RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 ECM1Q16610 540 aa12.49□□□□□ -0.41
MSH3-201ENST00000265081 Q4G0T1 1027 aa12.49□□□□□ -0.41
MSH3-201ENST00000265081 ANKRD20A12PQ8NF67 263 aa12.49□□□□□ -0.41
MSH3-201ENST00000265081 NUP58Q9BVL2 599 aa12.49□□□□□ -0.41
MSH3-201ENST00000265081 A0A0U1RQJ8 604 aa12.49□□□□□ -0.41
MSH3-201ENST00000265081 ENTPD3O75355 529 aa12.49□□□□□ -0.41
MSH3-201ENST00000265081 PICALMQ13492 652 aa12.49□□□□□ -0.41
MSH3-201ENST00000265081 LRRC55Q6ZSA7 311 aa12.49□□□□□ -0.41
MSH3-201ENST00000265081 FAM114A1Q8IWE2 563 aa12.49□□□□□ -0.41
MSH3-201ENST00000265081 ATRIPQ8WXE1 791 aa12.49□□□□□ -0.41
MSH3-201ENST00000265081 LARP4BQ92615 738 aaKnown RBP12.49□□□□□ -0.41
MSH3-201ENST00000265081 DESI2Q9BSY9 194 aa12.49□□□□□ -0.41
MSH3-201ENST00000265081 TTC26A0AVF1 554 aa12.49□□□□□ -0.41
MSH3-201ENST00000265081 DDTLA6NHG4 134 aaPredicted RBP12.49□□□□□ -0.41
MSH3-201ENST00000265081 AP3B2Q13367 1082 aa12.49□□□□□ -0.41
MSH3-201ENST00000265081 JAKMIP3Q5VZ66 844 aa12.49□□□□□ -0.41
MSH3-201ENST00000265081 TTBK2Q6IQ55 1244 aa12.49□□□□□ -0.41
MSH3-201ENST00000265081 HOMER1Q86YM7 354 aa12.49□□□□□ -0.41
MSH3-201ENST00000265081 CALML4Q96GE6 196 aa12.49□□□□□ -0.41
MSH3-201ENST00000265081 LRRC27Q9C0I9 530 aa12.49□□□□□ -0.41
MSH3-201ENST00000265081 PI4KBQ9UBF8 816 aa12.49□□□□□ -0.41
MSH3-201ENST00000265081 SIK3Q9Y2K2 1263 aa12.49□□□□□ -0.41
MSH3-201ENST00000265081 ATP8B1O43520 1251 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 MMP10P09238 476 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 LRRC63Q05C16 580 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 ERCC6LQ2NKX8 1250 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 CLEC10AQ8IUN9 316 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 VPS16Q9H269 839 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 KANSL2Q9H9L4 492 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 EXOC1Q9NV70 894 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 LRWD1Q9UFC0 647 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 MEIS2O14770 477 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 TBX3O15119 743 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 COBLO75128 1261 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 FCER1AP12319 257 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 DOK7Q18PE1 504 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 SV2BQ7L1I2 683 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 ETNPPLQ8TBG4 499 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 KCNQ5Q9NR82 932 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 USP17L10C9JJH3 530 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 ECE2O60344 883 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 PDE4DQ08499 809 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 GLIPR1L2Q4G1C9 344 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 KCTD17Q8N5Z5 321 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 FHOD1Q9Y613 1164 aa12.48□□□□□ -0.41
MSH3-201ENST00000265081 PIK3CDO00329 1044 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 ZSCAN20P17040 1043 aaPredicted RBP12.47□□□□□ -0.41
MSH3-201ENST00000265081 TUBB4BP68371 445 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 UBXN1Q04323 297 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 TMEM266Q2M3C6 531 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 KCNK18Q7Z418 384 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 LENG9Q96B70 501 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 NUDT12Q9BQG2 462 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 TUBGCP2Q9BSJ2 902 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 RAB34Q9BZG1 259 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 KDM3AQ9Y4C1 1321 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 PSMD14O00487 310 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 CIITAP33076 1130 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 MRPL12P52815 198 aaKnown RBP12.47□□□□□ -0.41
MSH3-201ENST00000265081 UTP14CQ5TAP6 766 aaKnown RBP12.47□□□□□ -0.41
MSH3-201ENST00000265081 TMEM179Q6ZVK1 233 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 MSL3Q8N5Y2 521 aaKnown RBP12.47□□□□□ -0.41
MSH3-201ENST00000265081 GPR161Q8N6U8 529 aaKnown RBP12.47□□□□□ -0.41
MSH3-201ENST00000265081 OR8K1Q8NGG5 319 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 CNOT6LQ96LI5 555 aaKnown RBP12.47□□□□□ -0.41
MSH3-201ENST00000265081 P2RX7Q99572 595 aaKnown RBP12.47□□□□□ -0.41
MSH3-201ENST00000265081 DDX25Q9UHL0 483 aaKnown RBP12.47□□□□□ -0.41
MSH3-201ENST00000265081 CYP3A4P08684 503 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 SCNN1DP51172 638 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 GNG11P61952 73 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 HERVK_113P62684 666 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 GRIPAP1Q4V328 841 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 NDUFA10O95299 355 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 EEF2P13639 858 aaKnown RBP12.47□□□□□ -0.41
MSH3-201ENST00000265081 CCDC170Q8IYT3 715 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 RABGGTAQ92696 567 aa12.47□□□□□ -0.41
MSH3-201ENST00000265081 OPLAHO14841 1288 aa12.46□□□□□ -0.41
MSH3-201ENST00000265081 CLCN6P51797 869 aa12.46□□□□□ -0.41
MSH3-201ENST00000265081 QRICH1Q2TAL8 776 aa12.46□□□□□ -0.41
MSH3-201ENST00000265081 CSGALNACT2Q8N6G5 542 aa12.46□□□□□ -0.41
MSH3-201ENST00000265081 MSANTD4Q8NCY6 345 aa12.46□□□□□ -0.41
MSH3-201ENST00000265081 CCDC47Q96A33 483 aaKnown RBP12.46□□□□□ -0.41
MSH3-201ENST00000265081 GPCPD1Q9NPB8 672 aa12.46□□□□□ -0.41
MSH3-201ENST00000265081 ZBED6P86452 979 aa12.46□□□□□ -0.41
MSH3-201ENST00000265081 TRIM47Q96LD4 638 aa12.46□□□□□ -0.41
MSH3-201ENST00000265081 RAB21Q9UL25 225 aa12.46□□□□□ -0.41
MSH3-201ENST00000265081 PCDHAC2Q9Y5I4 1007 aa12.46□□□□□ -0.41
MSH3-201ENST00000265081 NKRFO15226 690 aaKnown RBP eCLIP12.46□□□□□ -0.42
MSH3-201ENST00000265081 KRT9P35527 623 aa12.46□□□□□ -0.42
MSH3-201ENST00000265081 TXKP42681 527 aa12.46□□□□□ -0.42
MSH3-201ENST00000265081 PPP2R3AQ06190 1150 aa12.46□□□□□ -0.42
MSH3-201ENST00000265081 MCM6Q14566 821 aa12.46□□□□□ -0.42
MSH3-201ENST00000265081 UBE2SQ16763 222 aa12.46□□□□□ -0.42
MSH3-201ENST00000265081 CC2D2BQ6DHV5 1058 aa12.46□□□□□ -0.42
MSH3-201ENST00000265081 EDEM3Q9BZQ6 932 aa12.46□□□□□ -0.42
MSH3-201ENST00000265081 NT5C3AQ9H0P0 336 aa12.46□□□□□ -0.42
MSH3-201ENST00000265081 DEFB129Q9H1M3 183 aa12.46□□□□□ -0.42
MSH3-201ENST00000265081 PSTPIP2Q9H939 334 aa12.46□□□□□ -0.42
MSH3-201ENST00000265081 CDC23Q9UJX2 597 aa12.46□□□□□ -0.42
MSH3-201ENST00000265081 MAPK8IP1Q9UQF2 711 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms