RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 EPB41L5Q9HCM4 733 aa14.44□□□□□ -0.1
SNX1-201ENST00000261889 MED4Q9NPJ6 270 aa14.44□□□□□ -0.1
SNX1-201ENST00000261889 CYTH3O43739 400 aa14.44□□□□□ -0.1
SNX1-201ENST00000261889 KIF11P52732 1056 aa14.44□□□□□ -0.1
SNX1-201ENST00000261889 WDR93Q6P2C0 686 aa14.44□□□□□ -0.1
SNX1-201ENST00000261889 TMTC2Q8N394 836 aa14.44□□□□□ -0.1
SNX1-201ENST00000261889 ZIM3Q96PE6 472 aa14.44□□□□□ -0.1
SNX1-201ENST00000261889 KRT12Q99456 494 aa14.44□□□□□ -0.1
SNX1-201ENST00000261889 NUDT12Q9BQG2 462 aa14.44□□□□□ -0.1
SNX1-201ENST00000261889 PLA2G12BQ9BX93 195 aa14.44□□□□□ -0.1
SNX1-201ENST00000261889 CAPN11Q9UMQ6 739 aa14.44□□□□□ -0.1
SNX1-201ENST00000261889 EBAG9O00559 213 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 CYLC1P35663 651 aaPredicted RBP14.43□□□□□ -0.1
SNX1-201ENST00000261889 ATP6V1AP38606 617 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 ITPK1Q13572 414 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 MAATS1Q7Z4T9 603 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 CCDC51Q96ER9 411 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 LRRC4CQ9HCJ2 640 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 PCDHA13Q9Y5I0 950 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 MROH5Q6ZUA9 1318 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 SLC20A2Q08357 652 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 EHHADHQ08426 723 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 TRIM28Q13263 835 aaKnown RBP14.43□□□□□ -0.1
SNX1-201ENST00000261889 HLTFQ14527 1009 aaKnown RBP eCLIP14.43□□□□□ -0.1
SNX1-201ENST00000261889 ERFEQ4G0M1 354 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 INTS5Q6P9B9 1019 aaKnown RBP14.43□□□□□ -0.1
SNX1-201ENST00000261889 PNMA1Q8ND90 353 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 OSBPL9Q96SU4 736 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 DNAJC7Q99615 494 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 FGFBP2Q9BYJ0 223 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 COL4A1P02462 1669 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 RTL9Q8NET4 1388 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 FRMPD2Q68DX3 1309 aaPredicted RBP14.43□□□□□ -0.1
SNX1-201ENST00000261889 NRXN2Q9P2S2 1712 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 SPAG1Q07617 926 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 NAA35Q5VZE5 725 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 CABP7Q86V35 215 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 SEMA6BQ9H3T3 888 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 CD248Q9HCU0 757 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 DCP1AQ9NPI6 582 aaPredicted RBP14.43□□□□□ -0.1
SNX1-201ENST00000261889 TAF1P21675 1872 aa14.43□□□□□ -0.1
SNX1-201ENST00000261889 ITIH6Q6UXX5 1313 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 CNTNAP4Q9C0A0 1308 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 FRMD3A2A2Y4 597 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 LRRC10BA6NIK2 292 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 H7C1D1 291 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 HGSO14964 777 aaPredicted RBP14.42□□□□□ -0.1
SNX1-201ENST00000261889 MIIPQ5JXC2 388 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 C8orf74Q6P047 294 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 POTEDQ86YR6 584 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 MAPKAPK5Q8IW41 473 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 KIAA0895Q8NCT3 520 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 RNPC3Q96LT9 517 aaKnown RBP14.42□□□□□ -0.1
SNX1-201ENST00000261889 AP1M1Q9BXS5 423 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.42□□□□□ -0.13e-11■■■■■ 99.4
SNX1-201ENST00000261889 SMIM23A6NLE4 172 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 MAGEA1P43355 309 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 ACTN3Q08043 901 aaPredicted RBP14.42□□□□□ -0.1
SNX1-201ENST00000261889 EP400NLQ6ZTU2 488 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 CACNA2D4Q7Z3S7 1137 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 IL17RBQ9NRM6 502 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 NPHP3-ACAD11A0A0J9YXS1 232 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 PLSCR1O15162 318 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 COPB2P35606 906 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 KRT83P78385 493 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 NNTQ13423 1086 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 FAM182BQ5T319 152 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 HAUS3Q68CZ6 603 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 RCSD1Q6JBY9 416 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 C4orf32Q8N8J7 132 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 UHMK1Q8TAS1 419 aaKnown RBP14.42□□□□□ -0.1
SNX1-201ENST00000261889 PPM1EQ8WY54 764 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 BCAS3Q9H6U6 928 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 MKNK2Q9HBH9 465 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 SNX12Q9UMY4 172 aa14.42□□□□□ -0.1
SNX1-201ENST00000261889 COL1A1P02452 1464 aaPredicted RBP14.41□□□□□ -0.1
SNX1-201ENST00000261889 LOC102724428A0A0B4J2F2 783 aa14.41□□□□□ -0.1
SNX1-201ENST00000261889 SIK1P57059 783 aa14.41□□□□□ -0.1
SNX1-201ENST00000261889 PAPD7Q5XG87 772 aaKnown RBP14.41□□□□□ -0.1
SNX1-201ENST00000261889 KCNV1Q6PIU1 500 aa14.41□□□□□ -0.1
SNX1-201ENST00000261889 P2RX5Q93086 422 aa14.41□□□□□ -0.1
SNX1-201ENST00000261889 JPH2Q9BR39 696 aaPredicted RBP14.41□□□□□ -0.1
SNX1-201ENST00000261889 PCDHA6Q9UN73 950 aa14.41□□□□□ -0.1
SNX1-201ENST00000261889 PCDHA8Q9Y5H6 950 aa14.41□□□□□ -0.1
SNX1-201ENST00000261889 GRIN2DO15399 1336 aa14.41□□□□□ -0.1
SNX1-201ENST00000261889 HEXIM1O94992 359 aaKnown RBP14.41□□□□□ -0.1
SNX1-201ENST00000261889 TMOD1P28289 359 aa14.41□□□□□ -0.1
SNX1-201ENST00000261889 NAPAP54920 295 aa14.41□□□□□ -0.1
SNX1-201ENST00000261889 PFKFB3Q16875 520 aaPredicted RBP14.41□□□□□ -0.1
SNX1-201ENST00000261889 DDX60Q8IY21 1712 aaKnown RBP14.41□□□□□ -0.1
SNX1-201ENST00000261889 MYH7P12883 1935 aa14.41□□□□□ -0.1
SNX1-201ENST00000261889 MYH6P13533 1939 aa14.41□□□□□ -0.1
SNX1-201ENST00000261889 PDS5AQ29RF7 1337 aaKnown RBP14.41□□□□□ -0.1
SNX1-201ENST00000261889 SRGNP10124 158 aa14.4□□□□□ -0.1
SNX1-201ENST00000261889 GNAT2P19087 354 aa14.4□□□□□ -0.1
SNX1-201ENST00000261889 SLC30A10Q6XR72 485 aa14.4□□□□□ -0.1
SNX1-201ENST00000261889 KCNK18Q7Z418 384 aa14.4□□□□□ -0.1
SNX1-201ENST00000261889 PROM2Q8N271 834 aa14.4□□□□□ -0.1
SNX1-201ENST00000261889 COA7Q96BR5 231 aa14.4□□□□□ -0.1
SNX1-201ENST00000261889 FAM84BQ96KN1 310 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms