RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 E7EVH7 732 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 CXCR5P32302 372 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 IFFO1Q0D2I5 559 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 GALNT17Q6IS24 598 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 C6orf89Q6UWU4 347 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 RUFY4Q6ZNE9 571 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 SRBD1Q8N5C6 995 aaKnown RBP13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 TCP11L1Q9NUJ3 509 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 FER1L4A9Z1Z3 1794 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 COL18A1P39060 1754 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 C1orf167Q5SNV9 1468 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 CCDC194A0A1B0GVG4 234 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 GCOM1H8Y6P7 765 aaPredicted RBP13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 GLI1P08151 1106 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 FGRP09769 529 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 MYZAPP0CAP1 466 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 ELF1P32519 619 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 HSPA9P38646 679 aaKnown RBP13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 ITGB3BPQ13352 177 aaPredicted RBP13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 BIRC3Q13489 604 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 SNCBQ16143 134 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 CDC37Q16543 378 aaPredicted RBP13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 WLSQ5T9L3 541 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 KLHDC7AQ5VTJ3 777 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 MAATS1Q7Z4T9 603 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 SYNE4Q8N205 404 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 LRRC45Q96CN5 670 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 C7orf25Q9BPX7 421 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 BRIP1Q9BX63 1249 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 PLCB1Q9NQ66 1216 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 PCDHA4Q9UN74 947 aa13.7□□□□□ -0.22
CHMP2B-201ENST00000263780 ALS2Q96Q42 1657 aa13.69□□□□□ -0.22
CHMP2B-201ENST00000263780 MYH13Q9UKX3 1938 aa13.69□□□□□ -0.22
CHMP2B-201ENST00000263780 GMNCA6NCL1 334 aa13.69□□□□□ -0.22
CHMP2B-201ENST00000263780 MAN2A1Q16706 1144 aa13.69□□□□□ -0.22
CHMP2B-201ENST00000263780 HELBQ8NG08 1087 aaPredicted RBP13.69□□□□□ -0.22
CHMP2B-201ENST00000263780 NDST4Q9H3R1 872 aa13.69□□□□□ -0.22
CHMP2B-201ENST00000263780 MMRN2Q9H8L6 949 aa13.69□□□□□ -0.22
CHMP2B-201ENST00000263780 VEZTQ9HBM0 779 aa13.69□□□□□ -0.22
CHMP2B-201ENST00000263780 TMBIM4Q9HC24 238 aa13.69□□□□□ -0.22
CHMP2B-201ENST00000263780 SLC40A1Q9NP59 571 aa13.69□□□□□ -0.22
CHMP2B-201ENST00000263780 SIK3Q9Y2K2 1263 aa13.69□□□□□ -0.22
CHMP2B-201ENST00000263780 DOCK2Q92608 1830 aa13.69□□□□□ -0.22
CHMP2B-201ENST00000263780 PLEKP08567 350 aaPredicted RBP13.69□□□□□ -0.22
CHMP2B-201ENST00000263780 EZRP15311 586 aaKnown RBP13.69□□□□□ -0.22
CHMP2B-201ENST00000263780 CHRNA2Q15822 529 aa13.69□□□□□ -0.22
CHMP2B-201ENST00000263780 RRAGAQ7L523 313 aa13.69□□□□□ -0.22
CHMP2B-201ENST00000263780 BANK1Q8NDB2 785 aa13.69□□□□□ -0.22
CHMP2B-201ENST00000263780 PIK3R5Q8WYR1 880 aa13.69□□□□□ -0.22
CHMP2B-201ENST00000263780 PSMB7Q99436 277 aa13.69□□□□□ -0.22
CHMP2B-201ENST00000263780 KIF13AQ9H1H9 1805 aa13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 CES2O00748 559 aa13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 SLC8A1P32418 973 aa13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 ASIC1P78348 528 aa13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 MRPS25P82663 173 aaKnown RBP13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 HDLBPQ00341 1268 aaKnown RBP13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 CUL1Q13616 776 aa13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 CCDC178Q5BJE1 867 aa13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 CYFIP2Q96F07 1278 aa13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 TRIM9Q9C026 710 aa13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 CD248Q9HCU0 757 aa13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 ODF2LQ9ULJ1 636 aa13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 RBAK-RBAKDNI3L0D1 243 aa13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 FAM153BP0C7A2 387 aa13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 FAM153CQ494X1 144 aa13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 CACNA2D4Q7Z3S7 1137 aa13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 PARP9Q8IXQ6 854 aa13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 SYN2Q92777 582 aaPredicted RBP13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 ZNF622Q969S3 477 aaKnown RBP eCLIP13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 TAF1DQ9H5J8 278 aaPredicted RBP13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 FAM207AQ9NSI2 230 aaPredicted RBP13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 FAM153AQ9UHL3 310 aa13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 PLAAQ9Y263 795 aa13.68□□□□□ -0.22
CHMP2B-201ENST00000263780 BCORQ6W2J9 1755 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 PAPPAQ13219 1627 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 NCK2O43639 380 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 GUCY2FP51841 1108 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 RASSF7Q02833 373 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 MTMR3Q13615 1198 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 SLC9C1Q4G0N8 1177 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 CENPPQ6IPU0 288 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 CABP7Q86V35 215 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 SDR42E1Q8WUS8 393 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 CENPHQ9H3R5 247 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 SMARCAL1Q9NZC9 954 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 MYH2Q9UKX2 1941 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 ORC4O43929 436 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 NT5C2P49902 561 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 SEC24CP53992 1094 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 ASTE1Q2TB18 679 aaPredicted RBP13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 PDXDC1Q6P996 788 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 CASKIN2Q8WXE0 1202 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 TAF4BQ92750 862 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 SGSM3Q96HU1 749 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 KRT12Q99456 494 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 TMOD3Q9NYL9 352 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 ARAP2Q8WZ64 1704 aa13.67□□□□□ -0.22
CHMP2B-201ENST00000263780 COL22A1Q8NFW1 1626 aaPredicted RBP13.66□□□□□ -0.22
CHMP2B-201ENST00000263780 LRRC53A6NM62 1247 aa13.66□□□□□ -0.22
CHMP2B-201ENST00000263780 GNAQP50148 359 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms