RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 RBM47A0AV96 593 aaKnown RBP16.43■□□□□ 0.22
CNN1-201ENST00000252456 MYADML2A6NDP7 307 aa16.43■□□□□ 0.22
CNN1-201ENST00000252456 GCOM1H8Y6P7 765 aaPredicted RBP16.43■□□□□ 0.22
CNN1-201ENST00000252456 MEIS2O14770 477 aa16.43■□□□□ 0.22
CNN1-201ENST00000252456 EIF5BO60841 1220 aaKnown RBP16.43■□□□□ 0.22
CNN1-201ENST00000252456 POLR2MP0CAP2 368 aa16.43■□□□□ 0.22
CNN1-201ENST00000252456 SMPD1P17405 629 aa16.43■□□□□ 0.22
CNN1-201ENST00000252456 PDE4DQ08499 809 aa16.43■□□□□ 0.22
CNN1-201ENST00000252456 WWC2Q6AWC2 1192 aa16.43■□□□□ 0.22
CNN1-201ENST00000252456 CCSAPQ6IQ19 270 aaPredicted RBP16.43■□□□□ 0.22
CNN1-201ENST00000252456 KLHDC9Q8NEP7 349 aa16.43■□□□□ 0.22
CNN1-201ENST00000252456 UPF3AQ9H1J1 476 aaKnown RBP16.43■□□□□ 0.22
CNN1-201ENST00000252456 NCOA5Q9HCD5 579 aaKnown RBP16.43■□□□□ 0.22
CNN1-201ENST00000252456 PDRG1Q9NUG6 133 aa16.43■□□□□ 0.22
CNN1-201ENST00000252456 EIF2AK2P19525 551 aaKnown RBP16.42■□□□□ 0.22
CNN1-201ENST00000252456 NKX3-2P78367 333 aa16.42■□□□□ 0.22
CNN1-201ENST00000252456 TNFAIP2Q03169 654 aa16.42■□□□□ 0.22
CNN1-201ENST00000252456 IL31RAQ8NI17 732 aa16.42■□□□□ 0.22
CNN1-201ENST00000252456 IWS1Q96ST2 819 aa16.42■□□□□ 0.22
CNN1-201ENST00000252456 ALDH8A1Q9H2A2 487 aaPredicted RBP16.42■□□□□ 0.22
CNN1-201ENST00000252456 V9GY48 417 aaPredicted RBP16.42■□□□□ 0.22
CNN1-201ENST00000252456 FRMPD4Q14CM0 1322 aa16.42■□□□□ 0.22
CNN1-201ENST00000252456 CCDC196A0A1B0GTZ2 297 aa16.41■□□□□ 0.22
CNN1-201ENST00000252456 PIK3CDO00329 1044 aa16.41■□□□□ 0.22
CNN1-201ENST00000252456 GJA9P57773 515 aa16.41■□□□□ 0.22
CNN1-201ENST00000252456 IQSEC1Q6DN90 963 aa16.41■□□□□ 0.22
CNN1-201ENST00000252456 USP17L6PQ6QN14 398 aa16.41■□□□□ 0.22
CNN1-201ENST00000252456 HEATR3Q7Z4Q2 680 aa16.41■□□□□ 0.22
CNN1-201ENST00000252456 ZNF274Q96GC6 653 aaPredicted RBP16.41■□□□□ 0.22
CNN1-201ENST00000252456 PDCD2LQ9BRP1 358 aa16.41■□□□□ 0.22
CNN1-201ENST00000252456 HTATIP2Q9BUP3 242 aa16.41■□□□□ 0.22
CNN1-201ENST00000252456 RANBP2P49792 3224 aaKnown RBP16.41■□□□□ 0.22
CNN1-201ENST00000252456 MYCNP04198 464 aaPredicted RBP16.41■□□□□ 0.22
CNN1-201ENST00000252456 NR3C2P08235 984 aa16.41■□□□□ 0.22
CNN1-201ENST00000252456 CST5P28325 142 aaPredicted RBP16.41■□□□□ 0.22
CNN1-201ENST00000252456 CCT2P78371 535 aaKnown RBP16.41■□□□□ 0.22
CNN1-201ENST00000252456 ARHGEF16Q5VV41 709 aa16.41■□□□□ 0.22
CNN1-201ENST00000252456 FCHSD1Q86WN1 690 aa16.41■□□□□ 0.22
CNN1-201ENST00000252456 PHKBQ93100 1093 aa16.41■□□□□ 0.22
CNN1-201ENST00000252456 MPHOSPH6Q99547 160 aaKnown RBP16.41■□□□□ 0.22
CNN1-201ENST00000252456 SENP6Q9GZR1 1112 aaPredicted RBP16.41■□□□□ 0.22
CNN1-201ENST00000252456 PHF24Q9UPV7 400 aa16.41■□□□□ 0.22
CNN1-201ENST00000252456 KBTBD13C9JR72 458 aa16.4■□□□□ 0.22
CNN1-201ENST00000252456 STXBP3O00186 592 aa16.4■□□□□ 0.22
CNN1-201ENST00000252456 PPFIA3O75145 1194 aa16.4■□□□□ 0.22
CNN1-201ENST00000252456 ARIH2O95376 493 aa16.4■□□□□ 0.22
CNN1-201ENST00000252456 PGM5Q15124 567 aa16.4■□□□□ 0.22
CNN1-201ENST00000252456 PKN1Q16512 942 aa16.4■□□□□ 0.22
CNN1-201ENST00000252456 LRRC26Q2I0M4 334 aa16.4■□□□□ 0.22
CNN1-201ENST00000252456 DUSP28Q4G0W2 176 aa16.4■□□□□ 0.22
CNN1-201ENST00000252456 RNF180Q86T96 592 aa16.4■□□□□ 0.22
CNN1-201ENST00000252456 TLK2Q86UE8 772 aa16.4■□□□□ 0.22
CNN1-201ENST00000252456 KIF2CQ99661 725 aa16.4■□□□□ 0.22
CNN1-201ENST00000252456 WDR11Q9BZH6 1224 aa16.4■□□□□ 0.22
CNN1-201ENST00000252456 TPCN1Q9ULQ1 816 aa16.4■□□□□ 0.22
CNN1-201ENST00000252456 B4DLN1 442 aa16.39■□□□□ 0.21
CNN1-201ENST00000252456 RGS20O76081 388 aa16.39■□□□□ 0.21
CNN1-201ENST00000252456 C6orf222P0C671 652 aaPredicted RBP16.39■□□□□ 0.21
CNN1-201ENST00000252456 IFNAR1P17181 557 aa16.39■□□□□ 0.21
CNN1-201ENST00000252456 MRPL12P52815 198 aaKnown RBP16.39■□□□□ 0.21
CNN1-201ENST00000252456 AK2P54819 239 aa16.39■□□□□ 0.21
CNN1-201ENST00000252456 STXBP2Q15833 593 aa16.39■□□□□ 0.21
CNN1-201ENST00000252456 PFKFB3Q16875 520 aaPredicted RBP16.39■□□□□ 0.21
CNN1-201ENST00000252456 CCDC62Q6P9F0 684 aa16.39■□□□□ 0.21
CNN1-201ENST00000252456 VSIG10LQ86VR7 867 aa16.39■□□□□ 0.21
CNN1-201ENST00000252456 SCFD2Q8WU76 684 aa16.39■□□□□ 0.21
CNN1-201ENST00000252456 PSTPIP2Q9H939 334 aa16.39■□□□□ 0.21
CNN1-201ENST00000252456 BARHL2Q9NY43 387 aa16.39■□□□□ 0.21
CNN1-201ENST00000252456 PRPF3O43395 683 aaKnown RBP16.38■□□□□ 0.21
CNN1-201ENST00000252456 UBE2SQ16763 222 aa16.38■□□□□ 0.21
CNN1-201ENST00000252456 PPP1R18Q6NYC8 613 aa16.38■□□□□ 0.21
CNN1-201ENST00000252456 DPF3Q92784 378 aa16.38■□□□□ 0.21
CNN1-201ENST00000252456 FERMT2Q96AC1 680 aa16.38■□□□□ 0.21
CNN1-201ENST00000252456 TSEN34Q9BSV6 310 aaKnown RBP16.38■□□□□ 0.21
CNN1-201ENST00000252456 RNF26Q9BY78 433 aaPredicted RBP16.38■□□□□ 0.21
CNN1-201ENST00000252456 Q9Y3F1 56 aa16.38■□□□□ 0.21
CNN1-201ENST00000252456 A0A1W2PQ45 241 aaPredicted RBP16.37■□□□□ 0.21
CNN1-201ENST00000252456 A0A1W2PQY0 241 aa16.37■□□□□ 0.21
CNN1-201ENST00000252456 hCG_1984214I3L0E3 225 aa16.37■□□□□ 0.21
CNN1-201ENST00000252456 EIF3JO75822 258 aaKnown RBP16.37■□□□□ 0.21
CNN1-201ENST00000252456 SCG2P13521 617 aa16.37■□□□□ 0.21
CNN1-201ENST00000252456 ACLYP53396 1101 aa16.37■□□□□ 0.21
CNN1-201ENST00000252456 NAPAP54920 295 aa16.37■□□□□ 0.21
CNN1-201ENST00000252456 MRPS9P82933 396 aaKnown RBP16.37■□□□□ 0.21
CNN1-201ENST00000252456 BEX3Q00994 111 aa16.37■□□□□ 0.21
CNN1-201ENST00000252456 STK3Q13188 491 aa16.37■□□□□ 0.21
CNN1-201ENST00000252456 SNX17Q15036 470 aa16.37■□□□□ 0.21
CNN1-201ENST00000252456 KCNA10Q16322 511 aa16.37■□□□□ 0.21
CNN1-201ENST00000252456 SEPT14Q6ZU15 432 aa16.37■□□□□ 0.21
CNN1-201ENST00000252456 NOL8Q76FK4 1167 aaKnown RBP16.37■□□□□ 0.21
CNN1-201ENST00000252456 ZNF713Q8N859 430 aaPredicted RBP16.37■□□□□ 0.21
CNN1-201ENST00000252456 COPS5Q92905 334 aa16.37■□□□□ 0.21
CNN1-201ENST00000252456 MYH7BA7E2Y1 1941 aa16.37■□□□□ 0.21
CNN1-201ENST00000252456 DYNC1LI2O43237 492 aaPredicted RBP16.37■□□□□ 0.21
CNN1-201ENST00000252456 MYCLP12524 364 aaPredicted RBP16.37■□□□□ 0.21
CNN1-201ENST00000252456 ATN1P54259 1190 aaPredicted RBP16.37■□□□□ 0.21
CNN1-201ENST00000252456 SCRN1Q12765 414 aa16.37■□□□□ 0.21
CNN1-201ENST00000252456 FSCN1Q16658 493 aaKnown RBP16.37■□□□□ 0.21
CNN1-201ENST00000252456 GNASQ5JWF2 1037 aa16.37■□□□□ 0.21
CNN1-201ENST00000252456 PRPF38BQ5VTL8 546 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms