RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 CEP95Q96GE4 821 aa10.17□□□□□ -0.78
MSH4-201ENST00000263187 THAP9Q9H5L6 903 aa10.17□□□□□ -0.78
MSH4-201ENST00000263187 RRP15Q9Y3B9 282 aaKnown RBP10.17□□□□□ -0.78
MSH4-201ENST00000263187 MYMKA6NI61 221 aa10.16□□□□□ -0.78
MSH4-201ENST00000263187 PSMD14O00487 310 aa10.16□□□□□ -0.78
MSH4-201ENST00000263187 RASA1P20936 1047 aa10.16□□□□□ -0.78
MSH4-201ENST00000263187 CCNE1P24864 410 aa10.16□□□□□ -0.78
MSH4-201ENST00000263187 NONOQ15233 471 aaKnown RBP eCLIP10.16□□□□□ -0.78
MSH4-201ENST00000263187 KCNK18Q7Z418 384 aa10.16□□□□□ -0.78
MSH4-201ENST00000263187 AMOTL1Q8IY63 956 aa10.16□□□□□ -0.78
MSH4-201ENST00000263187 GOLGA5Q8TBA6 731 aa10.16□□□□□ -0.78
MSH4-201ENST00000263187 GJD4Q96KN9 370 aaPredicted RBP10.16□□□□□ -0.78
MSH4-201ENST00000263187 SELENOOQ9BVL4 669 aa10.16□□□□□ -0.78
MSH4-201ENST00000263187 ARHGAP20Q9P2F6 1191 aa10.16□□□□□ -0.78
MSH4-201ENST00000263187 SEC63Q9UGP8 760 aaKnown RBP10.16□□□□□ -0.78
MSH4-201ENST00000263187 SALL4Q9UJQ4 1053 aa10.16□□□□□ -0.78
MSH4-201ENST00000263187 TRPC5Q9UL62 973 aaPredicted RBP10.16□□□□□ -0.78
MSH4-201ENST00000263187 CACNA1SQ13698 1873 aa10.16□□□□□ -0.78
MSH4-201ENST00000263187 LRRC53A6NM62 1247 aa10.16□□□□□ -0.78
MSH4-201ENST00000263187 FECHP22830 423 aa10.16□□□□□ -0.78
MSH4-201ENST00000263187 BTDP43251 543 aa10.16□□□□□ -0.78
MSH4-201ENST00000263187 MMTAG2Q9BU76 263 aaKnown RBP10.16□□□□□ -0.78
MSH4-201ENST00000263187 FLT1P17948 1338 aa10.16□□□□□ -0.78
MSH4-201ENST00000263187 BCORQ6W2J9 1755 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 NPHP3-ACAD11A0A0J9YXS1 232 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 ZSCAN5CA6NGD5 496 aaPredicted RBP10.15□□□□□ -0.78
MSH4-201ENST00000263187 M0R2N6 131 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 CDK8P49336 464 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 ZBED6P86452 979 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 KCTD16Q68DU8 428 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 LRRC31Q6UY01 552 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 DGKHQ86XP1 1220 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 TEX11Q8IYF3 940 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 SMARCC1Q92922 1105 aaPredicted RBP10.15□□□□□ -0.78
MSH4-201ENST00000263187 GBP3Q9H0R5 595 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 HPCAL4Q9UM19 191 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 CCDC181Q5TID7 509 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 CACNA2D4Q7Z3S7 1137 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 NEK8Q86SG6 692 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 PLCD3Q8N3E9 789 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 IFT81Q8WYA0 676 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 CCDC47Q96A33 483 aaKnown RBP10.15□□□□□ -0.78
MSH4-201ENST00000263187 CALML4Q96GE6 196 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 PYM1Q9BRP8 204 aaKnown RBP10.15□□□□□ -0.78
MSH4-201ENST00000263187 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.15□□□□□ -0.78
MSH4-201ENST00000263187 GOLPH3Q9H4A6 298 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 MYO1AQ9UBC5 1043 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 PCDHA13Q9Y5I0 950 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 DOT1LQ8TEK3 1739 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 DOCK2Q92608 1830 aa10.15□□□□□ -0.78
MSH4-201ENST00000263187 NHSQ6T4R5 1651 aa10.15□□□□□ -0.79
MSH4-201ENST00000263187 TULP2O00295 520 aa10.15□□□□□ -0.79
MSH4-201ENST00000263187 KIF11P52732 1056 aa10.15□□□□□ -0.79
MSH4-201ENST00000263187 CALCRLQ16602 461 aa10.15□□□□□ -0.79
MSH4-201ENST00000263187 TPTE2Q6XPS3 522 aa10.15□□□□□ -0.79
MSH4-201ENST00000263187 SV2BQ7L1I2 683 aa10.15□□□□□ -0.79
MSH4-201ENST00000263187 FGFBP2Q9BYJ0 223 aa10.15□□□□□ -0.79
MSH4-201ENST00000263187 TTYH3Q9C0H2 523 aa10.15□□□□□ -0.79
MSH4-201ENST00000263187 NDST4Q9H3R1 872 aa10.15□□□□□ -0.79
MSH4-201ENST00000263187 CWC15Q9P013 229 aaKnown RBP10.15□□□□□ -0.79
MSH4-201ENST00000263187 ANKRD36CQ5JPF3 1778 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 A0A1W2PQC6 194 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 RIMBP2O15034 1052 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 FTCDO95954 541 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 ECM1Q16610 540 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 TMED8Q6PL24 325 aaPredicted RBP10.14□□□□□ -0.79
MSH4-201ENST00000263187 REXO1Q8N1G1 1221 aaKnown RBP10.14□□□□□ -0.79
MSH4-201ENST00000263187 FAM71BQ8TC56 605 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 AFAP1L1Q8TED9 768 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 SNX29Q8TEQ0 813 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 DHTKD1Q96HY7 919 aaPredicted RBP10.14□□□□□ -0.79
MSH4-201ENST00000263187 CCSER1Q9C0I3 900 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 C6orf50Q9HD87 102 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 PALM3A6NDB9 673 aaPredicted RBP10.14□□□□□ -0.79
MSH4-201ENST00000263187 BAG3O95817 575 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 PCP11498 1178 aaKnown RBP10.14□□□□□ -0.79
MSH4-201ENST00000263187 TAL1P17542 331 aaPredicted RBP10.14□□□□□ -0.79
MSH4-201ENST00000263187 SLC1A4P43007 532 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 MAGEA1P43355 309 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 SNAP25P60880 206 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 GRB10Q13322 594 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 KCNB1Q14721 858 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 SBK1Q52WX2 424 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 TTBK2Q6IQ55 1244 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 POTEAQ6S8J7 498 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 MXD3Q9BW11 206 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 MYH10P35580 1976 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 LRP5O75197 1615 aa10.14□□□□□ -0.79
MSH4-201ENST00000263187 TRAF5O00463 557 aa10.13□□□□□ -0.79
MSH4-201ENST00000263187 TRADDQ15628 312 aa10.13□□□□□ -0.79
MSH4-201ENST00000263187 VWA3BQ502W6 1294 aa10.13□□□□□ -0.79
MSH4-201ENST00000263187 PAPD7Q5XG87 772 aaKnown RBP10.13□□□□□ -0.79
MSH4-201ENST00000263187 SRLQ86TD4 932 aa10.13□□□□□ -0.79
MSH4-201ENST00000263187 ANKRD2Q9GZV1 360 aa10.13□□□□□ -0.79
MSH4-201ENST00000263187 QTRT2Q9H974 415 aaKnown RBP10.13□□□□□ -0.79
MSH4-201ENST00000263187 BICDL2A1A5D9 508 aa10.13□□□□□ -0.79
MSH4-201ENST00000263187 GOLGA6BA6NDN3 693 aa10.13□□□□□ -0.79
MSH4-201ENST00000263187 MPHOSPH10O00566 681 aaKnown RBP10.13□□□□□ -0.79
MSH4-201ENST00000263187 UFL1O94874 794 aa10.13□□□□□ -0.79
MSH4-201ENST00000263187 GNAQP50148 359 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms