RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 MICALL1Q8N3F8 863 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 SMC6Q96SB8 1091 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 DCP1AQ9NPI6 582 aaPredicted RBP15.36■□□□□ 0.05
CDH3-201ENST00000264012 ST7Q9NRC1 585 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 NRBP2Q9NSY0 501 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 DIP2CQ9Y2E4 1556 aa15.36■□□□□ 0.05
CDH3-201ENST00000264012 GAS8O95995 478 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 MAIP1Q8WWC4 291 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 ATP6V0A1Q93050 837 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 PAGE5Q96GU1 130 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 GAP43P17677 238 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 ADRA2BP18089 450 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 SCARF1Q14162 830 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 BRD3Q15059 726 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 ALX1Q15699 326 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 PTPROQ16827 1216 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 ATG9AQ7Z3C6 839 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 POMGNT1Q8WZA1 660 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 DLC1Q96QB1 1528 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 NDUFAB1O14561 156 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 GTF2A1P52655 376 aaPredicted RBP15.35■□□□□ 0.05
CDH3-201ENST00000264012 RBL2Q08999 1139 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 RASA3Q14644 834 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 SETDB1Q15047 1291 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 MIGA2Q7L4E1 593 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 IPO4Q8TEX9 1081 aaKnown RBP15.35■□□□□ 0.05
CDH3-201ENST00000264012 FEZ2Q9UHY8 353 aaPredicted RBP15.35■□□□□ 0.05
CDH3-201ENST00000264012 HNRNPDLO14979 420 aaKnown RBP15.35■□□□□ 0.05
CDH3-201ENST00000264012 CROCCP2Q86T23 111 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 PPP1R13BQ96KQ4 1090 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 RAB17Q9H0T7 212 aa15.35■□□□□ 0.05
CDH3-201ENST00000264012 EFCAB8A8MWE9 144 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 MEIS1O00470 390 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 CACNB3P54284 484 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 MAN2A1Q16706 1144 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 TTLL6Q8N841 843 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 ENAHQ8N8S7 591 aaPredicted RBP15.34■□□□□ 0.05
CDH3-201ENST00000264012 NACC1Q96RE7 527 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 RWDD2AQ9UIY3 292 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 AFF2P51816 1311 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 STK36Q9NRP7 1315 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 PDE6CP51160 858 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 AOC3Q16853 763 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 TMEM47Q9BQJ4 181 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 KRIT1O00522 736 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 PTPREP23469 700 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 RETREG2Q8NC44 543 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 LY9Q9HBG7 655 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 SH3GLB2Q9NR46 395 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 STK10O94804 968 aaKnown RBP15.34■□□□□ 0.05
CDH3-201ENST00000264012 TNNC2P02585 160 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 CCNE1P24864 410 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 PPFIA1Q13136 1202 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 MTMR3Q13615 1198 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 KCTD2Q14681 263 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 TRIM7Q9C029 511 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 RASSF4Q9H2L5 321 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 RIPOR2Q9Y4F9 1068 aa15.34■□□□□ 0.05
CDH3-201ENST00000264012 MYO3AQ8NEV4 1616 aa15.33■□□□□ 0.05
CDH3-201ENST00000264012 GSG1L2A8MUP6 293 aa15.33■□□□□ 0.05
CDH3-201ENST00000264012 ALDH3A1P30838 453 aa15.33■□□□□ 0.05
CDH3-201ENST00000264012 SUPT20HL1Q3ZLR7 823 aa15.33■□□□□ 0.05
CDH3-201ENST00000264012 TMEM179Q6ZVK1 233 aa15.33■□□□□ 0.05
CDH3-201ENST00000264012 RTKN2Q8IZC4 609 aa15.33■□□□□ 0.05
CDH3-201ENST00000264012 MTA3Q9BTC8 594 aa15.33■□□□□ 0.05
CDH3-201ENST00000264012 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.33■□□□□ 0.05
CDH3-201ENST00000264012 FAM184BQ9ULE4 1060 aa15.33■□□□□ 0.05
CDH3-201ENST00000264012 SLC44A5Q8NCS7 719 aa15.33■□□□□ 0.04
CDH3-201ENST00000264012 ADPGKQ9BRR6 497 aa15.33■□□□□ 0.04
CDH3-201ENST00000264012 ANKFY1Q9P2R3 1169 aa15.33■□□□□ 0.04
CDH3-201ENST00000264012 SERPINA10Q9UK55 444 aa15.33■□□□□ 0.04
CDH3-201ENST00000264012 NEXMIFQ5QGS0 1516 aa15.33■□□□□ 0.04
CDH3-201ENST00000264012 OAS2P29728 719 aaKnown RBP15.33■□□□□ 0.04
CDH3-201ENST00000264012 YARSP54577 528 aaKnown RBP15.33■□□□□ 0.04
CDH3-201ENST00000264012 FAM160B1Q5W0V3 765 aa15.33■□□□□ 0.04
CDH3-201ENST00000264012 RESP18Q5W5W9 173 aa15.33■□□□□ 0.04
CDH3-201ENST00000264012 FAM186BQ8IYM0 893 aa15.33■□□□□ 0.04
CDH3-201ENST00000264012 PROCA1Q8NCQ7 364 aaPredicted RBP15.33■□□□□ 0.04
CDH3-201ENST00000264012 SEPT9Q9UHD8 586 aaPredicted RBP15.33■□□□□ 0.04
CDH3-201ENST00000264012 A6NNZ2 444 aa15.33■□□□□ 0.04
CDH3-201ENST00000264012 NDC80O14777 642 aa15.33■□□□□ 0.04
CDH3-201ENST00000264012 C21orf2O43822 256 aa15.33■□□□□ 0.04
CDH3-201ENST00000264012 TMEM191BP0C7N4 346 aa15.33■□□□□ 0.04
CDH3-201ENST00000264012 PSMC2P35998 433 aaKnown RBP15.33■□□□□ 0.04
CDH3-201ENST00000264012 MYL7Q01449 175 aa15.33■□□□□ 0.04
CDH3-201ENST00000264012 TUBB8Q3ZCM7 444 aa15.33■□□□□ 0.04
CDH3-201ENST00000264012 ANO3Q9BYT9 981 aa15.33■□□□□ 0.04
CDH3-201ENST00000264012 DISC1Q9NRI5 854 aa15.33■□□□□ 0.04
CDH3-201ENST00000264012 INO80Q9ULG1 1556 aaPredicted RBP15.32■□□□□ 0.04
CDH3-201ENST00000264012 NMT2O60551 498 aa15.32■□□□□ 0.04
CDH3-201ENST00000264012 GH2P01242 217 aa15.32■□□□□ 0.04
CDH3-201ENST00000264012 CRKP46108 304 aa15.32■□□□□ 0.04
CDH3-201ENST00000264012 KRT71Q3SY84 523 aa15.32■□□□□ 0.04
CDH3-201ENST00000264012 CIAPIN1Q6FI81 312 aa15.32■□□□□ 0.04
CDH3-201ENST00000264012 CCDC117Q8IWD4 279 aaPredicted RBP15.32■□□□□ 0.04
CDH3-201ENST00000264012 HACE1Q8IYU2 909 aa15.32■□□□□ 0.04
CDH3-201ENST00000264012 BZW2Q9Y6E2 419 aaKnown RBP15.32■□□□□ 0.04
CDH3-201ENST00000264012 RCAN1P53805 252 aa15.32■□□□□ 0.04
CDH3-201ENST00000264012 IRX5P78411 483 aaPredicted RBP15.32■□□□□ 0.04
CDH3-201ENST00000264012 RASSF7Q02833 373 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms