 1060 aa20.36■□□□□ 0.85
SEC22C-202ENST00000273156 ZNF536O15090 1300 aa20.36■□□□□ 0.85
SEC22C-202ENST00000273156 FRMPD2Q68DX3 1309 aaPredicted RBP20.36■□□□□ 0.85
SEC22C-202ENST00000273156 GOLGA6L4A6NEF3 574 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 BTBD18B2RXH4 712 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 POTEB2H3BUK9 544 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 ICAM1P05362 532 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 ZNF865P0CJ78 1059 aaPredicted RBP20.35■□□□□ 0.85
SEC22C-202ENST00000273156 KRT2P35908 639 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 NLRP5P59047 1200 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 GJC2Q5T442 439 aaPredicted RBP20.35■□□□□ 0.85
SEC22C-202ENST00000273156 SYDE2Q5VT97 1194 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 NOSTRINQ8IVI9 506 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 USP28Q96RU2 1077 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 PRO3102Q9H379 93 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 ABHD16BQ9H3Z7 469 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 GPCPD1Q9NPB8 672 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 RTEL1Q9NZ71 1219 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 RCOR1Q9UKL0 485 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 CCPG1Q9ULG6 757 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 GADD45BO75293 160 aaPredicted RBP20.35■□□□□ 0.85
SEC22C-202ENST00000273156 ALAS1P13196 640 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 CALML3P27482 149 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 LRRC26Q2I0M4 334 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 CCDC174Q6PII3 467 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 RASGRP2Q7LDG7 609 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 GPT2Q8TD30 523 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 UBA5Q9GZZ9 404 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 RANBP17Q9H2T7 1088 aaKnown RBP20.35■□□□□ 0.85
SEC22C-202ENST00000273156 VAT1LQ9HCJ6 419 aa20.35■□□□□ 0.85
SEC22C-202ENST00000273156 COL11A1P12107 1806 aaPredicted RBP20.34■□□□□ 0.85
SEC22C-202ENST00000273156 SNAI1O95863 264 aaPredicted RBP20.34■□□□□ 0.85
SEC22C-202ENST00000273156 MYCNP04198 464 aaPredicted RBP20.34■□□□□ 0.85
SEC22C-202ENST00000273156 BMP8BP34820 402 aa20.34■□□□□ 0.85
SEC22C-202ENST00000273156 CEBPZQ03701 1054 aaKnown RBP20.34■□□□□ 0.85
SEC22C-202ENST00000273156 LRRC41Q15345 812 aa20.34■□□□□ 0.85
SEC22C-202ENST00000273156 SLC35G1Q2M3R5 365 aa20.34■□□□□ 0.85
SEC22C-202ENST00000273156 ANO1Q5XXA6 986 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms