RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 VGLL4Q14135 290 aa21.32■■□□□ 1
TRIM47-201ENST00000254816 NOL9Q5SY16 702 aaKnown RBP21.32■■□□□ 1
TRIM47-201ENST00000254816 RRAGBQ5VZM2 374 aa21.32■■□□□ 1
TRIM47-201ENST00000254816 WNK4Q96J92 1243 aa21.32■■□□□ 1
TRIM47-201ENST00000254816 AK8Q96MA6 479 aa21.32■■□□□ 1
TRIM47-201ENST00000254816 NAT10Q9H0A0 1025 aaKnown RBP21.32■■□□□ 1
TRIM47-201ENST00000254816 PPP1R9AQ9ULJ8 1098 aa21.32■■□□□ 1
TRIM47-201ENST00000254816 GLTPD2A6NH11 291 aa21.31■■□□□ 1
TRIM47-201ENST00000254816 BECN2A8MW95 431 aa21.31■■□□□ 1
TRIM47-201ENST00000254816 FOSP01100 380 aaPredicted RBP21.31■■□□□ 1
TRIM47-201ENST00000254816 GCFC2P16383 781 aaKnown RBP21.31■■□□□ 1
TRIM47-201ENST00000254816 EAPPQ56P03 285 aaPredicted RBP21.31■■□□□ 1
TRIM47-201ENST00000254816 NAALADL2Q58DX5 795 aa21.31■■□□□ 1
TRIM47-201ENST00000254816 NT5DC1Q5TFE4 455 aa21.31■■□□□ 1
TRIM47-201ENST00000254816 USP50Q70EL3 339 aaPredicted RBP21.31■■□□□ 1
TRIM47-201ENST00000254816 MMTAG2Q9BU76 263 aaKnown RBP21.31■■□□□ 1
TRIM47-201ENST00000254816 SNCAIPQ9Y6H5 919 aa21.31■■□□□ 1
TRIM47-201ENST00000254816 ABCB11O95342 1321 aa21.31■■□□□ 1
TRIM47-201ENST00000254816 GOLGA6L19H0YKK7 550 aa21.31■■□□□ 1
TRIM47-201ENST00000254816 GCOM1H8Y6P7 765 aaPredicted RBP21.31■■□□□ 1
TRIM47-201ENST00000254816 MARCH6O60337 910 aa21.31■■□□□ 1
TRIM47-201ENST00000254816 POLR2MP0CAP2 368 aa21.31■■□□□ 1
TRIM47-201ENST00000254816 SREBF1P36956 1147 aa21.31■■□□□ 1
TRIM47-201ENST00000254816 CNKSR2Q8WXI2 1034 aa21.31■■□□□ 1
TRIM47-201ENST00000254816 SLC38A10Q9HBR0 1119 aa21.31■■□□□ 1
TRIM47-201ENST00000254816 LRWD1Q9UFC0 647 aa21.31■■□□□ 1
TRIM47-201ENST00000254816 AFG3L2Q9Y4W6 797 aa21.31■■□□□ 1
TRIM47-201ENST00000254816 SCN4AP35499 1836 aa21.31■■□□□ 1
TRIM47-201ENST00000254816 FXR2P51116 673 aaKnown RBP eCLIP21.3■■□□□ 1
TRIM47-201ENST00000254816 UBXN2AP68543 259 aa21.3■■□□□ 1
TRIM47-201ENST00000254816 DPYDQ12882 1025 aa21.3■■□□□ 1
TRIM47-201ENST00000254816 TMEM266Q2M3C6 531 aa21.3■■□□□ 1
TRIM47-201ENST00000254816 MOB2Q70IA6 237 aa21.3■■□□□ 1
TRIM47-201ENST00000254816 CCDC34Q96HJ3 373 aa21.3■■□□□ 1
TRIM47-201ENST00000254816 PYM1Q9BRP8 204 aaKnown RBP21.3■■□□□ 1
TRIM47-201ENST00000254816 PLCG1P19174 1290 aa21.3■■□□□ 1
TRIM47-201ENST00000254816 MAP3K9P80192 1104 aa21.3■■□□□ 1
TRIM47-201ENST00000254816 CUL4BQ13620 913 aa21.3■■□□□ 1
TRIM47-201ENST00000254816 PRR16Q569H4 304 aa21.3■■□□□ 1
TRIM47-201ENST00000254816 MCTP2Q6DN12 878 aa21.3■■□□□ 1
TRIM47-201ENST00000254816 SPATA20Q8TB22 786 aa21.3■■□□□ 1
TRIM47-201ENST00000254816 ATG4CQ96DT6 458 aa21.3■■□□□ 1
TRIM47-201ENST00000254816 KCNF1Q9H3M0 494 aa21.3■■□□□ 1
TRIM47-201ENST00000254816 HOMER2Q9NSB8 354 aa21.3■■□□□ 1
TRIM47-201ENST00000254816 CYP3A7-CYP3A51PA0A087WV96 503 aa21.29■■□□□ 1
TRIM47-201ENST00000254816 FAM86B1E9PN63 330 aa21.29■■□□□ 1
TRIM47-201ENST00000254816 TPM2P07951 284 aa21.29■■□□□ 1
TRIM47-201ENST00000254816 FAM86B2P0C5J1 330 aa21.29■■□□□ 1
TRIM47-201ENST00000254816 ALAS1P13196 640 aa21.29■■□□□ 1
TRIM47-201ENST00000254816 CYP3A7P24462 503 aa21.29■■□□□ 1
TRIM47-201ENST00000254816 CDCA5Q96FF9 252 aa21.29■■□□□ 1
TRIM47-201ENST00000254816 NAP1L4Q99733 375 aaKnown RBP21.29■■□□□ 1
TRIM47-201ENST00000254816 RBBP6Q7Z6E9 1792 aaKnown RBP21.29■■□□□ 1
TRIM47-201ENST00000254816 NFIBO00712 420 aa21.29■■□□□ 1
TRIM47-201ENST00000254816 PPP1R12BO60237 982 aaPredicted RBP21.29■■□□□ 1
TRIM47-201ENST00000254816 MORC3Q14149 939 aa21.29■■□□□ 1
TRIM47-201ENST00000254816 CYP2W1Q8TAV3 490 aa21.29■■□□□ 1
TRIM47-201ENST00000254816 MBOAT7Q96N66 472 aa21.29■■□□□ 1
TRIM47-201ENST00000254816 NUDT12Q9BQG2 462 aa21.29■■□□□ 1
TRIM47-201ENST00000254816 C19orf81C9J6K1 198 aa21.28■■□□□ 1
TRIM47-201ENST00000254816 SMC2O95347 1197 aa21.28■■□□□ 1
TRIM47-201ENST00000254816 ZFP91Q96JP5 570 aaPredicted RBP21.28■■□□□ 1
TRIM47-201ENST00000254816 C12orf42Q96LP6 360 aa21.28■■□□□ 1
TRIM47-201ENST00000254816 BPIFA3Q9BQP9 254 aa21.28■■□□□ 1
TRIM47-201ENST00000254816 PCDHA12Q9UN75 941 aa21.28■■□□□ 1
TRIM47-201ENST00000254816 POTECB2RU33 542 aa21.27■■□□□ 1
TRIM47-201ENST00000254816 GRIN3BO60391 1043 aa21.27■■□□□ 1
TRIM47-201ENST00000254816 MUM1L1Q5H9M0 696 aa21.27■■□□□ 1
TRIM47-201ENST00000254816 CLEC4DQ8WXI8 215 aa21.27■■□□□ 1
TRIM47-201ENST00000254816 KCNMB3Q9NPA1 279 aa21.27■■□□□ 1
TRIM47-201ENST00000254816 CTDP1Q9Y5B0 961 aaPredicted RBP21.27■■□□□ 1
TRIM47-201ENST00000254816 MOXD1Q6UVY6 613 aa21.27■■□□□ 1
TRIM47-201ENST00000254816 LENG9Q96B70 501 aa21.27■■□□□ 1
TRIM47-201ENST00000254816 TAF1DQ9H5J8 278 aaPredicted RBP21.27■■□□□ 1
TRIM47-201ENST00000254816 TMOD4Q9NZQ9 345 aa21.27■■□□□ 1
TRIM47-201ENST00000254816 VWA5AO00534 786 aa21.26■□□□□ 0.99
TRIM47-201ENST00000254816 ZBED4O75132 1171 aa21.26■□□□□ 0.99
TRIM47-201ENST00000254816 ZNF76P36508 570 aa21.26■□□□□ 0.99
TRIM47-201ENST00000254816 PDIA5Q14554 519 aa21.26■□□□□ 0.99
TRIM47-201ENST00000254816 NOLC1Q14978 699 aaKnown RBP eCLIP21.26■□□□□ 0.99
TRIM47-201ENST00000254816 TRIM5Q9C035 493 aa21.26■□□□□ 0.99
TRIM47-201ENST00000254816 ELP3Q9H9T3 547 aa21.26■□□□□ 0.99
TRIM47-201ENST00000254816 CSADQ9Y600 493 aa21.26■□□□□ 0.99
TRIM47-201ENST00000254816 GTPBP6O43824 516 aaPredicted RBP21.26■□□□□ 0.99
TRIM47-201ENST00000254816 GRB10Q13322 594 aa21.26■□□□□ 0.99
TRIM47-201ENST00000254816 CLMNQ96JQ2 1002 aa21.26■□□□□ 0.99
TRIM47-201ENST00000254816 RAB34Q9BZG1 259 aa21.26■□□□□ 0.99
TRIM47-201ENST00000254816 COL20A1Q9P218 1284 aa21.26■□□□□ 0.99
TRIM47-201ENST00000254816 PYCARDQ9ULZ3 195 aa21.26■□□□□ 0.99
TRIM47-201ENST00000254816 PTGS1P23219 599 aa21.25■□□□□ 0.99
TRIM47-201ENST00000254816 TTLL12Q14166 644 aaPredicted RBP21.25■□□□□ 0.99
TRIM47-201ENST00000254816 NCAPHQ15003 741 aa21.25■□□□□ 0.99
TRIM47-201ENST00000254816 Q4G0T1 1027 aa21.25■□□□□ 0.99
TRIM47-201ENST00000254816 ETNPPLQ8TBG4 499 aa21.25■□□□□ 0.99
TRIM47-201ENST00000254816 SNX29Q8TEQ0 813 aa21.25■□□□□ 0.99
TRIM47-201ENST00000254816 ZC3H15Q8WU90 426 aaKnown RBP21.25■□□□□ 0.99
TRIM47-201ENST00000254816 CALML4Q96GE6 196 aa21.25■□□□□ 0.99
TRIM47-201ENST00000254816 PNMA5Q96PV4 448 aa21.25■□□□□ 0.99
TRIM47-201ENST00000254816 CYP3A4P08684 503 aa21.25■□□□□ 0.99
TRIM47-201ENST00000254816 STAT3P40763 770 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms