RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 MRPL44Q9H9J2 332 aaKnown RBP24.28■■□□□ 1.48
CLN6-201ENST00000249806 A0A0U1RQJ8 604 aa24.27■■□□□ 1.48
CLN6-201ENST00000249806 PES1O00541 588 aaKnown RBP24.27■■□□□ 1.48
CLN6-201ENST00000249806 RRP1BQ14684 758 aaKnown RBP24.27■■□□□ 1.48
CLN6-201ENST00000249806 ECM1Q16610 540 aa24.27■■□□□ 1.48
CLN6-201ENST00000249806 KIAA0895Q8NCT3 520 aa24.27■■□□□ 1.48
CLN6-201ENST00000249806 ATRIPQ8WXE1 791 aa24.27■■□□□ 1.48
CLN6-201ENST00000249806 P2RX5Q93086 422 aa24.27■■□□□ 1.48
CLN6-201ENST00000249806 WDR24Q96S15 920 aa24.27■■□□□ 1.48
CLN6-201ENST00000249806 SLC39A2Q9NP94 309 aa24.27■■□□□ 1.48
CLN6-201ENST00000249806 EEF1GP26641 437 aaKnown RBP24.27■■□□□ 1.48
CLN6-201ENST00000249806 GNG11P61952 73 aa24.27■■□□□ 1.48
CLN6-201ENST00000249806 KRT79Q5XKE5 535 aa24.27■■□□□ 1.48
CLN6-201ENST00000249806 STK17AQ9UEE5 414 aa24.27■■□□□ 1.48
CLN6-201ENST00000249806 ADGRG1Q9Y653 693 aa24.27■■□□□ 1.48
CLN6-201ENST00000249806 GOLGA6L9A6NEM1 432 aa24.26■■□□□ 1.47
CLN6-201ENST00000249806 GH2P01242 217 aa24.26■■□□□ 1.47
CLN6-201ENST00000249806 TPM1P09493 284 aa24.26■■□□□ 1.47
CLN6-201ENST00000249806 CCNE1P24864 410 aa24.26■■□□□ 1.47
CLN6-201ENST00000249806 ABHD10Q9NUJ1 306 aa24.26■■□□□ 1.47
CLN6-201ENST00000249806 MARCH6O60337 910 aa24.26■■□□□ 1.47
CLN6-201ENST00000249806 URI1O94763 535 aaPredicted RBP24.26■■□□□ 1.47
CLN6-201ENST00000249806 CCDC175P0C221 793 aa24.26■■□□□ 1.47
CLN6-201ENST00000249806 MB21D1Q8N884 522 aa24.26■■□□□ 1.47
CLN6-201ENST00000249806 IRX2Q9BZI1 471 aaPredicted RBP24.26■■□□□ 1.47
CLN6-201ENST00000249806 PCDHA12Q9UN75 941 aa24.26■■□□□ 1.47
CLN6-201ENST00000249806 NDUFB10O96000 172 aa24.25■■□□□ 1.47
CLN6-201ENST00000249806 ZNF507Q8TCN5 953 aa24.25■■□□□ 1.47
CLN6-201ENST00000249806 RAD54LQ92698 747 aa24.25■■□□□ 1.47
CLN6-201ENST00000249806 CSRNP1Q96S65 589 aa24.25■■□□□ 1.47
CLN6-201ENST00000249806 LGALS16A8MUM7 142 aa24.25■■□□□ 1.47
CLN6-201ENST00000249806 ELF2Q15723 593 aa24.25■■□□□ 1.47
CLN6-201ENST00000249806 CNNM4Q6P4Q7 775 aa24.25■■□□□ 1.47
CLN6-201ENST00000249806 CCDC51Q96ER9 411 aa24.25■■□□□ 1.47
CLN6-201ENST00000249806 CAMKK2Q96RR4 588 aa24.25■■□□□ 1.47
CLN6-201ENST00000249806 LZTFL1Q9NQ48 299 aa24.25■■□□□ 1.47
CLN6-201ENST00000249806 STK32BQ9NY57 414 aa24.25■■□□□ 1.47
CLN6-201ENST00000249806 MAGEC2Q9UBF1 373 aaPredicted RBP24.25■■□□□ 1.47
CLN6-201ENST00000249806 ARFGEF1Q9Y6D6 1849 aa24.24■■□□□ 1.47
CLN6-201ENST00000249806 ENTPD3O75355 529 aa24.24■■□□□ 1.47
CLN6-201ENST00000249806 KRT9P35527 623 aa24.24■■□□□ 1.47
CLN6-201ENST00000249806 ERVK-24P63145 666 aa24.24■■□□□ 1.47
CLN6-201ENST00000249806 CC2D2BQ6DHV5 1058 aa24.24■■□□□ 1.47
CLN6-201ENST00000249806 P2RX7Q99572 595 aaKnown RBP24.24■■□□□ 1.47
CLN6-201ENST00000249806 ATRNL1Q5VV63 1379 aa24.24■■□□□ 1.47
CLN6-201ENST00000249806 BICDL2A1A5D9 508 aa24.23■■□□□ 1.47
CLN6-201ENST00000249806 TCP10L2B9ZVM9 353 aa24.23■■□□□ 1.47
CLN6-201ENST00000249806 MEIS2O14770 477 aa24.23■■□□□ 1.47
CLN6-201ENST00000249806 PRKCSHP14314 528 aaPredicted RBP24.23■■□□□ 1.47
CLN6-201ENST00000249806 TAL1P17542 331 aaPredicted RBP24.23■■□□□ 1.47
CLN6-201ENST00000249806 FECHP22830 423 aa24.23■■□□□ 1.47
CLN6-201ENST00000249806 IKQ13123 557 aaPredicted RBP24.23■■□□□ 1.47
CLN6-201ENST00000249806 RBM26Q5T8P6 1007 aaKnown RBP24.23■■□□□ 1.47
CLN6-201ENST00000249806 TUBGCP2Q9BSJ2 902 aa24.23■■□□□ 1.47
CLN6-201ENST00000249806 SEMA6BQ9H3T3 888 aa24.23■■□□□ 1.47
CLN6-201ENST00000249806 A0A1W2PRG0 241 aa24.23■■□□□ 1.47
CLN6-201ENST00000249806 B4DLN1 442 aa24.23■■□□□ 1.47
CLN6-201ENST00000249806 NKRFO15226 690 aaKnown RBP eCLIP24.23■■□□□ 1.479e-7■■■■□ 22.5
CLN6-201ENST00000249806 GCFC2P16383 781 aaKnown RBP24.23■■□□□ 1.47
CLN6-201ENST00000249806 USH1GQ495M9 461 aa24.23■■□□□ 1.47
CLN6-201ENST00000249806 TMEM119Q4V9L6 283 aa24.23■■□□□ 1.47
CLN6-201ENST00000249806 UNC13DQ70J99 1090 aa24.23■■□□□ 1.47
CLN6-201ENST00000249806 SUPT20HQ8NEM7 779 aa24.23■■□□□ 1.47
CLN6-201ENST00000249806 CCDC94Q9BW85 323 aaPredicted RBP24.23■■□□□ 1.47
CLN6-201ENST00000249806 ANO3Q9BYT9 981 aa24.23■■□□□ 1.47
CLN6-201ENST00000249806 TTC26A0AVF1 554 aa24.22■■□□□ 1.47
CLN6-201ENST00000249806 CLRN2A0PK11 232 aa24.22■■□□□ 1.47
CLN6-201ENST00000249806 IDEP14735 1019 aa24.22■■□□□ 1.47
CLN6-201ENST00000249806 CASQ1P31415 396 aa24.22■■□□□ 1.47
CLN6-201ENST00000249806 SPICE1Q8N0Z3 855 aa24.22■■□□□ 1.47
CLN6-201ENST00000249806 GMCL1P1Q8NEA9 526 aa24.22■■□□□ 1.47
CLN6-201ENST00000249806 DDX12PQ92771 950 aa24.22■■□□□ 1.47
CLN6-201ENST00000249806 RAD17O75943 681 aa24.22■■□□□ 1.47
CLN6-201ENST00000249806 TRIM14Q14142 442 aa24.22■■□□□ 1.47
CLN6-201ENST00000249806 ERCC6LQ2NKX8 1250 aa24.22■■□□□ 1.47
CLN6-201ENST00000249806 NOC3LQ8WTT2 800 aaKnown RBP24.22■■□□□ 1.47
CLN6-201ENST00000249806 PVALEFA0A1B0GWK0 134 aa24.21■■□□□ 1.47
CLN6-201ENST00000249806 CNOT6LQ96LI5 555 aaKnown RBP24.21■■□□□ 1.47
CLN6-201ENST00000249806 AMNQ9BXJ7 453 aa24.21■■□□□ 1.47
CLN6-201ENST00000249806 GLT8D2Q9H1C3 349 aa24.21■■□□□ 1.47
CLN6-201ENST00000249806 TMTC1Q8IUR5 882 aa24.2■■□□□ 1.47
CLN6-201ENST00000249806 ACRBPQ8NEB7 543 aa24.2■■□□□ 1.47
CLN6-201ENST00000249806 GMCL1Q96IK5 515 aa24.2■■□□□ 1.47
CLN6-201ENST00000249806 A0A1W2PQC6 194 aa24.2■■□□□ 1.46
CLN6-201ENST00000249806 USP11P51784 963 aa24.2■■□□□ 1.46
CLN6-201ENST00000249806 COBLL1Q53SF7 1204 aa24.2■■□□□ 1.46
CLN6-201ENST00000249806 CENPPQ6IPU0 288 aa24.2■■□□□ 1.46
CLN6-201ENST00000249806 KIFC2Q96AC6 838 aa24.2■■□□□ 1.46
CLN6-201ENST00000249806 CHP1Q99653 195 aa24.2■■□□□ 1.46
CLN6-201ENST00000249806 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.2■■□□□ 1.46
CLN6-201ENST00000249806 SMCHD1A6NHR9 2005 aa24.2■■□□□ 1.46
CLN6-201ENST00000249806 BMP3P12645 472 aa24.19■■□□□ 1.46
CLN6-201ENST00000249806 PPP1R2P41236 205 aa24.19■■□□□ 1.46
CLN6-201ENST00000249806 DNM2P50570 870 aa24.19■■□□□ 1.46
CLN6-201ENST00000249806 SYDE2Q5VT97 1194 aa24.19■■□□□ 1.46
CLN6-201ENST00000249806 FBXO11Q86XK2 927 aa24.19■■□□□ 1.46
CLN6-201ENST00000249806 GLIS3Q8NEA6 775 aa24.19■■□□□ 1.46
CLN6-201ENST00000249806 CGNQ9P2M7 1197 aaKnown RBP24.19■■□□□ 1.46
CLN6-201ENST00000249806 ZBTB12Q9Y330 459 aaPredicted RBP24.19■■□□□ 1.46
CLN6-201ENST00000249806 RGPD3A6NKT7 1758 aaPredicted RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms