RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 GCOM1H8Y6P7 765 aaPredicted RBP13.03□□□□□ -0.32
SCAF11-201ENST00000266589 IKBKBO14920 756 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 POLR2MP0CAP2 368 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 ZNF75DP51815 510 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 CUL4BQ13620 913 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 PDIA5Q14554 519 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 NCAPHQ15003 741 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 HS1BP3Q53T59 392 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 NOL9Q5SY16 702 aaKnown RBP13.03□□□□□ -0.32
SCAF11-201ENST00000266589 SARM1Q6SZW1 724 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 DLK2Q6UY11 383 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 PLA2G4DQ86XP0 818 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 MLKLQ8NB16 471 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.03□□□□□ -0.32
SCAF11-201ENST00000266589 LRRC15Q8TF66 581 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 TBC1D5Q92609 795 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 GJA10Q969M2 543 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 CUEDC2Q9H467 287 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 DACH1Q9UI36 760 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 PPP1R9AQ9ULJ8 1098 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 WDR90Q96KV7 1748 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 TPM4P67936 248 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 MYL5Q02045 173 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 CALML4Q96GE6 196 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 SLC38A10Q9HBR0 1119 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 KCNMB3Q9NPA1 279 aa13.03□□□□□ -0.32
SCAF11-201ENST00000266589 USP2O75604 605 aaPredicted RBP13.02□□□□□ -0.33
SCAF11-201ENST00000266589 HMGCS2P54868 508 aa13.02□□□□□ -0.33
SCAF11-201ENST00000266589 GPR162Q16538 588 aa13.02□□□□□ -0.33
SCAF11-201ENST00000266589 PRR16Q569H4 304 aa13.02□□□□□ -0.33
SCAF11-201ENST00000266589 CPXCR1Q8N123 301 aa13.02□□□□□ -0.33
SCAF11-201ENST00000266589 L3MBTL3Q96JM7 780 aaPredicted RBP13.02□□□□□ -0.33
SCAF11-201ENST00000266589 UIMC1Q96RL1 719 aa13.02□□□□□ -0.33
SCAF11-201ENST00000266589 MAGEF1Q9HAY2 307 aa13.02□□□□□ -0.33
SCAF11-201ENST00000266589 KBTBD4Q9NVX7 518 aa13.02□□□□□ -0.33
SCAF11-201ENST00000266589 PCDHA12Q9UN75 941 aa13.02□□□□□ -0.33
SCAF11-201ENST00000266589 C19orf81C9J6K1 198 aa13.01□□□□□ -0.33
SCAF11-201ENST00000266589 FAM86B1E9PN63 330 aa13.01□□□□□ -0.33
SCAF11-201ENST00000266589 CYP3A4P08684 503 aa13.01□□□□□ -0.33
SCAF11-201ENST00000266589 FAM86B2P0C5J1 330 aa13.01□□□□□ -0.33
SCAF11-201ENST00000266589 CIITAP33076 1130 aa13.01□□□□□ -0.33
SCAF11-201ENST00000266589 Q4G0T1 1027 aa13.01□□□□□ -0.33
SCAF11-201ENST00000266589 KRT79Q5XKE5 535 aa13.01□□□□□ -0.33
SCAF11-201ENST00000266589 SNX29Q8TEQ0 813 aa13.01□□□□□ -0.33
SCAF11-201ENST00000266589 C12orf42Q96LP6 360 aa13.01□□□□□ -0.33
SCAF11-201ENST00000266589 RAVER2Q9HCJ3 691 aaKnown RBP13.01□□□□□ -0.33
SCAF11-201ENST00000266589 RPN1P04843 607 aaKnown RBP13.01□□□□□ -0.33
SCAF11-201ENST00000266589 ZNF76P36508 570 aa13.01□□□□□ -0.33
SCAF11-201ENST00000266589 GRB10Q13322 594 aa13.01□□□□□ -0.33
SCAF11-201ENST00000266589 KRT26Q7Z3Y9 468 aa13.01□□□□□ -0.33
SCAF11-201ENST00000266589 SLFN12Q8IYM2 578 aa13.01□□□□□ -0.33
SCAF11-201ENST00000266589 SPC24Q8NBT2 197 aa13.01□□□□□ -0.33
SCAF11-201ENST00000266589 ETNPPLQ8TBG4 499 aa13.01□□□□□ -0.33
SCAF11-201ENST00000266589 LENG9Q96B70 501 aa13.01□□□□□ -0.33
SCAF11-201ENST00000266589 CDK5RAP3Q96JB5 506 aa13.01□□□□□ -0.33
SCAF11-201ENST00000266589 EHMT1Q9H9B1 1298 aa13.01□□□□□ -0.33
SCAF11-201ENST00000266589 RMND1Q9NWS8 449 aa13.01□□□□□ -0.33
SCAF11-201ENST00000266589 CTDP1Q9Y5B0 961 aaPredicted RBP13.01□□□□□ -0.33
SCAF11-201ENST00000266589 COL11A1P12107 1806 aaPredicted RBP13.01□□□□□ -0.33
SCAF11-201ENST00000266589 RLFQ13129 1914 aa13.01□□□□□ -0.33
SCAF11-201ENST00000266589 TBX3O15119 743 aa13□□□□□ -0.33
SCAF11-201ENST00000266589 MYL1P05976 194 aa13□□□□□ -0.33
SCAF11-201ENST00000266589 ALAS1P13196 640 aa13□□□□□ -0.33
SCAF11-201ENST00000266589 EPHX2P34913 555 aa13□□□□□ -0.33
SCAF11-201ENST00000266589 FMR1Q06787 632 aaKnown RBP eCLIP13□□□□□ -0.336e-11■□□□□ 10.5
SCAF11-201ENST00000266589 VGLL4Q14135 290 aa13□□□□□ -0.33
SCAF11-201ENST00000266589 PPP1R3FQ6ZSY5 799 aaPredicted RBP13□□□□□ -0.33
SCAF11-201ENST00000266589 USP50Q70EL3 339 aaPredicted RBP13□□□□□ -0.33
SCAF11-201ENST00000266589 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13□□□□□ -0.33
SCAF11-201ENST00000266589 PNMA5Q96PV4 448 aa13□□□□□ -0.33
SCAF11-201ENST00000266589 NUDT12Q9BQG2 462 aa13□□□□□ -0.33
SCAF11-201ENST00000266589 HSD3B7Q9H2F3 369 aa13□□□□□ -0.33
SCAF11-201ENST00000266589 ZBTB4Q9P1Z0 1013 aaPredicted RBP13□□□□□ -0.33
SCAF11-201ENST00000266589 AFG3L2Q9Y4W6 797 aa13□□□□□ -0.33
SCAF11-201ENST00000266589 SNCAIPQ9Y6H5 919 aa13□□□□□ -0.33
SCAF11-201ENST00000266589 ESPNB1AK53 854 aa13□□□□□ -0.33
SCAF11-201ENST00000266589 NFIBO00712 420 aa13□□□□□ -0.33
SCAF11-201ENST00000266589 ZBED4O75132 1171 aa13□□□□□ -0.33
SCAF11-201ENST00000266589 HSD17B4P51659 736 aa13□□□□□ -0.33
SCAF11-201ENST00000266589 TRMT44Q8IYL2 757 aaKnown RBP13□□□□□ -0.33
SCAF11-201ENST00000266589 SMYD4Q8IYR2 804 aaPredicted RBP13□□□□□ -0.33
SCAF11-201ENST00000266589 CLEC4DQ8WXI8 215 aa13□□□□□ -0.33
SCAF11-201ENST00000266589 ATG4CQ96DT6 458 aa13□□□□□ -0.33
SCAF11-201ENST00000266589 MRFAP1L1Q96HT8 127 aa13□□□□□ -0.33
SCAF11-201ENST00000266589 HOMER2Q9NSB8 354 aa13□□□□□ -0.33
SCAF11-201ENST00000266589 TMOD4Q9NZQ9 345 aa13□□□□□ -0.33
SCAF11-201ENST00000266589 STK17AQ9UEE5 414 aa13□□□□□ -0.33
SCAF11-201ENST00000266589 PTPRFP10586 1907 aa12.99□□□□□ -0.33
SCAF11-201ENST00000266589 VWA5AO00534 786 aa12.99□□□□□ -0.33
SCAF11-201ENST00000266589 PPP1R12BO60237 982 aaPredicted RBP12.99□□□□□ -0.33
SCAF11-201ENST00000266589 FDX1P10109 184 aa12.99□□□□□ -0.33
SCAF11-201ENST00000266589 CD44P16070 742 aaKnown RBP12.99□□□□□ -0.33
SCAF11-201ENST00000266589 UBXN2AP68543 259 aa12.99□□□□□ -0.33
SCAF11-201ENST00000266589 MAP3K9P80192 1104 aa12.99□□□□□ -0.33
SCAF11-201ENST00000266589 MCF2L2Q86YR7 1114 aa12.99□□□□□ -0.33
SCAF11-201ENST00000266589 DRC7Q8IY82 874 aa12.99□□□□□ -0.33
SCAF11-201ENST00000266589 CYP2W1Q8TAV3 490 aa12.99□□□□□ -0.33
SCAF11-201ENST00000266589 ENOX1Q8TC92 643 aaKnown RBP12.99□□□□□ -0.33
SCAF11-201ENST00000266589 WNK4Q96J92 1243 aa12.99□□□□□ -0.33
SCAF11-201ENST00000266589 BLOC1S4Q9NUP1 217 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms