RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 MDM2Q00987 491 aaPredicted RBP15.96■□□□□ 0.14
SS18-201ENST00000269137 PDIA5Q14554 519 aa15.96■□□□□ 0.14
SS18-201ENST00000269137 Q4G0T1 1027 aa15.96■□□□□ 0.14
SS18-201ENST00000269137 FCHSD1Q86WN1 690 aa15.96■□□□□ 0.14
SS18-201ENST00000269137 PDILTQ8N807 584 aa15.96■□□□□ 0.14
SS18-201ENST00000269137 IGSF22Q8N9C0 903 aa15.96■□□□□ 0.14
SS18-201ENST00000269137 CCDC34Q96HJ3 373 aa15.96■□□□□ 0.14
SS18-201ENST00000269137 WNK4Q96J92 1243 aa15.96■□□□□ 0.14
SS18-201ENST00000269137 PANK2Q9BZ23 570 aa15.96■□□□□ 0.14
SS18-201ENST00000269137 MAF1Q9H063 256 aa15.96■□□□□ 0.14
SS18-201ENST00000269137 SERTAD1Q9UHV2 236 aa15.96■□□□□ 0.14
SS18-201ENST00000269137 ZNF214Q9UL59 606 aaPredicted RBP15.96■□□□□ 0.14
SS18-201ENST00000269137 SPDYE16A6NNV3 312 aaPredicted RBP15.95■□□□□ 0.14
SS18-201ENST00000269137 NFIBO00712 420 aa15.95■□□□□ 0.14
SS18-201ENST00000269137 CAVIN2O95810 425 aa15.95■□□□□ 0.14
SS18-201ENST00000269137 E2F4Q16254 413 aa15.95■□□□□ 0.14
SS18-201ENST00000269137 TMEM266Q2M3C6 531 aa15.95■□□□□ 0.14
SS18-201ENST00000269137 TREML2Q5T2D2 321 aa15.95■□□□□ 0.14
SS18-201ENST00000269137 IQUBQ8NA54 791 aa15.95■□□□□ 0.14
SS18-201ENST00000269137 HAS1Q92839 578 aa15.95■□□□□ 0.14
SS18-201ENST00000269137 OPTNQ96CV9 577 aa15.95■□□□□ 0.14
SS18-201ENST00000269137 RAB34Q9BZG1 259 aa15.95■□□□□ 0.14
SS18-201ENST00000269137 KCNMB3Q9NPA1 279 aa15.95■□□□□ 0.14
SS18-201ENST00000269137 COL11A1P12107 1806 aaPredicted RBP15.95■□□□□ 0.14
SS18-201ENST00000269137 TBX3O15119 743 aa15.94■□□□□ 0.14
SS18-201ENST00000269137 UBA7P41226 1012 aa15.94■□□□□ 0.14
SS18-201ENST00000269137 TXKP42681 527 aa15.94■□□□□ 0.14
SS18-201ENST00000269137 TKFCQ3LXA3 575 aa15.94■□□□□ 0.14
SS18-201ENST00000269137 DHX58Q96C10 678 aa15.94■□□□□ 0.14
SS18-201ENST00000269137 TRERF1Q96PN7 1200 aa15.94■□□□□ 0.14
SS18-201ENST00000269137 TEX13BQ9BXU2 312 aa15.94■□□□□ 0.14
SS18-201ENST00000269137 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.94■□□□□ 0.14
SS18-201ENST00000269137 TUBE1Q9UJT0 475 aa15.94■□□□□ 0.14
SS18-201ENST00000269137 RABGAP1Q9Y3P9 1069 aa15.94■□□□□ 0.14
SS18-201ENST00000269137 TECP42680 631 aa15.94■□□□□ 0.14
SS18-201ENST00000269137 TMEM132BQ14DG7 1078 aa15.94■□□□□ 0.14
SS18-201ENST00000269137 STX1AQ16623 288 aa15.94■□□□□ 0.14
SS18-201ENST00000269137 MUM1L1Q5H9M0 696 aa15.94■□□□□ 0.14
SS18-201ENST00000269137 SH3RF1Q7Z6J0 888 aa15.94■□□□□ 0.14
SS18-201ENST00000269137 SLFN12Q8IYM2 578 aa15.94■□□□□ 0.14
SS18-201ENST00000269137 MB21D1Q8N884 522 aa15.94■□□□□ 0.14
SS18-201ENST00000269137 LENG9Q96B70 501 aa15.94■□□□□ 0.14
SS18-201ENST00000269137 SLC10A4Q96EP9 437 aa15.94■□□□□ 0.14
SS18-201ENST00000269137 MOGSQ13724 837 aa15.93■□□□□ 0.14
SS18-201ENST00000269137 POSTNQ15063 836 aa15.93■□□□□ 0.14
SS18-201ENST00000269137 SNRNP48Q6IEG0 339 aaKnown RBP15.93■□□□□ 0.14
SS18-201ENST00000269137 LBX2Q6XYB7 198 aa15.93■□□□□ 0.14
SS18-201ENST00000269137 GADL1Q6ZQY3 521 aa15.93■□□□□ 0.14
SS18-201ENST00000269137 FASTKD5Q7L8L6 764 aaKnown RBP15.93■□□□□ 0.14
SS18-201ENST00000269137 CEP57L1Q8IYX8 460 aa15.93■□□□□ 0.14
SS18-201ENST00000269137 TTC12Q9H892 705 aaPredicted RBP15.93■□□□□ 0.14
SS18-201ENST00000269137 RNF146Q9NTX7 359 aa15.93■□□□□ 0.14
SS18-201ENST00000269137 ANO10Q9NW15 660 aa15.93■□□□□ 0.14
SS18-201ENST00000269137 AGTPBP1Q9UPW5 1226 aa15.93■□□□□ 0.14
SS18-201ENST00000269137 RBBP6Q7Z6E9 1792 aaKnown RBP15.93■□□□□ 0.14
SS18-201ENST00000269137 RPTORQ8N122 1335 aa15.93■□□□□ 0.14
SS18-201ENST00000269137 PP2D1A8MPX8 630 aa15.92■□□□□ 0.14
SS18-201ENST00000269137 FAM86B1E9PN63 330 aa15.92■□□□□ 0.14
SS18-201ENST00000269137 FAM86B2P0C5J1 330 aa15.92■□□□□ 0.14
SS18-201ENST00000269137 CDC25AP30304 524 aa15.92■□□□□ 0.14
SS18-201ENST00000269137 FMR1Q06787 632 aaKnown RBP eCLIP15.92■□□□□ 0.14
SS18-201ENST00000269137 PRR16Q569H4 304 aa15.92■□□□□ 0.14
SS18-201ENST00000269137 ETNPPLQ8TBG4 499 aa15.92■□□□□ 0.14
SS18-201ENST00000269137 SYTL5Q8TDW5 730 aaPredicted RBP15.92■□□□□ 0.14
SS18-201ENST00000269137 ERCC4Q92889 916 aaPredicted RBP15.92■□□□□ 0.14
SS18-201ENST00000269137 FAM20AQ96MK3 541 aa15.92■□□□□ 0.14
SS18-201ENST00000269137 NMRK2Q9NPI5 230 aa15.92■□□□□ 0.14
SS18-201ENST00000269137 DISC1Q9NRI5 854 aa15.92■□□□□ 0.14
SS18-201ENST00000269137 HOMER2Q9NSB8 354 aa15.92■□□□□ 0.14
SS18-201ENST00000269137 CCDC39Q9UFE4 941 aa15.92■□□□□ 0.14
SS18-201ENST00000269137 RIPK3Q9Y572 518 aa15.92■□□□□ 0.14
SS18-201ENST00000269137 FRMPD4Q14CM0 1322 aa15.92■□□□□ 0.14
SS18-201ENST00000269137 MARCH6O60337 910 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 ZNF76P36508 570 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 STAT3P40763 770 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 RPS6P62753 249 aaKnown RBP15.91■□□□□ 0.14
SS18-201ENST00000269137 SNAPC2Q13487 334 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 PNOCQ13519 176 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 UVSSAQ2YD98 709 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 ANO6Q4KMQ2 910 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 NT5DC1Q5TFE4 455 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 PDXDC2PQ6P474 469 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 CABP7Q86V35 215 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 RNF214Q8ND24 703 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 FAM200AQ8TCP9 573 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 PAGE5Q96GU1 130 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 ZNF408Q9H9D4 720 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 GBA2Q9HCG7 927 aaPredicted RBP15.91■□□□□ 0.14
SS18-201ENST00000269137 COL20A1Q9P218 1284 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 LRWD1Q9UFC0 647 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 PCDHA12Q9UN75 941 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 IGLV3-22A0A075B6J6 115 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 FOXN1O15353 648 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 GJA5P36382 358 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 PABPC4Q13310 644 aaKnown RBP eCLIP15.91■□□□□ 0.14
SS18-201ENST00000269137 KARSQ15046 597 aaKnown RBP15.91■□□□□ 0.14
SS18-201ENST00000269137 ZRSR1Q15695 479 aaKnown RBP15.91■□□□□ 0.14
SS18-201ENST00000269137 RRAGBQ5VZM2 374 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 SPATA20Q8TB22 786 aa15.91■□□□□ 0.14
SS18-201ENST00000269137 MMTAG2Q9BU76 263 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms