RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 FBXO11Q86XK2 927 aa20.42■□□□□ 0.86
CSNK1D-201ENST00000269361 NSUN6Q8TEA1 469 aaKnown RBP20.42■□□□□ 0.86
CSNK1D-201ENST00000269361 HERVK_113Q902F9 699 aa20.42■□□□□ 0.86
CSNK1D-201ENST00000269361 COPS5Q92905 334 aa20.42■□□□□ 0.86
CSNK1D-201ENST00000269361 TIFAQ96CG3 184 aa20.42■□□□□ 0.86
CSNK1D-201ENST00000269361 TAAR1Q96RJ0 339 aa20.42■□□□□ 0.86
CSNK1D-201ENST00000269361 MRPL11Q9Y3B7 192 aaKnown RBP20.42■□□□□ 0.86
CSNK1D-201ENST00000269361 LCTP09848 1927 aa20.42■□□□□ 0.86
CSNK1D-201ENST00000269361 RAD50Q92878 1312 aa20.42■□□□□ 0.86
CSNK1D-201ENST00000269361 SUPT20HL2P0C7V6 817 aa20.41■□□□□ 0.86
CSNK1D-201ENST00000269361 FOSL2P15408 326 aa20.41■□□□□ 0.86
CSNK1D-201ENST00000269361 TTLL4Q14679 1199 aa20.41■□□□□ 0.86
CSNK1D-201ENST00000269361 GRIN2CQ14957 1233 aa20.41■□□□□ 0.86
CSNK1D-201ENST00000269361 SEC23AQ15436 765 aa20.41■□□□□ 0.86
CSNK1D-201ENST00000269361 CYB5R4Q7L1T6 521 aa20.41■□□□□ 0.86
CSNK1D-201ENST00000269361 WNT8AQ9H1J5 351 aa20.41■□□□□ 0.86
CSNK1D-201ENST00000269361 ZNF576Q9H609 170 aa20.41■□□□□ 0.86
CSNK1D-201ENST00000269361 TRMT13Q9NUP7 481 aaKnown RBP20.41■□□□□ 0.86
CSNK1D-201ENST00000269361 COL20A1Q9P218 1284 aa20.41■□□□□ 0.86
CSNK1D-201ENST00000269361 ARIH2O95376 493 aa20.4■□□□□ 0.86
CSNK1D-201ENST00000269361 PBX2P40425 430 aa20.4■□□□□ 0.86
CSNK1D-201ENST00000269361 NBPF20Q3BBV1 942 aa20.4■□□□□ 0.86
CSNK1D-201ENST00000269361 CCDC62Q6P9F0 684 aa20.4■□□□□ 0.86
CSNK1D-201ENST00000269361 UNC80Q8N2C7 3258 aa20.4■□□□□ 0.86
CSNK1D-201ENST00000269361 STAG2Q8N3U4 1231 aa20.4■□□□□ 0.86
CSNK1D-201ENST00000269361 RUFY2Q8WXA3 655 aa20.4■□□□□ 0.86
CSNK1D-201ENST00000269361 IWS1Q96ST2 819 aa20.4■□□□□ 0.86
CSNK1D-201ENST00000269361 RMDN3Q96TC7 470 aa20.4■□□□□ 0.86
CSNK1D-201ENST00000269361 PBX4Q9BYU1 374 aa20.4■□□□□ 0.86
CSNK1D-201ENST00000269361 MTIF3Q9H2K0 278 aaKnown RBP20.4■□□□□ 0.86
CSNK1D-201ENST00000269361 CXXC1Q9P0U4 656 aaPredicted RBP20.4■□□□□ 0.86
CSNK1D-201ENST00000269361 KLRF2D3W0D1 207 aa20.39■□□□□ 0.85
CSNK1D-201ENST00000269361 CYP2C9P11712 490 aa20.39■□□□□ 0.85
CSNK1D-201ENST00000269361 CHMLP26374 656 aa20.39■□□□□ 0.85
CSNK1D-201ENST00000269361 TRDNQ13061 729 aa20.39■□□□□ 0.85
CSNK1D-201ENST00000269361 STXBP2Q15833 593 aa20.39■□□□□ 0.85
CSNK1D-201ENST00000269361 SEPT14Q6ZU15 432 aa20.39■□□□□ 0.85
CSNK1D-201ENST00000269361 OTOP2Q7RTS6 562 aa20.39■□□□□ 0.85
CSNK1D-201ENST00000269361 RPUSD2Q8IZ73 545 aaKnown RBP20.39■□□□□ 0.85
CSNK1D-201ENST00000269361 AMNQ9BXJ7 453 aa20.39■□□□□ 0.85
CSNK1D-201ENST00000269361 U3KPZ7 1027 aaPredicted RBP20.39■□□□□ 0.85
CSNK1D-201ENST00000269361 PTH1RQ03431 593 aa20.38■□□□□ 0.85
CSNK1D-201ENST00000269361 FAM47CQ5HY64 1035 aa20.38■□□□□ 0.85
CSNK1D-201ENST00000269361 NFRKBQ6P4R8 1299 aa20.38■□□□□ 0.85
CSNK1D-201ENST00000269361 SCLYQ96I15 445 aa20.38■□□□□ 0.85
CSNK1D-201ENST00000269361 MAD2L2Q9UI95 211 aa20.38■□□□□ 0.85
CSNK1D-201ENST00000269361 LAMA4Q16363 1823 aa20.37■□□□□ 0.85
CSNK1D-201ENST00000269361 PALM3A6NDB9 673 aaPredicted RBP20.37■□□□□ 0.85
CSNK1D-201ENST00000269361 CYP21A2P08686 494 aa20.37■□□□□ 0.85
CSNK1D-201ENST00000269361 IRX6P78412 446 aaPredicted RBP20.37■□□□□ 0.85
CSNK1D-201ENST00000269361 LY6KQ17RY6 165 aa20.37■□□□□ 0.85
CSNK1D-201ENST00000269361 ARHGEF16Q5VV41 709 aa20.37■□□□□ 0.85
CSNK1D-201ENST00000269361 AFG1LQ8WV93 481 aa20.37■□□□□ 0.85
CSNK1D-201ENST00000269361 VWCEQ96DN2 955 aa20.37■□□□□ 0.85
CSNK1D-201ENST00000269361 MTMR8Q96EF0 704 aa20.37■□□□□ 0.85
CSNK1D-201ENST00000269361 CDH23Q9H251 3354 aa20.36■□□□□ 0.85
CSNK1D-201ENST00000269361 OPLAHO14841 1288 aa20.36■□□□□ 0.85
CSNK1D-201ENST00000269361 ZBTB5O15062 677 aa20.36■□□□□ 0.85
CSNK1D-201ENST00000269361 PPP1R11O60927 126 aaPredicted RBP20.36■□□□□ 0.85
CSNK1D-201ENST00000269361 EIF3JO75822 258 aaKnown RBP20.36■□□□□ 0.85
CSNK1D-201ENST00000269361 CFBP00751 764 aa20.36■□□□□ 0.85
CSNK1D-201ENST00000269361 GH1P01241 217 aa20.36■□□□□ 0.85
CSNK1D-201ENST00000269361 PTPN11Q06124 597 aaPredicted RBP20.36■□□□□ 0.85
CSNK1D-201ENST00000269361 RAB30Q15771 203 aa20.36■□□□□ 0.85
CSNK1D-201ENST00000269361 PPP1R13LQ8WUF5 828 aa20.36■□□□□ 0.85
CSNK1D-201ENST00000269361 MSRAQ9UJ68 235 aa20.36■□□□□ 0.85
CSNK1D-201ENST00000269361 EYSQ5T1H1 3165 aa20.35■□□□□ 0.85
CSNK1D-201ENST00000269361 IFIT3O14879 490 aaKnown RBP20.35■□□□□ 0.85
CSNK1D-201ENST00000269361 NR3C2P08235 984 aa20.35■□□□□ 0.85
CSNK1D-201ENST00000269361 EIF2AK2P19525 551 aaKnown RBP20.35■□□□□ 0.85
CSNK1D-201ENST00000269361 HSD17B4P51659 736 aa20.35■□□□□ 0.85
CSNK1D-201ENST00000269361 GHRHRQ02643 423 aa20.35■□□□□ 0.85
CSNK1D-201ENST00000269361 ARHGAP1Q07960 439 aa20.35■□□□□ 0.85
CSNK1D-201ENST00000269361 COL25A1Q9BXS0 654 aaPredicted RBP20.35■□□□□ 0.85
CSNK1D-201ENST00000269361 PXMP2Q9NR77 195 aa20.35■□□□□ 0.85
CSNK1D-201ENST00000269361 PCDHA1Q9Y5I3 950 aa20.35■□□□□ 0.85
CSNK1D-201ENST00000269361 CUL9Q8IWT3 2517 aa20.35■□□□□ 0.85
CSNK1D-201ENST00000269361 E7EWF7 191 aa20.34■□□□□ 0.85
CSNK1D-201ENST00000269361 SGSM2O43147 1006 aa20.34■□□□□ 0.85
CSNK1D-201ENST00000269361 PFKMP08237 780 aa20.34■□□□□ 0.85
CSNK1D-201ENST00000269361 MMP3P08254 477 aa20.34■□□□□ 0.85
CSNK1D-201ENST00000269361 CHMP4BP1P59074 171 aa20.34■□□□□ 0.85
CSNK1D-201ENST00000269361 GRM4Q14833 912 aa20.34■□□□□ 0.85
CSNK1D-201ENST00000269361 CHST3Q7LGC8 479 aa20.34■□□□□ 0.85
CSNK1D-201ENST00000269361 RALYLQ86SE5 291 aaKnown RBP20.34■□□□□ 0.85
CSNK1D-201ENST00000269361 MAP3K20Q9NYL2 800 aaKnown RBP20.34■□□□□ 0.85
CSNK1D-201ENST00000269361 DDX41Q9UJV9 622 aaKnown RBP20.34■□□□□ 0.85
CSNK1D-201ENST00000269361 TAF6LQ9Y6J9 622 aa20.34■□□□□ 0.85
CSNK1D-201ENST00000269361 SLC4A7Q9Y6M7 1214 aa20.34■□□□□ 0.85
CSNK1D-201ENST00000269361 ERICH2A1L162 156 aa20.33■□□□□ 0.85
CSNK1D-201ENST00000269361 SLC35G1Q2M3R5 365 aa20.33■□□□□ 0.85
CSNK1D-201ENST00000269361 STOX1Q6ZVD7 989 aa20.33■□□□□ 0.85
CSNK1D-201ENST00000269361 DEFB128Q7Z7B8 93 aa20.33■□□□□ 0.85
CSNK1D-201ENST00000269361 RETREG2Q8NC44 543 aa20.33■□□□□ 0.85
CSNK1D-201ENST00000269361 NCOA7Q8NI08 942 aa20.33■□□□□ 0.85
CSNK1D-201ENST00000269361 RIOX1Q9H6W3 641 aa20.33■□□□□ 0.85
CSNK1D-201ENST00000269361 SENP2Q9HC62 589 aa20.33■□□□□ 0.85
CSNK1D-201ENST00000269361 CHD9Q3L8U1 2897 aa20.32■□□□□ 0.84
CSNK1D-201ENST00000269361 PITPNM1O00562 1244 aa20.32■□□□□ 0.84
CSNK1D-201ENST00000269361 CASTP20810 708 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms