RNA–Protein interactions for RNA: ENST00000265379.10

COL6A5-201, Transcript of collagen type VI alpha 5 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A5, Length 9,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-201ENST00000265379 ABCB5Q2M3G0 1257 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 C2CD5Q86YS7 1000 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 GPR161Q8N6U8 529 aaKnown RBP9.03□□□□□ -0.96
COL6A5-201ENST00000265379 BBOF1Q8ND07 529 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 CAMTA1Q9Y6Y1 1673 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 TCP1P17987 556 aaKnown RBP9.03□□□□□ -0.96
COL6A5-201ENST00000265379 NEDD1Q8NHV4 660 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 LPAR1Q92633 364 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 MMRN2Q9H8L6 949 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 USP17L3A6NCW0 530 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 USP17L4A6NCW7 530 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 CAMTA2O94983 1202 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 TBC1D8BQ0IIM8 1120 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 USP17L1Q7RTZ2 530 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 GJD4Q96KN9 370 aaPredicted RBP9.03□□□□□ -0.96
COL6A5-201ENST00000265379 KIAA1586Q9HCI6 787 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 TAF12Q16514 161 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 KCNV1Q6PIU1 500 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 CCHCR1Q8TD31 782 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 MAK16Q9BXY0 300 aaKnown RBP9.03□□□□□ -0.96
COL6A5-201ENST00000265379 MED4Q9NPJ6 270 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 HOMER3Q9NSC5 361 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 M0R2C6 588 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 POLR2DO15514 142 aaKnown RBP9.03□□□□□ -0.96
COL6A5-201ENST00000265379 LACTBP83111 547 aaPredicted RBP9.03□□□□□ -0.96
COL6A5-201ENST00000265379 PDCD2Q16342 344 aaPredicted RBP9.03□□□□□ -0.96
COL6A5-201ENST00000265379 VPS52Q8N1B4 723 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 RAB3IPQ96QF0 476 aaPredicted RBP9.03□□□□□ -0.96
COL6A5-201ENST00000265379 PFDN4Q9NQP4 134 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 USP40Q9NVE5 1235 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 BCL9LQ86UU0 1499 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 EEF2P13639 858 aaKnown RBP9.03□□□□□ -0.96
COL6A5-201ENST00000265379 MECOMQ03112 1051 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 PDE4DQ08499 809 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 CACNA2D3Q8IZS8 1091 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 AFAP1L2Q8N4X5 818 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 CACYBPQ9HB71 228 aaKnown RBP9.03□□□□□ -0.96
COL6A5-201ENST00000265379 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.03□□□□□ -0.96
COL6A5-201ENST00000265379 PPIP5K2O43314 1243 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 PTPREP23469 700 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 ZNF658Q5TYW1 1059 aaPredicted RBP9.03□□□□□ -0.96
COL6A5-201ENST00000265379 FAM160B1Q5W0V3 765 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 CABP7Q86V35 215 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 PLCD3Q8N3E9 789 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 LRRC2Q9BYS8 371 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 SAMD15Q9P1V8 674 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 NBPF26B4DH59 902 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 EBAG9O00559 213 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 PRPF6O94906 941 aaKnown RBP9.03□□□□□ -0.96
COL6A5-201ENST00000265379 SFNP31947 248 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 NBPF10Q6P3W6 841 aaKnown RBP9.03□□□□□ -0.96
COL6A5-201ENST00000265379 NBPF15Q8N660 670 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.03□□□□□ -0.96
COL6A5-201ENST00000265379 NACC1Q96RE7 527 aa9.03□□□□□ -0.96
COL6A5-201ENST00000265379 STRN3Q13033 797 aa9.02□□□□□ -0.96
COL6A5-201ENST00000265379 SEPT12Q8IYM1 358 aa9.02□□□□□ -0.96
COL6A5-201ENST00000265379 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.02□□□□□ -0.96
COL6A5-201ENST00000265379 KLHDC4Q8TBB5 520 aa9.02□□□□□ -0.96
COL6A5-201ENST00000265379 LARP4BQ92615 738 aaKnown RBP9.02□□□□□ -0.96
COL6A5-201ENST00000265379 GDPD2Q9HCC8 539 aa9.02□□□□□ -0.96
COL6A5-201ENST00000265379 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.02□□□□□ -0.96
COL6A5-201ENST00000265379 GAS7O60861 476 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 LETM2Q2VYF4 491 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 FOXR2Q6PJQ5 311 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 CPLX4Q7Z7G2 160 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 FBXO11Q86XK2 927 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 APOBEC3FQ8IUX4 373 aaKnown RBP9.02□□□□□ -0.97
COL6A5-201ENST00000265379 PDLIM2Q96JY6 352 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 USP28Q96RU2 1077 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 SELENOSQ9BQE4 189 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 TEKT3Q9BXF9 490 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 NWD2Q9ULI1 1742 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 BCAMP50895 628 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 FKBP3Q00688 224 aaKnown RBP9.02□□□□□ -0.97
COL6A5-201ENST00000265379 BTN2A1Q7KYR7 527 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 IFT20Q8IY31 132 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 OGFRQ9NZT2 677 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 PNMA3Q9UL41 463 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 EFCAB8A8MWE9 144 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 BIN1O00499 593 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 LMNB1P20700 586 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 PLCB3Q01970 1234 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 PICALMQ13492 652 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 SEL1L2Q5TEA6 688 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 QTRT2Q9H974 415 aaKnown RBP9.02□□□□□ -0.97
COL6A5-201ENST00000265379 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.02□□□□□ -0.97
COL6A5-201ENST00000265379 CDC42EP1Q00587 391 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 RASA3Q14644 834 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 FKBP1CQ5VVH2 108 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 HELBQ8NG08 1087 aaPredicted RBP9.02□□□□□ -0.97
COL6A5-201ENST00000265379 OSBP2Q969R2 916 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 TACC3Q9Y6A5 838 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 STAM2O75886 525 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 STRIP1Q5VSL9 837 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 RDM1Q8NG50 284 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 MORC4Q8TE76 937 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 OSBPL5Q9H0X9 879 aaPredicted RBP9.02□□□□□ -0.97
COL6A5-201ENST00000265379 PLCB1Q9NQ66 1216 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 A0A1W2PQC6 194 aa9.02□□□□□ -0.97
COL6A5-201ENST00000265379 AFMP43652 599 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms