RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 ADD1P35611 737 aaKnown RBP20.74■□□□□ 0.91
SNRPA1-201ENST00000254193 GJA9P57773 515 aa20.74■□□□□ 0.91
SNRPA1-201ENST00000254193 FCHSD1Q86WN1 690 aa20.74■□□□□ 0.91
SNRPA1-201ENST00000254193 C7orf61Q8IZ16 206 aa20.74■□□□□ 0.91
SNRPA1-201ENST00000254193 WDR11Q9BZH6 1224 aa20.74■□□□□ 0.91
SNRPA1-201ENST00000254193 UPF3AQ9H1J1 476 aaKnown RBP20.74■□□□□ 0.91
SNRPA1-201ENST00000254193 SPC25Q9HBM1 224 aa20.74■□□□□ 0.91
SNRPA1-201ENST00000254193 PXMP2Q9NR77 195 aa20.74■□□□□ 0.91
SNRPA1-201ENST00000254193 MAP3K20Q9NYL2 800 aaKnown RBP20.74■□□□□ 0.91
SNRPA1-201ENST00000254193 V9GY48 417 aaPredicted RBP20.74■□□□□ 0.91
SNRPA1-201ENST00000254193 RBM47A0AV96 593 aaKnown RBP20.73■□□□□ 0.91
SNRPA1-201ENST00000254193 CTAGE5O15320 804 aa20.73■□□□□ 0.91
SNRPA1-201ENST00000254193 DYNC1LI2O43237 492 aaPredicted RBP20.73■□□□□ 0.91
SNRPA1-201ENST00000254193 TOB2Q14106 344 aaPredicted RBP20.73■□□□□ 0.91
SNRPA1-201ENST00000254193 KCNA10Q16322 511 aa20.73■□□□□ 0.91
SNRPA1-201ENST00000254193 CCSAPQ6IQ19 270 aaPredicted RBP20.73■□□□□ 0.91
SNRPA1-201ENST00000254193 HEATR3Q7Z4Q2 680 aa20.73■□□□□ 0.91
SNRPA1-201ENST00000254193 TLK2Q86UE8 772 aa20.73■□□□□ 0.91
SNRPA1-201ENST00000254193 SAMD3Q8N6K7 520 aa20.73■□□□□ 0.91
SNRPA1-201ENST00000254193 GPKOWQ92917 476 aaPredicted RBP eCLIP20.73■□□□□ 0.914e-9■■■□□ 16.8
SNRPA1-201ENST00000254193 IWS1Q96ST2 819 aa20.73■□□□□ 0.91
SNRPA1-201ENST00000254193 LARP6Q9BRS8 491 aaKnown RBP20.73■□□□□ 0.91
SNRPA1-201ENST00000254193 NR3C2P08235 984 aa20.72■□□□□ 0.91
SNRPA1-201ENST00000254193 ACLYP53396 1101 aa20.72■□□□□ 0.91
SNRPA1-201ENST00000254193 BEX3Q00994 111 aa20.72■□□□□ 0.91
SNRPA1-201ENST00000254193 STXBP2Q15833 593 aa20.72■□□□□ 0.91
SNRPA1-201ENST00000254193 DUSP28Q4G0W2 176 aa20.72■□□□□ 0.91
SNRPA1-201ENST00000254193 GNASQ5JWF2 1037 aa20.72■□□□□ 0.91
SNRPA1-201ENST00000254193 USP17L6PQ6QN14 398 aa20.72■□□□□ 0.91
SNRPA1-201ENST00000254193 SEPT14Q6ZU15 432 aa20.72■□□□□ 0.91
SNRPA1-201ENST00000254193 PDCD2LQ9BRP1 358 aa20.72■□□□□ 0.91
SNRPA1-201ENST00000254193 TSEN34Q9BSV6 310 aaKnown RBP20.72■□□□□ 0.91
SNRPA1-201ENST00000254193 AP5M1Q9H0R1 490 aa20.72■□□□□ 0.91
SNRPA1-201ENST00000254193 PDRG1Q9NUG6 133 aa20.72■□□□□ 0.91
SNRPA1-201ENST00000254193 CCDC196A0A1B0GTZ2 297 aa20.71■□□□□ 0.91
SNRPA1-201ENST00000254193 A0A1W2PQ45 241 aaPredicted RBP20.71■□□□□ 0.91
SNRPA1-201ENST00000254193 A0A1W2PQY0 241 aa20.71■□□□□ 0.91
SNRPA1-201ENST00000254193 MYCLP12524 364 aaPredicted RBP20.71■□□□□ 0.91
SNRPA1-201ENST00000254193 CST5P28325 142 aaPredicted RBP20.71■□□□□ 0.91
SNRPA1-201ENST00000254193 PDIA3P30101 505 aaKnown RBP20.71■□□□□ 0.91
SNRPA1-201ENST00000254193 EVCP57679 992 aa20.71■□□□□ 0.91
SNRPA1-201ENST00000254193 PPP2R5BQ15173 497 aa20.71■□□□□ 0.91
SNRPA1-201ENST00000254193 SLC39A5Q6ZMH5 540 aa20.71■□□□□ 0.91
SNRPA1-201ENST00000254193 PIAS4Q8N2W9 510 aaPredicted RBP20.71■□□□□ 0.91
SNRPA1-201ENST00000254193 IL31RAQ8NI17 732 aa20.71■□□□□ 0.91
SNRPA1-201ENST00000254193 SCFD2Q8WU76 684 aa20.71■□□□□ 0.91
SNRPA1-201ENST00000254193 MEIS2O14770 477 aa20.7■□□□□ 0.9
SNRPA1-201ENST00000254193 EIF5BO60841 1220 aaKnown RBP20.7■□□□□ 0.9
SNRPA1-201ENST00000254193 ARIH2O95376 493 aa20.7■□□□□ 0.9
SNRPA1-201ENST00000254193 ANAPC15P60006 121 aa20.7■□□□□ 0.9
SNRPA1-201ENST00000254193 NKX3-2P78367 333 aa20.7■□□□□ 0.9
SNRPA1-201ENST00000254193 CCT2P78371 535 aaKnown RBP20.7■□□□□ 0.9
SNRPA1-201ENST00000254193 FSCN1Q16658 493 aaKnown RBP20.7■□□□□ 0.9
SNRPA1-201ENST00000254193 WWC2Q6AWC2 1192 aa20.7■□□□□ 0.9
SNRPA1-201ENST00000254193 PCSK9Q8NBP7 692 aaKnown RBP20.7■□□□□ 0.9
SNRPA1-201ENST00000254193 SMARCC2Q8TAQ2 1214 aa20.7■□□□□ 0.9
SNRPA1-201ENST00000254193 CUL5Q93034 780 aa20.7■□□□□ 0.9
SNRPA1-201ENST00000254193 PSTPIP2Q9H939 334 aa20.7■□□□□ 0.9
SNRPA1-201ENST00000254193 NCOA5Q9HCD5 579 aaKnown RBP20.7■□□□□ 0.9
SNRPA1-201ENST00000254193 ZMYND8Q9ULU4 1186 aaPredicted RBP20.7■□□□□ 0.9
SNRPA1-201ENST00000254193 Q9Y3F1 56 aa20.7■□□□□ 0.9
SNRPA1-201ENST00000254193 BAZ2BQ9UIF8 2168 aaKnown RBP20.7■□□□□ 0.9
SNRPA1-201ENST00000254193 MOXD2PA6NHM9 499 aa20.69■□□□□ 0.9
SNRPA1-201ENST00000254193 PPFIA3O75145 1194 aa20.69■□□□□ 0.9
SNRPA1-201ENST00000254193 EIF3JO75822 258 aaKnown RBP20.69■□□□□ 0.9
SNRPA1-201ENST00000254193 ASGR1P07306 291 aa20.69■□□□□ 0.9
SNRPA1-201ENST00000254193 TXNP10599 105 aaKnown RBP20.69■□□□□ 0.9
SNRPA1-201ENST00000254193 RTP1P59025 263 aa20.69■□□□□ 0.9
SNRPA1-201ENST00000254193 PGM5Q15124 567 aa20.69■□□□□ 0.9
SNRPA1-201ENST00000254193 C8orf34Q49A92 452 aa20.69■□□□□ 0.9
SNRPA1-201ENST00000254193 VSIG10LQ86VR7 867 aa20.69■□□□□ 0.9
SNRPA1-201ENST00000254193 COPS5Q92905 334 aa20.69■□□□□ 0.9
SNRPA1-201ENST00000254193 ZFP91Q96JP5 570 aaPredicted RBP20.69■□□□□ 0.9
SNRPA1-201ENST00000254193 PCDH10Q9P2E7 1040 aa20.69■□□□□ 0.9
SNRPA1-201ENST00000254193 ATP11BQ9Y2G3 1177 aa20.69■□□□□ 0.9
SNRPA1-201ENST00000254193 LCTP09848 1927 aa20.68■□□□□ 0.9
SNRPA1-201ENST00000254193 SYN1P17600 705 aa20.68■□□□□ 0.9
SNRPA1-201ENST00000254193 TTLL4Q14679 1199 aa20.68■□□□□ 0.9
SNRPA1-201ENST00000254193 TRIM60Q495X7 471 aa20.68■□□□□ 0.9
SNRPA1-201ENST00000254193 TYW1BQ6NUM6 668 aa20.68■□□□□ 0.9
SNRPA1-201ENST00000254193 CCDC62Q6P9F0 684 aa20.68■□□□□ 0.9
SNRPA1-201ENST00000254193 NID2Q14112 1375 aa20.68■□□□□ 0.9
SNRPA1-201ENST00000254193 PIK3CDO00329 1044 aa20.67■□□□□ 0.9
SNRPA1-201ENST00000254193 NAPAP54920 295 aa20.67■□□□□ 0.9
SNRPA1-201ENST00000254193 SNX17Q15036 470 aa20.67■□□□□ 0.9
SNRPA1-201ENST00000254193 NTRK3Q16288 839 aa20.67■□□□□ 0.9
SNRPA1-201ENST00000254193 UBE2SQ16763 222 aa20.67■□□□□ 0.9
SNRPA1-201ENST00000254193 LY6KQ17RY6 165 aa20.67■□□□□ 0.9
SNRPA1-201ENST00000254193 CXCL17Q6UXB2 119 aa20.67■□□□□ 0.9
SNRPA1-201ENST00000254193 OR6J1Q8NGC5 347 aa20.67■□□□□ 0.9
SNRPA1-201ENST00000254193 PHKBQ93100 1093 aa20.67■□□□□ 0.9
SNRPA1-201ENST00000254193 VTI1AQ96AJ9 217 aa20.67■□□□□ 0.9
SNRPA1-201ENST00000254193 STARD7Q9NQZ5 370 aa20.67■□□□□ 0.9
SNRPA1-201ENST00000254193 STXBP3O00186 592 aa20.66■□□□□ 0.9
SNRPA1-201ENST00000254193 NKRFO15226 690 aaKnown RBP eCLIP20.66■□□□□ 0.9
SNRPA1-201ENST00000254193 RGS20O76081 388 aa20.66■□□□□ 0.9
SNRPA1-201ENST00000254193 CCND2P30279 289 aa20.66■□□□□ 0.9
SNRPA1-201ENST00000254193 STK3Q13188 491 aa20.66■□□□□ 0.9
SNRPA1-201ENST00000254193 IL17RAQ96F46 866 aa20.66■□□□□ 0.9
SNRPA1-201ENST00000254193 ZNF274Q96GC6 653 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms