RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 WNK3Q9BYP7 1800 aa21.52■■□□□ 1.04
SCARB1-201ENST00000261693 A0A1W2PQJ5 194 aa21.52■■□□□ 1.04
SCARB1-201ENST00000261693 USO1O60763 962 aaKnown RBP21.52■■□□□ 1.04
SCARB1-201ENST00000261693 RASA1P20936 1047 aa21.52■■□□□ 1.04
SCARB1-201ENST00000261693 KRT25Q7Z3Z0 450 aa21.52■■□□□ 1.04
SCARB1-201ENST00000261693 RRP36Q96EU6 259 aaKnown RBP21.52■■□□□ 1.04
SCARB1-201ENST00000261693 TSGA10Q9BZW7 698 aa21.52■■□□□ 1.04
SCARB1-201ENST00000261693 NDST4Q9H3R1 872 aa21.52■■□□□ 1.04
SCARB1-201ENST00000261693 DMGDHQ9UI17 866 aaKnown RBP21.52■■□□□ 1.04
SCARB1-201ENST00000261693 PLAGL2Q9UPG8 496 aa21.52■■□□□ 1.04
SCARB1-201ENST00000261693 TACC1O75410 805 aa21.51■■□□□ 1.03
SCARB1-201ENST00000261693 AMPD3Q01432 767 aa21.51■■□□□ 1.03
SCARB1-201ENST00000261693 VWA3BQ502W6 1294 aa21.51■■□□□ 1.03
SCARB1-201ENST00000261693 SLC10A5Q5PT55 438 aa21.51■■□□□ 1.03
SCARB1-201ENST00000261693 SPTY2D1Q68D10 685 aaPredicted RBP21.51■■□□□ 1.03
SCARB1-201ENST00000261693 RRAGAQ7L523 313 aa21.51■■□□□ 1.03
SCARB1-201ENST00000261693 AMOTL1Q8IY63 956 aa21.51■■□□□ 1.03
SCARB1-201ENST00000261693 TRIM58Q8NG06 486 aa21.51■■□□□ 1.03
SCARB1-201ENST00000261693 SH2D4AQ9H788 454 aa21.51■■□□□ 1.03
SCARB1-201ENST00000261693 SPATA31A1Q5TZJ5 1347 aa21.51■■□□□ 1.03
SCARB1-201ENST00000261693 NCK2O43639 380 aa21.51■■□□□ 1.03
SCARB1-201ENST00000261693 AKR1B10O60218 316 aa21.51■■□□□ 1.03
SCARB1-201ENST00000261693 CDK17Q00537 523 aa21.51■■□□□ 1.03
SCARB1-201ENST00000261693 IQCEQ6IPM2 695 aa21.51■■□□□ 1.03
SCARB1-201ENST00000261693 SND1Q7KZF4 910 aaKnown RBP eCLIP21.51■■□□□ 1.039e-10■■■■□ 25.5
SCARB1-201ENST00000261693 CALML4Q96GE6 196 aa21.51■■□□□ 1.03
SCARB1-201ENST00000261693 GPR101Q96P66 508 aaPredicted RBP21.51■■□□□ 1.03
SCARB1-201ENST00000261693 C6orf50Q9HD87 102 aa21.51■■□□□ 1.03
SCARB1-201ENST00000261693 GOLGA6BA6NDN3 693 aa21.5■■□□□ 1.03
SCARB1-201ENST00000261693 MYMKA6NI61 221 aa21.5■■□□□ 1.03
SCARB1-201ENST00000261693 SEMA3FQ13275 785 aa21.5■■□□□ 1.03
SCARB1-201ENST00000261693 FIGNQ5HY92 759 aa21.5■■□□□ 1.03
SCARB1-201ENST00000261693 TMED8Q6PL24 325 aaPredicted RBP21.5■■□□□ 1.03
SCARB1-201ENST00000261693 ANKIB1Q9P2G1 1089 aa21.5■■□□□ 1.03
SCARB1-201ENST00000261693 SIK3Q9Y2K2 1263 aa21.5■■□□□ 1.03
SCARB1-201ENST00000261693 STRCQ7RTU9 1775 aa21.5■■□□□ 1.03
SCARB1-201ENST00000261693 LRRC53A6NM62 1247 aa21.5■■□□□ 1.03
SCARB1-201ENST00000261693 CENPPQ6IPU0 288 aa21.5■■□□□ 1.03
SCARB1-201ENST00000261693 SV2BQ7L1I2 683 aa21.5■■□□□ 1.03
SCARB1-201ENST00000261693 FNBP4Q8N3X1 1017 aaPredicted RBP21.5■■□□□ 1.03
SCARB1-201ENST00000261693 CCDC155Q8N6L0 562 aa21.5■■□□□ 1.03
SCARB1-201ENST00000261693 PIGSQ96S52 555 aa21.5■■□□□ 1.03
SCARB1-201ENST00000261693 SETDB2Q96T68 719 aa21.5■■□□□ 1.03
SCARB1-201ENST00000261693 UBA5Q9GZZ9 404 aa21.5■■□□□ 1.03
SCARB1-201ENST00000261693 SOGA3Q5TF21 947 aa21.49■■□□□ 1.03
SCARB1-201ENST00000261693 CCDC70Q6NSX1 233 aa21.49■■□□□ 1.03
SCARB1-201ENST00000261693 COL16A1Q07092 1604 aaPredicted RBP21.49■■□□□ 1.03
SCARB1-201ENST00000261693 GRB10Q13322 594 aa21.49■■□□□ 1.03
SCARB1-201ENST00000261693 GLIS3Q8NEA6 775 aa21.49■■□□□ 1.03
SCARB1-201ENST00000261693 SPATA4Q8NEY3 305 aa21.49■■□□□ 1.03
SCARB1-201ENST00000261693 AENQ8WTP8 325 aaKnown RBP21.49■■□□□ 1.03
SCARB1-201ENST00000261693 OSBPL9Q96SU4 736 aa21.49■■□□□ 1.03
SCARB1-201ENST00000261693 BLOC1S4Q9NUP1 217 aa21.49■■□□□ 1.03
SCARB1-201ENST00000261693 SALL4Q9UJQ4 1053 aa21.49■■□□□ 1.03
SCARB1-201ENST00000261693 FAM184BQ9ULE4 1060 aa21.49■■□□□ 1.03
SCARB1-201ENST00000261693 GNA11P29992 359 aa21.48■■□□□ 1.03
SCARB1-201ENST00000261693 LRRC41Q15345 812 aa21.48■■□□□ 1.03
SCARB1-201ENST00000261693 CDCA7Q9BWT1 371 aaPredicted RBP21.48■■□□□ 1.03
SCARB1-201ENST00000261693 SEC63Q9UGP8 760 aaKnown RBP21.48■■□□□ 1.03
SCARB1-201ENST00000261693 MAST2Q6P0Q8 1798 aa21.48■■□□□ 1.03
SCARB1-201ENST00000261693 GFPT1Q06210 699 aaPredicted RBP21.48■■□□□ 1.03
SCARB1-201ENST00000261693 EYA3Q99504 573 aa21.48■■□□□ 1.03
SCARB1-201ENST00000261693 SPZ1Q9BXG8 430 aa21.48■■□□□ 1.03
SCARB1-201ENST00000261693 GOLGA6CA6NDK9 693 aa21.47■■□□□ 1.03
SCARB1-201ENST00000261693 BAG3O95817 575 aa21.47■■□□□ 1.03
SCARB1-201ENST00000261693 GOLGA6DP0CG33 693 aa21.47■■□□□ 1.03
SCARB1-201ENST00000261693 HNRNPH3P31942 346 aaKnown RBP21.47■■□□□ 1.03
SCARB1-201ENST00000261693 MMGT1Q8N4V1 131 aa21.47■■□□□ 1.03
SCARB1-201ENST00000261693 FAM76AQ8TAV0 307 aa21.47■■□□□ 1.03
SCARB1-201ENST00000261693 LZTS2Q9BRK4 669 aa21.47■■□□□ 1.03
SCARB1-201ENST00000261693 RABEP2Q9H5N1 569 aa21.47■■□□□ 1.03
SCARB1-201ENST00000261693 GOLGA6AQ9NYA3 693 aa21.47■■□□□ 1.03
SCARB1-201ENST00000261693 ROBO3Q96MS0 1386 aa21.47■■□□□ 1.03
SCARB1-201ENST00000261693 POTEMA6NI47 508 aa21.47■■□□□ 1.03
SCARB1-201ENST00000261693 BUB1O43683 1085 aa21.47■■□□□ 1.03
SCARB1-201ENST00000261693 CCDC181Q5TID7 509 aa21.47■■□□□ 1.03
SCARB1-201ENST00000261693 REXO1Q8N1G1 1221 aaKnown RBP21.47■■□□□ 1.03
SCARB1-201ENST00000261693 TANGO6Q9C0B7 1094 aa21.47■■□□□ 1.03
SCARB1-201ENST00000261693 PPFIA4O75335 1185 aa21.46■■□□□ 1.03
SCARB1-201ENST00000261693 PPP1R2P41236 205 aa21.46■■□□□ 1.03
SCARB1-201ENST00000261693 RASSF7Q02833 373 aa21.46■■□□□ 1.03
SCARB1-201ENST00000261693 CALCRLQ16602 461 aa21.46■■□□□ 1.03
SCARB1-201ENST00000261693 CDK5RAP3Q96JB5 506 aa21.46■■□□□ 1.03
SCARB1-201ENST00000261693 PNMA5Q96PV4 448 aa21.46■■□□□ 1.03
SCARB1-201ENST00000261693 SLC37A4O43826 429 aa21.46■■□□□ 1.03
SCARB1-201ENST00000261693 MAGEA1P43355 309 aa21.46■■□□□ 1.03
SCARB1-201ENST00000261693 CDK8P49336 464 aa21.46■■□□□ 1.03
SCARB1-201ENST00000261693 DNA2P51530 1060 aa21.46■■□□□ 1.03
SCARB1-201ENST00000261693 NAP1L1P55209 391 aaKnown RBP21.46■■□□□ 1.03
SCARB1-201ENST00000261693 MAN2A1Q16706 1144 aa21.46■■□□□ 1.03
SCARB1-201ENST00000261693 LARP4BQ92615 738 aaKnown RBP21.46■■□□□ 1.03
SCARB1-201ENST00000261693 ALS2CR12Q96Q35 445 aa21.46■■□□□ 1.03
SCARB1-201ENST00000261693 NUDT12Q9BQG2 462 aa21.46■■□□□ 1.03
SCARB1-201ENST00000261693 ROBO1Q9Y6N7 1651 aa21.46■■□□□ 1.03
SCARB1-201ENST00000261693 TDP2O95551 362 aa21.45■■□□□ 1.02
SCARB1-201ENST00000261693 TMC4Q7Z404 712 aa21.45■■□□□ 1.02
SCARB1-201ENST00000261693 NYXQ9GZU5 481 aa21.45■■□□□ 1.02
SCARB1-201ENST00000261693 EHD4Q9H223 541 aa21.45■■□□□ 1.02
SCARB1-201ENST00000261693 FRMPD2Q68DX3 1309 aaPredicted RBP21.45■■□□□ 1.02
SCARB1-201ENST00000261693 USP17L5A8MUK1 530 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms