RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 SENP1Q9P0U3 644 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 RASGRF2O14827 1237 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 VSNL1P62760 191 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 ZNF827Q17R98 1081 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 SPDL1Q96EA4 605 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 CCT8L2Q96SF2 557 aa12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 ZSCAN10Q96SZ4 725 aaPredicted RBP12.76□□□□□ -0.37
DNMT3A-201ENST00000264709 WDR17Q8IZU2 1322 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 TNFAIP3P21580 790 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 IRAK1P51617 712 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 BLIDQ8IZY5 108 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 TRIM11Q96F44 468 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 SH3GLB2Q9NR46 395 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 ARPP21Q9UBL0 812 aaPredicted RBP12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 PPP1R9AQ9ULJ8 1098 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 PALLDQ8WX93 1383 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 AFAP1L2Q8N4X5 818 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 BICD1Q96G01 975 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 STK38LQ9Y2H1 464 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 LONRF3Q496Y0 759 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 PIP4K2CQ8TBX8 421 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 PSMB7Q99436 277 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 MXD3Q9BW11 206 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 NBPF3Q9H094 633 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 IFT172Q9UG01 1749 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 STXBP3O00186 592 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 CCNT1O60563 726 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 LSP1P33241 339 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 ZC3H6P61129 1189 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 MAML3Q96JK9 1138 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 LARGE1O95461 756 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 SERPING1P05155 500 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 CCNE1P24864 410 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 BYSLQ13895 437 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 FBXO31Q5XUX0 539 aaPredicted RBP12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 TXNDC16Q9P2K2 825 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 LCMT1Q9UIC8 334 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 ENC1O14682 589 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 NAA30Q147X3 362 aaPredicted RBP12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 SLC52A2Q9HAB3 445 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 GSTA2P09210 222 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 OR52Z1P0C646 297 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 ZSCAN29Q8IWY8 852 aaPredicted RBP12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 ST13P4Q8IZP2 240 aaPredicted RBP12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 ADGRB1O14514 1584 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 MAST3O60307 1309 aa12.75□□□□□ -0.37
DNMT3A-201ENST00000264709 MYH7BA7E2Y1 1941 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 SH2B2O14492 632 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 ZMYND12Q9H0C1 365 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 L1RE1Q9UN81 338 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 DCAF17Q5H9S7 520 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 KRT12Q99456 494 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 DRC3Q9H069 523 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 MYO1EQ12965 1108 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 NCAPH2Q6IBW4 605 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 ANKRD2Q9GZV1 360 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 PDE6AP16499 860 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 MAP7D1Q3KQU3 841 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 SGMS1Q86VZ5 419 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 LRRC8CQ8TDW0 803 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 NUF2Q9BZD4 464 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 MAPK13O15264 365 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 GOLPH3LQ9H4A5 285 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 NFU1Q9UMS0 254 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 ALKQ9UM73 1620 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 ZRANB2O95218 330 aaKnown RBP eCLIP12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 ENGASEQ8NFI3 743 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 ATP6V0A4Q9HBG4 840 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 RFX1P22670 979 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 PLAAQ9Y263 795 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 RXRAP19793 462 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 CDC37Q16543 378 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 SAMSN1Q9NSI8 373 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 MYH13Q9UKX3 1938 aa12.74□□□□□ -0.37
DNMT3A-201ENST00000264709 ZPR1O75312 459 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 CHGBP05060 677 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 ANKIB1Q9P2G1 1089 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 COL3A1P02461 1466 aaPredicted RBP12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 MYH9P35579 1960 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 OVOS2A0A0G2JMS6 1433 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 ZNF532Q9HCE3 1301 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 MAP3K7O43318 606 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 GSTA1P08263 222 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 PARP10Q53GL7 1025 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 AGBL2Q5U5Z8 902 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 PLCB3Q01970 1234 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 TMEM60Q9H2L4 133 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 SYNCQ9H7C4 482 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 SNX12Q9UMY4 172 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 PCDHA13Q9Y5I0 950 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 CHD4Q14839 1912 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 IPO5O00410 1097 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 ADD1P35611 737 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 NR1I3Q14994 352 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 MMGT1Q8N4V1 131 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 GABPB2Q8TAK5 448 aaPredicted RBP12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 KCNB1Q14721 858 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 SPATA5Q8NB90 893 aa12.73□□□□□ -0.37
DNMT3A-201ENST00000264709 ZNF526Q8TF50 670 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms