RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 TRIM47Q96LD4 638 aa18.05■□□□□ 0.48
CCDC90B-201ENST00000260054 FGD4Q96M96 766 aa18.05■□□□□ 0.48
CCDC90B-201ENST00000260054 RMDN3Q96TC7 470 aa18.05■□□□□ 0.48
CCDC90B-201ENST00000260054 FRMPD4Q14CM0 1322 aa18.04■□□□□ 0.48
CCDC90B-201ENST00000260054 SOWAHBA6NEL2 793 aa18.04■□□□□ 0.48
CCDC90B-201ENST00000260054 SLC15A5A6NIM6 579 aa18.04■□□□□ 0.48
CCDC90B-201ENST00000260054 EDIL3O43854 480 aa18.04■□□□□ 0.48
CCDC90B-201ENST00000260054 SREBF1P36956 1147 aa18.04■□□□□ 0.48
CCDC90B-201ENST00000260054 FCGRTP55899 365 aa18.04■□□□□ 0.48
CCDC90B-201ENST00000260054 UBXN2AP68543 259 aa18.04■□□□□ 0.48
CCDC90B-201ENST00000260054 MORN1Q5T089 497 aa18.04■□□□□ 0.48
CCDC90B-201ENST00000260054 MYSM1Q5VVJ2 828 aa18.04■□□□□ 0.48
CCDC90B-201ENST00000260054 CRYGNQ8WXF5 182 aa18.04■□□□□ 0.48
CCDC90B-201ENST00000260054 PXMP2Q9NR77 195 aa18.04■□□□□ 0.48
CCDC90B-201ENST00000260054 DOCK3Q8IZD9 2030 aa18.04■□□□□ 0.48
CCDC90B-201ENST00000260054 ZNFX1Q9P2E3 1918 aaKnown RBP18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 WNT7AO00755 349 aa18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 EIF2AK2P19525 551 aaKnown RBP18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 ZNF792Q3KQV3 632 aa18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 FOXD4L6Q3SYB3 417 aaPredicted RBP18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 FOXD4L3Q6VB84 417 aaPredicted RBP18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 JMYQ8N9B5 988 aa18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 ZNF296Q8WUU4 475 aaPredicted RBP18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 MGAMO43451 1857 aa18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 ZNF236Q9UL36 1845 aa18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 TOB1P50616 345 aaPredicted RBP18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 ARHGAP4P98171 946 aa18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 ARHGEF16Q5VV41 709 aa18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 DNERQ8NFT8 737 aa18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 IL31RAQ8NI17 732 aa18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 CD99L2Q8TCZ2 262 aa18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 NSUN6Q8TEA1 469 aaKnown RBP18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 CHAMP1Q96JM3 812 aa18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 PDCD2LQ9BRP1 358 aa18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 GJD2Q9UKL4 321 aa18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 DDX49Q9Y6V7 483 aaKnown RBP18.03■□□□□ 0.48
CCDC90B-201ENST00000260054 FKTNO75072 461 aa18.02■□□□□ 0.47
CCDC90B-201ENST00000260054 ALDH5A1P51649 535 aaPredicted RBP18.02■□□□□ 0.47
CCDC90B-201ENST00000260054 MAP2K5Q13163 448 aa18.02■□□□□ 0.47
CCDC90B-201ENST00000260054 NBR1Q14596 966 aa18.02■□□□□ 0.47
CCDC90B-201ENST00000260054 KIF22Q14807 665 aa18.02■□□□□ 0.47
CCDC90B-201ENST00000260054 PGM5Q15124 567 aa18.02■□□□□ 0.47
CCDC90B-201ENST00000260054 NEK8Q86SG6 692 aa18.02■□□□□ 0.47
CCDC90B-201ENST00000260054 USP6NLQ92738 828 aa18.02■□□□□ 0.47
CCDC90B-201ENST00000260054 NUDT12Q9BQG2 462 aa18.02■□□□□ 0.47
CCDC90B-201ENST00000260054 EHMT1Q9H9B1 1298 aa18.02■□□□□ 0.47
CCDC90B-201ENST00000260054 MYH7BA7E2Y1 1941 aa18.01■□□□□ 0.47
CCDC90B-201ENST00000260054 ATP2B1P20020 1258 aa18.01■□□□□ 0.47
CCDC90B-201ENST00000260054 RILPL1Q5EBL4 403 aa18.01■□□□□ 0.47
CCDC90B-201ENST00000260054 DPP9Q86TI2 863 aa18.01■□□□□ 0.47
CCDC90B-201ENST00000260054 NPLOC4Q8TAT6 608 aa18.01■□□□□ 0.47
CCDC90B-201ENST00000260054 SOCS4Q8WXH5 440 aa18.01■□□□□ 0.47
CCDC90B-201ENST00000260054 ADD3Q9UEY8 706 aaKnown RBP18.01■□□□□ 0.47
CCDC90B-201ENST00000260054 NR3C2P08235 984 aa18■□□□□ 0.47
CCDC90B-201ENST00000260054 TRAPPC10P48553 1259 aa18■□□□□ 0.47
CCDC90B-201ENST00000260054 LETM2Q2VYF4 491 aa18■□□□□ 0.47
CCDC90B-201ENST00000260054 ZFP91Q96JP5 570 aaPredicted RBP18■□□□□ 0.47
CCDC90B-201ENST00000260054 FTOQ9C0B1 505 aaKnown RBP eCLIP18■□□□□ 0.47
CCDC90B-201ENST00000260054 NOL7Q9UMY1 257 aaKnown RBP18■□□□□ 0.47
CCDC90B-201ENST00000260054 CYP3A4P08684 503 aa17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 EDNRBP24530 442 aa17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 DNM1Q05193 864 aaKnown RBP17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 PCNX4Q63HM2 1172 aa17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 TNPO1Q92973 898 aaKnown RBP17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 ERO1AQ96HE7 468 aa17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 GABRQQ9UN88 632 aa17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 DIS3Q9Y2L1 958 aaKnown RBP17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 PCDHB6Q9Y5E3 794 aa17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 TDP2O95551 362 aa17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 HOXC6P09630 235 aa17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 CYP2B6P20813 491 aa17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 USP11P51784 963 aa17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 MRPS9P82933 396 aaKnown RBP17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 PRKCZQ05513 592 aa17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 TTC38Q5R3I4 469 aa17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 VSIG10LQ86VR7 867 aa17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 MAML3Q96JK9 1138 aa17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 USP28Q96RU2 1077 aa17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 IWS1Q96ST2 819 aa17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 PLXNA1Q9UIW2 1896 aa17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 ATP6V1DQ9Y5K8 247 aa17.99■□□□□ 0.47
CCDC90B-201ENST00000260054 FAM86B1E9PN63 330 aa17.98■□□□□ 0.47
CCDC90B-201ENST00000260054 CCNT1O60563 726 aaKnown RBP17.98■□□□□ 0.47
CCDC90B-201ENST00000260054 FAM86B2P0C5J1 330 aa17.98■□□□□ 0.47
CCDC90B-201ENST00000260054 MYCLP12524 364 aaPredicted RBP17.98■□□□□ 0.47
CCDC90B-201ENST00000260054 CIITAP33076 1130 aa17.98■□□□□ 0.47
CCDC90B-201ENST00000260054 RGS2P41220 211 aa17.98■□□□□ 0.47
CCDC90B-201ENST00000260054 ZNF467Q7Z7K2 595 aaPredicted RBP17.98■□□□□ 0.47
CCDC90B-201ENST00000260054 APBA2Q99767 749 aa17.98■□□□□ 0.47
CCDC90B-201ENST00000260054 SLC5A4Q9NY91 659 aa17.98■□□□□ 0.47
CCDC90B-201ENST00000260054 MYH15Q9Y2K3 1946 aa17.98■□□□□ 0.47
CCDC90B-201ENST00000260054 CCND2P30279 289 aa17.97■□□□□ 0.47
CCDC90B-201ENST00000260054 FLT3LGP49771 235 aa17.97■□□□□ 0.47
CCDC90B-201ENST00000260054 ZNF174Q15697 407 aa17.97■□□□□ 0.47
CCDC90B-201ENST00000260054 CYP2W1Q8TAV3 490 aa17.97■□□□□ 0.47
CCDC90B-201ENST00000260054 MORC4Q8TE76 937 aa17.97■□□□□ 0.47
CCDC90B-201ENST00000260054 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.97■□□□□ 0.47
CCDC90B-201ENST00000260054 RTEL1Q9NZ71 1219 aa17.97■□□□□ 0.47
CCDC90B-201ENST00000260054 TFIP11Q9UBB9 837 aaKnown RBP17.97■□□□□ 0.47
CCDC90B-201ENST00000260054 CLIC4Q9Y696 253 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms